PIE LTER Publications

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Vallino J.J., Huber J.A..  2018.  Using Maximum Entropy Production to Describe Microbial Biogeochemistry Over Time and Space in a Meromictic Pond. Frontiers in Environmental Science.
Vallino J., Hopkinson C.S., Garritt R.H..  2005.  Estimating estuarine gross production, community respiration and net ecosystem production: A nonlinear inverse technique.. Ecological Modeling. 187:281-296.
Vallino J.J..  2010.  Ecosystem biogeochemistry considered as a distributed metabolic network ordered by maximum entropy production.. Philosophical Transactions of The Royal Society B. 365:1417-1427.
Vallino J.J., Algar C.K..  2016.  Thermodynamics of Marine Biogeochemical Cycles: Lotka Revisited. Annual Review of Marine Science. 8:333-356.
Vallino J., Hopkinson C.S., Garritt R., Tucker J..  1999.  A non-linear inverse technique to estimate estuarine ecosystem metabolism from whole system oxygen measurements.. Proceedings of the 3rd International Symposium on Ecohydraulics.
Vallino J..  2000.  Improving marine ecosystem models: Use of data assimilation and mesocosm experiments.. Journal of Marine Research. 58:117-164.
Vallino J.J., Algar C.K., N. Gonzales F, Huber J.A..  2014.  Use of receding horizon optimal control to solve MaxEP-based biogeochemistry problems. Beyond the Second Law: Entropy Production and Non-Equilibrium Systems. :337-359.
Valentine K., Mariotti G., Fagherazzi S..  2014.  Repeated erosion of cohesive sediments with biofilms. Advances in Geosciences. 39:9-14.
Valentine K..  2013.  The Effect of Physical and Biological Processes on the erosion of Cohesive Sediments. B.S.
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Uldahl A.G..  2011.  Nitrate reduction processes and plant N status in Spartina alterniflora dominated salt marshes. MS Degree
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Twitchell S..  2003.  The effects of long term nutrient addition on a salt marsh community. B.S.
Tsakalakis I., Follows J., Dutkiewicz S., Follett C.L, Vallino J.J..  2021.  Diel light cycles affect phytoplankton competition in the global ocean. BioRxiv. 2021.05.19.444874
Travis K..  2010.  Developing validation protocols for a water database. Bachelor's Degree, High Honors
Torres R., Fagherazzi S., van Proosdij D., Hopkinson C..  2006.  Salt marsh geomorphology: Physical and ecological effects on landform. Estuarine, Coastal and Shelf Science. 69:309-310.
Tobias C.R., Cieri M., Peterson B.J., Deegan L.A., Vallino J., Hughes J..  2003.  Processing watershed-derived nitrogen in a well-flushed New England estuary.. Limnology and Oceanography. 48:1766-1778.
Tobias C., Giblin A.E., McClelland J., Tucker J., Peterson B..  2003.  Sediment DIN fluxes and preferential recycling of benthic microalgal nitrogen in shallow macrotidal estuary. Marine Ecological Progress Series. 257:25-36.
Thouin J..  2008.  The biogeochemical influences of nitrate, dissolved oxygen, and dissolved organic carbon on stream nitrate uptake. M.S.
Thouin J.A., Wollheim W.M., Vorosmarty C.J., Jacobs J., McDowell W.H..  2009.  The biogeochemical influences of nitrate, dissolved oxygen, and dissolved organic carbon on stream nitrate uptake.. Journal of the North American Benthological Society. 28:894-907.
Thompson J.R., Pacocha S., Pharino C., Klepac-Ceraj V., Hunt D.E., Benoit J., Sarma-Rupavtarm R., Distel D.L., Polz M.F..  2005.  Genotypic diversity within a natural coastal bacterioplankton population.. Science. 307:1311-1313.
Thomas F, Morris J.T., Wigand C., Sievert S.M..  2019.  Short-term effect of simulated salt marsh restoration by sand-amendment on sediment bacterial communities. PLoS ONE. 14
Testa J.M., Kemp W.M., Hopkinson C.S., Smith S.V..  2011.  Ecosystem Metabolism. Estuarine Ecology. 2:381-416.
Taylor R..  2017.  Using geomorphology and animal “individuality” to understand ‘scape-scale predator distributions. M.S.
Tada T..  2001.  Land use and nitrate loading in small stream catchments. M.S.
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Sweeney J., Deegan L., Garritt R..  1998.  Population size and site fidelity of Fundulus heteroclitus in a macrotidal saltmarsh creek. Biological Bulletin. 195:238-239.
Sundareshwar P.V., Morris J.T., Pellechia P.J., Cohen H.J., Porter D.E., Jones B.C..  2001.  Occurrence and Ecological Implications of Pyrophosphate in Estuaries. Limnology and Oceanography. 46:1570-1577.

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