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Book Chapter
Buchsbaum R.N., Wigand C.A..  2012.  Adaptive management and monitoring as fundamental tools to effective salt marsh restoration.. Restoring Tidal Flow to Salt Marshes: A Synthesis of Science and Management in New England (USA).
Morris J.T., Christian R.R., Ulanowicz R.E..  2005.  Analysis of size and complexity of randomly constructed food webs by information theoretic metrics.. Aquatic Food Webs: an Ecosystem Approach. :73-85.
Morris J.T., Edwards J., Crooks S., Reyes E..  2012.  Assessment of Carbon Sequestration Potential in Coastal Wetlands.. Recarbonization of the Bioshpere: Ecosystem and Global Carbon Cycle. . :517-531.
Buchsbaum R., Deegan L., Garritt R..  2002.  Changes in the fish comunity of Plum Island Sound from 1965 through 1994.. In: The marine resources of the Parker River-Plum Island Sound estuary: An update after 30 years..
Vorosmarty C.J, Li C., Sun J., Dai Z..  1998.  Drainage basins, river systems, and anthropogenic change: the Chinese example. Asian Change in the Context of Global CHange: Impacts of Natural and Anthropogenic Changes in Asia on Global Biogeochemical Cycles. :210-244.
Fagherazzi S., FitzGerald D.M., Fulweiler R.W., Hughes Z., Wiberg P.L., McGlathery K.J., Morris J.T., Tolhurst T.J, Deegan L.A., Johnson D.S. et al..  2022.  Ecogeomorphology of Salt Marshes. Treatise on Geomorphology (Second Edition). :445–462.
Fagherazzi S., FitzGerald D.M., Fulweiler R.W., Hughes Z., Wiberg P.L., McGlathery K.J., Morris J.T., Tolhurst T.J., Deegan L.A., Johnson D.S..  2013.  Ecogeomorphology of Salt Marshes. Treatise on Geomorphology. 12:180-200.
Fagherazzi S., FitzGerald D.M., Fulweiler R.W., Hughes Z., Wiberg P.L., McGlathery K.J., Morris J.T., Tolhurst T.J., Deegan L.A., Johnson D.S..  2013.  Ecogeomorphology of Tidal Flats. Treatise on Geomorphology. 12:201-220.
Mendelssohn I.A, Morris J.T..  2000.  Ecophysiological controls on the growth of Spartina alterniflora. Concepts and Controversies in Tidal Marsh Ecology. :59-80.
Testa J.M., Kemp W.M., Hopkinson C.S., Smith S.V..  2011.  Ecosystem Metabolism. Estuarine Ecology. 2:381-416.
Deegan L.A., Buchsbaum R..  2005.  The effect of habitat loss and degradation on fisheries.. The Decline of Fisheries Resources in New England: Evaluating the Impact of Overfishing, Contamination, and Habitat Degradation. MITSG 05-5:67-96.
Morris J.T.  2000.  Effects of sea level anomalies on estuarine processes.. Estuarine Science: A Synthetic Approach to Research and Practice. :107-127.
Deegan L.A..  2002.  Effects of trawling and dredging on seafloor habitat.. Committee on Ecosystem Effects of Fishing<br/>. :107pp..
Morris J.T..  2007.  Estimating net primary production of salt marsh macrophytes. Principles and Standards for Measuring Primary Production. :106-119.
Testa JM, Hopkinson CS, Stӕhr PA, Weston N.  2022.  Estuarine Ecosystem Metabolism. Estuarine Ecology, 3rd. Edition.
Hopkinson C., Smith E..  2004.  Estuarine respiration: an overview of benthic, pelagic, and whole system respiration . Respiration in Aquatic Ecosystems. :122-146.
Hobbie J.E.  2000.  Estuarine Science: The key to progress in coastal ecological research. Estuarine Science: A Synthetic Approach to Research and Practice. :1-16.
Mudd S.M., Fagherazzi S., Morris J.T., Furbish D.J..  2004.  Flow, sedimentation, and biomass production on a vegetated salt marsh in South Carolina: toward a predictive model of marsh morphologic and ecologic evolution.. The Ecogeomorphology of Tidal Marshes. :165-187.
Wollheim W.M..  2016.  From Headwaters to rivers to river networks: scaling in stream ecology. Streams In a Changing Environment. :349-388.
Runfola D.M., Polsky C., Giner N., Pontius, Jr. R.G., Nicolson C..  2013.  Future Suburban Development and the Environmental Implications of Lawns: A Case Study in New England, USA. Modeling of Land-use and Ecological Dynamics. :119-141.

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