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Howarth R.W., Anderson D., Cloern J., Elfring C., Hopkinson C., Lapointe B., Malone T., Marcus N., McGlathery K., Sharpley A. et al..  2000.  Nutrient pollution of coastal rivers, bays and seas. Issues in Ecology. :1-15.
Huang T, Wollheim WM, Jones SH.  2022.  Removal of Fecal Indicator Bacteria by River Networks. Water. 14:617.
Huang X., Morris J.T..  2005.  Distribution of phosphatase activity in marsh sediments along an estuarine salinity gradient.. Marine Ecological Progress Series. 292:75-83.
Huang B., Huang J., Pontius, Jr. R.G., Tu Z..  2018.  Comparison of Intensity Analysis and the land use dynamic degrees to measure land changes outside versus inside the coastal zone of Longhai, China. Ecological Indicators. 89:336-347.
Huang B, Huang J, Pontius RGilmore, Tu Z.  2018.  Comparison of Intensity Analysis and the land use dynamic degrees to measure land changes outside versus inside the coastal zone of Longhai, China. Ecological Indicators. 89:336–347.
Huffaker D., Pontius, Jr. R.G..  2002.  Reconstruction of Historical Land Cover in the Ipswich Watershed.. Biological Bulletin. 203:253-254.
Huffaker D..  2003.  The scale at which land change models are accurate.. B.S.
Hughes J.E, Deegan L.A., Peterson B.J., Holmes R.M., Fry B..  2000.  Nitrogen flow through the food web in the oligohaline zone of a New England estuary.. Ecology. 81:433-452.
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Iwaniec DM, Gooseff M, Suding KN, Johnson DSamuel, Reed DC, Peters DPC, Adams B, Barrett JE, Bestelmeyer BT, Castorani MCN et al..  2021.  Connectivity: insights from the U.S. Long Term Ecological Research Network. Ecosphere. 12
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Jankowski KJo, Johnson K, Sethna L, Julian P, Wymore AS, Shogren AJ, Thomas PK, Sullivan PL, McKnight DM, McDowell WH et al..  2023.  Long-Term Changes in Concentration and Yield of Riverine Dissolved Silicon From the Poles to the Tropics. Global Biogeochemical Cycles. 37:e2022GB007678.
Jezycki K..  2019.  Assessing heavy metal pollution in estuarine systems along the eastern United States in relation to land use land cover changes.. MS
Jin S, Liu Y, Fagherazzi S, Mi H, Qiao G, Xu W, Sun C, Liu Y, Zhao B, Fichot CG.  2021.  River body extraction from sentinel-2A/B MSI images based on an adaptive multi-scale region growth method. Remote Sensing of Environment. 255:112297.
Johnson D.S., Fleeger J.W..  2009.  Weak response of saltmarsh infauna to ecosystem-wide nutrient enrichment and fish predator reduction: A four-year study. Journal of Experimental Marine Biology and Ecology. 373:35-44.
Johnson D.S., Shields J.D., Doucette D., Heard R..  2020.  A climate migrant escapes its parasites. Marine Ecological Progress Series. 641:111-121.
Johnson D.S., Warren R.S., Deegan L.A., Mozdzer T.J..  2016.  Saltmarsh plant responses to eutrophication. Ecological Applications.
Johnson D.S..  2014.  Fiddler on the roof: a northern range extension for the marsh fiddler crab Uca pugnax. Journal of Crustacean Biology. 34:671-673.
Johnson D.S..  2008.  Trophic control of saltmarsh invertebrates. Ph.D.
Johnson D.S., Jessen B.J..  2008.  Do spur-throated grasshoppers, Melanoplus spp. (Orthoptera: Acrididae), exert top-down control on smooth cordgrass Spartinaalterniflora in northern New England? Estuaries and Coasts. 31:912-919.
Johnson D.S., Short M.I..  2013.  Chronic nutrient enrichment increases the density and biomass of the mudsnail, Nassarius obsoletus.. Estuaries and Coasts. 36:28-35.
Johnson D.S..  2011.  High-marsh invertebrates are susceptible to eutrophication. Marine Ecological Progress Series. 438:142-152.
Johnson D.S., Fleeger J.W., Deegan L.A..  2009.  Large-scale manipulations reveal that top-down and bottom-up controls interact to alter habitat utilization by saltmarsh fauna. Marine Ecology Progress Series. 377:33-41.
Johnson DS.  2022.  Are amphipods Orchestia grillus (Bosc, 1802) (Amphipoda: Talitridae) infected with the trematode Levinseniella byrdi (Heard, 1968) drawn to the light? Journal of Crustacean Biology. 42(2)
Johnson D.S., Fleeger J.W., Galván K.A., Moser E.B..  2007.  Worm holes and their space-time continuum: Spatial and temporal variability of macroinfaunal annelids in a northern New England salt marsh. Estuaries and Coasts. 30:226-237.
Johnson D.S., Martinez-Soto K.S., Pant M., Wittyngham S.S, Goetz E.M..  2020.  The fiddler crab Minuca pugnax () (Decapoda: Brachyura: Ocypodidae) reduces saltmarsh algae in its expanded range . Journal of Crustacean Biology.
Johnson D.S., Heard R..  2017.  Bottom-up control of parasites. Ecosphere. 8

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