PIE LTER Publications

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Vallino J., Hopkinson C.S., Garritt R.H..  2005.  Estimating estuarine gross production, community respiration and net ecosystem production: A nonlinear inverse technique.. Ecological Modeling. 187:281-296.
Morris J.T..  2007.  Estimating net primary production of salt marsh macrophytes. Principles and Standards for Measuring Primary Production. :106-119.
Pontius, Jr. R.G., Li X..  2008.  Estimating the land transition matrix based on erroneous maps. Conference proceedings of Studying, Modeling and Sense Making of Planet Earth. :8.
Pontius, Jr. R.G., Agrawal A., Huffaker D..  2003.  Estimating the uncertainty of land-cover extrapolations while constructing a raster map from tabular data.. Journal of Gegraphical Systems. 5:253-273.
Vallino J.J, Hopkinson C.S..  1998.  Estimation of dispersion and characteristic mixing times in Plum Island Sound Estuary. Estuarine, Coastal and Shelf Science. 46:333-350.
Hopkinson C., Smith E..  2004.  Estuarine respiration: an overview of benthic, pelagic, and whole system respiration . Respiration in Aquatic Ecosystems. :122-146.
Hobbie J..  2000.  Estuarine Science: A Synthetic Approach to Research and Practice. :539.
Hobbie J.E.  2000.  Estuarine Science: The key to progress in coastal ecological research. Estuarine Science: A Synthetic Approach to Research and Practice. :1-16.
Smith J.S., Mather M.E., Frank H.J., Muth R.M., Finn J.T., McCormick S.D..  2009.  Evaluation of a gastric radio tag insertion technique for anadromous river herring.. North American Journal of Fisheries Management. 29:367-377.
Frank H..  2009.  Evaluation of pre-spawning movements of anadromous alewives in the Ipswich River using radiotelemetry. M.S.
Haas H.L., Freeman C.J., Logan J.M., Deegan L, Gaines E.F..  2009.  Examining mummichog growth and movement: Are some individuals making intra-season migrations to optimize growth? Journal of Experimental Marine Biology and Ecology. 369:8-16.
Pontius, Jr. R.G., Connors J..  2006.  Expanding the conceptual, mathematical, and practical methods for map comparison. Conference proceedings of the meeting of Spatial Accuracy 2006. :16.
Miller E.E..  2006.  Experimental nutrient enrichment of a New England salt marsh: plant productivity and community composition responses. M.S.
Lee W.M.  2004.  Factors affecting sedimentation patterns of a tidal marsh in Plum Island Sound Estuary, Massachusetts.. Department of Geology. B.S.
Ferry K..  2003.  Factors driving distribution of migratory striped bass across Massachusetts estuaries: predator-prey interactions and implications for multispecies management.. Natural Resource Conservation. M.S.
Chaisson C..  2012.  Factors influencing stem density in creekbank Spartina alterniflora in a New England salt marsh. BA:24.
Kearns P..  2017.  Factors that affect the composition and activity of salt marsh microbial communities: the effect of nutrient loading and diel cycles. PhD
Zhang X., Leonardi N., Donatelli C., Fagherazzi S..  2019.  Fate of cohesive sediments in a marsh-dominated estuary. Advances in Water Resources. 125:32-40.
Nelson J.A., Johnson D.S., Deegan L.A., Spivak A.C., Sommer N.R..  2018.  Feedbacks Between Nutrient Enrichment and Geomorphology Alter Bottom-Up Control on Food Webs. Ecosystems.
Haines J..  2001.  The feeding ecology of mummichog and Atlantic silversides in the Rowley River.. B.S.
Johnson D.S., Martinez-Soto K.S., Pant M., Wittyngham S.S, Goetz E.M..  2020.  The fiddler crab Minuca pugnax () (Decapoda: Brachyura: Ocypodidae) reduces saltmarsh algae in its expanded range . Journal of Crustacean Biology.
Johnson D.S., Crowley C., Longmire K., Nelson J.A., Williams B., Wittyngham S..  2019.  The fiddler crab, Minuca pugnax, follows Bergmann’s rule.. Ecology and Evolution. 9:14489-14497.
Johnson D.S..  2014.  Fiddler on the roof: a northern range extension for the marsh fiddler crab Uca pugnax. Journal of Crustacean Biology. 34:671-673.
Acinas S.G., Klepac-Ceraj K., Hunt D.E., Pharino C., Ceraj C., Distel D.L., Polz M.F..  2004.  Fine-scale phylogenetic architecture of a complex bacterial community.. Nature. 430:551-554.
Smith J.M., Wells S.P., Mather M.E., Muth R.M..  2013.  Fish biodiversity sampling in stream ecosystems: a process for evaluating the appropriate types and amount of gear.. Aquatic Conservation: Marine and Freshwater Ecosystems.