PIE LTER Publications

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Testa JM, Hopkinson CS, Stӕhr PA, Weston N.  2022.  Estuarine Ecosystem Metabolism. Estuarine Ecology, 3rd. Edition.
Testa J.M., Kemp W.M., Hopkinson C.S., Smith S.V..  2011.  Ecosystem Metabolism. Estuarine Ecology. 2:381-416.
Thomas F, Morris J.T., Wigand C., Sievert S.M..  2019.  Short-term effect of simulated salt marsh restoration by sand-amendment on sediment bacterial communities. PLoS ONE. 14
Thompson J.R., Pacocha S., Pharino C., Klepac-Ceraj V., Hunt D.E., Benoit J., Sarma-Rupavtarm R., Distel D.L., Polz M.F..  2005.  Genotypic diversity within a natural coastal bacterioplankton population.. Science. 307:1311-1313.
Thouin J..  2008.  The biogeochemical influences of nitrate, dissolved oxygen, and dissolved organic carbon on stream nitrate uptake. M.S.
Thouin J.A., Wollheim W.M., Vorosmarty C.J., Jacobs J., McDowell W.H..  2009.  The biogeochemical influences of nitrate, dissolved oxygen, and dissolved organic carbon on stream nitrate uptake.. Journal of the North American Benthological Society. 28:894-907.
Tobias C.R., Cieri M., Peterson B.J., Deegan L.A., Vallino J., Hughes J..  2003.  Processing watershed-derived nitrogen in a well-flushed New England estuary.. Limnology and Oceanography. 48:1766-1778.
Tobias C., Giblin A.E., McClelland J., Tucker J., Peterson B..  2003.  Sediment DIN fluxes and preferential recycling of benthic microalgal nitrogen in shallow macrotidal estuary. Marine Ecological Progress Series. 257:25-36.
Törnqvist TE, Cahoon DR, Morris JT, Day JW.  2021.  Coastal Wetland Resilience, Accelerated Sea‐Level Rise, and the Importance of Timescale. AGU Advances. 2
Törnqvist TE, Cahoon DR, Morris JT, Day JW.  2021.  Coastal Wetland Resilience, Accelerated Sea-Level Rise, and the Importance of Timescale. AGU Advances. 2:e2020AV000334.
Torres R., Fagherazzi S., van Proosdij D., Hopkinson C..  2006.  Salt marsh geomorphology: Physical and ecological effects on landform. Estuarine, Coastal and Shelf Science. 69:309-310.
Travis K..  2010.  Developing validation protocols for a water database. Bachelor's Degree, High Honors
Tsakalakis I., Follows J., Dutkiewicz S., Follett C.L, Vallino J.J..  2021.  Diel light cycles affect phytoplankton competition in the global ocean. BioRxiv. 2021.05.19.444874
Twitchell S..  2003.  The effects of long term nutrient addition on a salt marsh community. B.S.
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Uldahl A.G..  2011.  Nitrate reduction processes and plant N status in Spartina alterniflora dominated salt marshes. MS Degree
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Valentine K..  2013.  The Effect of Physical and Biological Processes on the erosion of Cohesive Sediments. B.S.
Valentine K., Mariotti G., Fagherazzi S..  2014.  Repeated erosion of cohesive sediments with biofilms. Advances in Geosciences. 39:9-14.
VAllini J.J..  2020.  maxEntropyProd/MEP-AutoHetDet: Release of Fortran code associated with paper.
Vallino J.J..  2020.  maxEntropyProd/MEP-AutoHetDet: Release of Fortran code associated with paper.
Vallino J.J., Algar C.K., N. Gonzales F, Huber J.A..  2014.  Use of receding horizon optimal control to solve MaxEP-based biogeochemistry problems. Beyond the Second Law: Entropy Production and Non-Equilibrium Systems. :337-359.
Vallino J., Hopkinson C.S., Garritt R.H..  2005.  Estimating estuarine gross production, community respiration and net ecosystem production: A nonlinear inverse technique.. Ecological Modeling. 187:281-296.
Vallino J.J..  2010.  Ecosystem biogeochemistry considered as a distributed metabolic network ordered by maximum entropy production.. Philosophical Transactions of The Royal Society B. 365:1417-1427.
Vallino J.J..  2011.  Differences and implications in biogeochemistry from maximizing entropy production locally versus globally. Earth System Dynamics. 2:69-85.
Vallino J., Hopkinson C.S., Garritt R., Tucker J..  1999.  A non-linear inverse technique to estimate estuarine ecosystem metabolism from whole system oxygen measurements.. Proceedings of the 3rd International Symposium on Ecohydraulics.
Vallino JJ, Tsakalakis I.  2020.  Phytoplankton Temporal Strategies Increase Entropy Production in a Marine Food Web Model. Entropy. 22:1249.

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