PIE LTER Publications

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Vallino J..  2000.  Improving marine ecosystem models: Use of data assimilation and mesocosm experiments.. Journal of Marine Research. 58:117-164.
Vallino J., Hopkinson C.S., Garritt R.H..  2005.  Estimating estuarine gross production, community respiration and net ecosystem production: A nonlinear inverse technique.. Ecological Modeling. 187:281-296.
Vallino J.J..  2010.  Ecosystem biogeochemistry considered as a distributed metabolic network ordered by maximum entropy production.. Philosophical Transactions of The Royal Society B. 365:1417-1427.
Vallino J.J, Hopkinson C.S..  1998.  Estimation of dispersion and characteristic mixing times in Plum Island Sound Estuary. Estuarine, Coastal and Shelf Science. 46:333-350.
Vallino J.J..  2003.  Modeling microbial consortiums as distributed metabolic networks. Biological Bulletin. 204:174-179.
Vallino J.J..  2020.  maxEntropyProd/MEP-AutoHetDet: Release of Fortran code associated with paper.
Vallino J.J., Algar C.K., N. Gonzales F, Huber J.A..  2014.  Use of receding horizon optimal control to solve MaxEP-based biogeochemistry problems. Beyond the Second Law: Entropy Production and Non-Equilibrium Systems. :337-359.
Vallino J.J..  2011.  Differences and implications in biogeochemistry from maximizing entropy production locally versus globally. Earth System Dynamics. 2:69-85.
Vallino JJ, Tsakalakis I.  2020.  Phytoplankton Temporal Strategies Increase Entropy Production in a Marine Food Web Model. Entropy. 22:1249.
Vallino J.J., Huber J.A..  2018.  Using Maximum Entropy Production to Describe Microbial Biogeochemistry Over Time and Space in a Meromictic Pond. Frontiers in Environmental Science.
Vallino J.J..  2020.  maxEntropyProd/MEP-SidersPond: Release of Fortran code associated with published paper.
VAllini J.J..  2020.  maxEntropyProd/MEP-AutoHetDet: Release of Fortran code associated with paper.
Valentine K., Mariotti G., Fagherazzi S..  2014.  Repeated erosion of cohesive sediments with biofilms. Advances in Geosciences. 39:9-14.
Valentine K..  2013.  The Effect of Physical and Biological Processes on the erosion of Cohesive Sediments. B.S.
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Twitchell S..  2003.  The effects of long term nutrient addition on a salt marsh community. B.S.
Tsakalakis I., Follows J., Dutkiewicz S., Follett C.L, Vallino J.J..  2021.  Diel light cycles affect phytoplankton competition in the global ocean. BioRxiv. 2021.05.19.444874
Travis K..  2010.  Developing validation protocols for a water database. Bachelor's Degree, High Honors
Torres R., Fagherazzi S., van Proosdij D., Hopkinson C..  2006.  Salt marsh geomorphology: Physical and ecological effects on landform. Estuarine, Coastal and Shelf Science. 69:309-310.
Törnqvist TE, Cahoon DR, Morris JT, Day JW.  2021.  Coastal Wetland Resilience, Accelerated Sea‐Level Rise, and the Importance of Timescale. AGU Advances. 2
Törnqvist TE, Cahoon DR, Morris JT, Day JW.  2021.  Coastal Wetland Resilience, Accelerated Sea-Level Rise, and the Importance of Timescale. AGU Advances. 2:e2020AV000334.
Tobias C., Giblin A.E., McClelland J., Tucker J., Peterson B..  2003.  Sediment DIN fluxes and preferential recycling of benthic microalgal nitrogen in shallow macrotidal estuary. Marine Ecological Progress Series. 257:25-36.
Tobias C.R., Cieri M., Peterson B.J., Deegan L.A., Vallino J., Hughes J..  2003.  Processing watershed-derived nitrogen in a well-flushed New England estuary.. Limnology and Oceanography. 48:1766-1778.
Thouin J..  2008.  The biogeochemical influences of nitrate, dissolved oxygen, and dissolved organic carbon on stream nitrate uptake. M.S.
Thouin J.A., Wollheim W.M., Vorosmarty C.J., Jacobs J., McDowell W.H..  2009.  The biogeochemical influences of nitrate, dissolved oxygen, and dissolved organic carbon on stream nitrate uptake.. Journal of the North American Benthological Society. 28:894-907.

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