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Fry B., Hopkinson C., Nolin A., Wainright S..  1998.  13C/12C composition of marine dissolved organic carbon.. Chemical Geology. 152:113-118.
Fry B., Cieri M., Hughes J., Tobias C., Deegan L.A., Peterson B..  2008.  Stable isotope monitoring of benthic-pelagic coupling with salt marsh fish. Marine Ecology Progress Series. 369:193-204.
Freidman K..  2013.  The effects of nitrate fertilization on the physiology of a common salt marsh cordgrass species, Spartina alterniflora. M.S.
Freeman C.J., Haas H., Warren S., Deegan L.A., Logan J..  2004.  What makes mummichogs grow? The relationship between growth rates and gut contents of Fundulus heteroclitus held in enclosures along a salinity gradient in a New England salt marsh. New England Estuarine Research Society (NEERS).
Frank H., Mather M.E., Muth R.M., Pautzke S.M., Smith J.M., Finn J.T., McCormick S.D..  2009.  What is 'fallback': metrics needed to assess telemetry tag effects on anadromous fish behaviour. Hydrobiologia. 35:237-249.
Frank H..  2009.  Evaluation of pre-spawning movements of anadromous alewives in the Ipswich River using radiotelemetry. M.S.
Frank H.J., Mather M.E., Muth R.M., Pautzke S.M., Smith J.M., Finn J.T..  2009.  The Adopt-a-Herring Program as a Fisheries Conservation Tool. Fisheries. 34:496-507.
Frank H.F., Mather M.E., Smith J.M., Muth R.M., Finn J.T..  2011.  Role of origin and release location in pre-spawning movements of anadromous alewives. Fisheries Management and Ecology. 18:12-14.
Forbrich I., Giblin A.E., Hopkinson C.S..  2018.  Constraining Marsh Carbon Budgets Using Long-Term C Burial and Contemporary Atmospheric CO2 Fluxes. Journal of Geophysical Research: Biogeosciences. 123:867-878.
Forbrich I., Giblin A.E..  2015.  Marsh-atmosphere exchange of CO2 in a New England salt marsh. Journal of Geophysical Research- Biogeosciences. 120
Foo K., Martin D., Wool C., Polsky C..  2013.  The production of urban vacant land: relational placemaking in Boston, MA neighborhoods.. Cities and the Environment. 35:156-163.
Fleeger J.W., Johnson D.S., Galván K.A., Deegan L.A..  2008.  Top-down and bottom-up control of infauna varies across the saltmarsh landscape. Journal of Experimental Marine Biology and Ecology. 357:20-34.
Fisher T.R, Correll D., Costanza R., Hollibaugh J., Hopkinson C., Howarth R., Rabalais N., Richey J., Vorosmarty C., Wiegert R..  2000.  Synthesizing drainage basin inputs to coastal systems.. Estuarine Science: A Synthetic Approach to Research and Practice. :81-105.
Filoso S., Vallino J.J, Hopkinson C., Rastetter E., Claessens L..  2004.  Modeling Nitrogen Transport in the Ipswich River Basin, Massachusetts, Using HSPF.. Journal of the American Water Resources Association. 40:1365-1384.
Ferry K.H., Mather M.E..  2012.  Spatial and temporal diet patterns of young adult and subadult striped bass feeding in Massachusetts estuaries: trends across scales.. Marine and Coastal Fisheries: Dynamics, Management, and Ecosystem Science. 4:30-45.
Ferry K..  2003.  Factors driving distribution of migratory striped bass across Massachusetts estuaries: predator-prey interactions and implications for multispecies management.. Natural Resource Conservation. M.S.
Fernandes A..  2017.  The impact of extreme storm surges on Mid Atlantic coastal forests. MS
Fernandes A., Rollinson C.R., Kearney W.S., Dietze M.C., Fagherazzi S..  2018.  Declining radial growth response of coastal forests to hurricanes and nor’easters. Journal of Geophysical Research. 123:832-849.
Fennel K., Brady D., DiToro D., Fulweiler R.W., Gardner W.S., Giblin A., McCarthy M.J., Rao A., Seitzinger S., Thouvenot-Korppoo M. et al..  2009.  Modeling denitrification in aquatic sediments. Biogeochemistry. 93:159-178.
Fedorko E.J., Pontius, Jr. R.G., Aldrich S.P., Claessens L., Hopkinson C., Wollheim W.M..  2005.  Spatial distribution of land type in regression models of pollutant loading. Journal of Spatial Hydrology. 5:60-80.
Farber S, Costanza D., Childers D., Erikson J., Gross K., Grove M., Hopkinson C., Kahn J., Pincetl S., Troy A. et al..  2006.  Linking ecology and economics for ecosystem management. BioScience. 56:121-134.
S. Fantroussi E, Urakawa H., Bernhard A.E., Kelly J.J., Noble P.A., Stahl D.A..  2003.  Direct profiling of environmental microbial populations by thermal dissociation analysis of native ribosomal RNAs hybridized to oligonucleotide microarrays.. Applied Environmental Microbiology. 69:2377-2382.
Fagherazzi S., Mariotti G., Banks A.T., Morgan E.J., Fulweiler R.W..  2014.  The relationships among hydrodynamics, sediment distribution, and chlorophyll in a mesotidal estuary.. Estuarine and Coastal Shelf Science. 144:54-64.
Fagherazzi S., FitzGerald D.M., Fulweiler R.W., Hughes Z., Wiberg P.L., McGlathery K.J., Morris J.T., Tolhurst T.J., Deegan L.A., Johnson D.S..  2013.  Ecogeomorphology of Tidal Flats. Treatise on Geomorphology. 12:201-220.
Fagherazzi S., Wiberg P.L., Temmerman S., Struyf E., Zhao Y., Raymond P.A.  2013.  Fluxes of water, sediments, and biogeochemical compounds in salt marshes. Ecological Processes.

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