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Hopkinson C.S., Cai W-J., Hu X..  2012.  Carbon sequestration in wetland dominated coastal systems — a global sink of rapidly diminishing magnitude. Current Opinion in Environmental Sustainability. 4:186-194.
Wollheim W.M., Green M.B., Pellerin B.A., Morse N.B., Hopkinson C.S..  2013.  Causes and Consequences of Ecosystem Service Regionalization in a Coastal Suburban Watershed. Estuaries and Coasts.
Bauer J.E., Cai W-J., Raymond P.A, Bianchi T.S., Hopkinson C.S., Regnier P.A.G..  2013.  The changing carbon cycle of the coastal ocean.. Nature. 504:61-70.
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Giblin A.E., Weston N.B., Banta G.T., Tucker J., Hopkinson C.S..  2010.  The effects of salinity on nitrogen losses from an oligohaline estuarine sediment. Estuaries and Coasts. 33:1054-1068.
Weston N.B., Giblin A.E., Banta G., Hopkinson C.S., Tucker J..  2010.  The effects of varying salinity on ammonium exchange in estuarine sediments of the Parker River, Massachusetts.. Estuaries and Coasts. 33:985-1003.
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Spivak A.C., Sanderman J., Bowen J.L., Canuel E.A., Hopkinson C.S..  2019.  Global-change controls on soil-carbon accumulation and loss in coastal vegetated ecosystems. Nature Geoscience. 12:685-692.
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Yang Q., Tian H., Friedrichs M.A.M., Hopkinson C.S., Lu C., Najjar R.G..  2015.  Increased nitrogen export from eastern North America to the Atlantic Ocean due to climatic and anthropogenic changes during 1901–2008. Journal of Geophysical Research: Biogeosciences. 120:1046-1068.
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Hopkinson C.S., Morris J.T., Fagherazzi S., Wollheim W.M., Raymond P.A.  2018.  Lateral Marsh Edge Erosion as a Source of Sediments for Vertical Marsh Accretion. Journal of Geophysical Research.
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Crump B.C., Hopkinson C.S., Sogin M.L., Hobbie J.H..  2004.  Microbial biogeography along an estuarine salinity gradient: the combined influences of bacterial growth and residence time.. Applied and Environmental Microbiology. 70:1494-1505.
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Gooseff M., Benson D.A., Briggs M.A., Weaver M., Wollheim W.M., Peterson B.J., Hopkinson C.S..  2011.  Residence time distribution in surface transient storage zones in streams: Estimation via signal deconvolution. Water Resources Research. 47:7pp.
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Morris J.T., Sundberg K., Hopkinson C.S..  2013.  Salt marsh primary production and its responses to relative sea level and nutrients. Oceanography. 26:78-84.
Wilson C.A., Hughes Z.J., FitzGerald D.M., Hopkinson C.S., Valentine V., Kolker A.S..  2014.  Saltmarsh pool and tidal creek morphodynamics: Dynamic equilibrium of northern latitude saltmarshes? Geomorphology. :99-115.
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Hopkinson C.S., Lugo A.E., Alber M., Covich A., van Bloem S..  2008.  Understanding and forecasting the effects of sea level rise and intense windstorms on coastal and upland ecosystems: the need for a continental-scale netowrk of observatories. Frontiers in Ecology and Environment. 6:255-263.