PIE LTER Publications

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2004
Lee W.M.  2004.  Factors affecting sedimentation patterns of a tidal marsh in Plum Island Sound Estuary, Massachusetts.. Department of Geology. B.S.
Acinas S.G., Klepac-Ceraj K., Hunt D.E., Pharino C., Ceraj C., Distel D.L., Polz M.F..  2004.  Fine-scale phylogenetic architecture of a complex bacterial community.. Nature. 430:551-554.
Nielsen J.L., Schramm A., Bernhard A.E., EnghG.J. vanden, Stahl D.A..  2004.  Flow Cytometry-Assisted Cloning of Specific Sequence Motifs from Complex 16S rRNA Gene Libraries. Applied and Environmental Microbiology. 70:7550-7554.
Mudd S.M., Fagherazzi S., Morris J.T., Furbish D.J..  2004.  Flow, sedimentation, and biomass production on a vegetated salt marsh in South Carolina: toward a predictive model of marsh morphologic and ecologic evolution.. The Ecogeomorphology of Tidal Marshes. :165-187.
Klepac-Ceraj V., Bahr M., Crump B.C., Teske A.P., Hobbie J.E., Poltz M.F..  2004.  High overall diversity and dominance of microdiverse relationships in salt marsh sulfate-reducing bacteria.. Environmental Microbiology. 6:686-698.
Pellerin B.A.  2004.  The influence of urbanization on runoff generation and stream chemistry in Massachusetts watersheds.. Ph.D.
Clement J., Holmes R.M., Peterson B.J., Pinlay G..  2004.  Isotopic investigation of nitrogen retention in a riparian ecosystem.. Journal of Applied Ecology. 40:1035-1048.
Crump B.C., Hopkinson C.S., Sogin M.L., Hobbie J.H..  2004.  Microbial biogeography along an estuarine salinity gradient: the combined influences of bacterial growth and residence time.. Applied and Environmental Microbiology. 70:1494-1505.
Filoso S., Vallino J.J, Hopkinson C., Rastetter E., Claessens L..  2004.  Modeling Nitrogen Transport in the Ipswich River Basin, Massachusetts, Using HSPF.. Journal of the American Water Resources Association. 40:1365-1384.
Williams M., Hopkinson C., Rastetter E., Vallino J..  2004.  N budgets and aquatic uptake in the Ipswich River basin, northeastern Massachusetts.. Water Resources Research. 40:1-12.
Salgado J., Costa M-J., Cabral H., Deegan L..  2004.  Nekton use of salt marsh creeks in the upper Tejo Estuary.. Estuaries. 27:818-825.
Pellerin B.A., Wollheim W., Hopkinson C., McDowell W., Williams M., Vorosmarty C., Daley M..  2004.  Role of wetlands and developed land use on dissolved organic nitrogen concentrations and DON / TDN in northeastern U.S. rivers and streams. Limnology and Oceanography. 49:910-918.
Fagherazzi S., Torres R., Hopkinson C., vanProosdij D..  2004.  The Salt Marsh Geomorphology: Physical and Ecological Effects on Landform. AGU Chapman Conference. 86:57-58.
Pontius, Jr. R.G., Huffaker D., Denman K..  2004.  Useful techniques of validation for spatially explicit land-change models.. Ecological Modeling. 179:445-461.
Versluis A.J., Pontius, Jr. R.G., Malizia N.R..  2004.  Visualizing the rate at which the accuracy of a land change prediction decays.. Conference proceedings of the meeting of the University Consortium for Geographic Information Science. :29.
Freeman C.J., Haas H., Warren S., Deegan L.A., Logan J..  2004.  What makes mummichogs grow? The relationship between growth rates and gut contents of Fundulus heteroclitus held in enclosures along a salinity gradient in a New England salt marsh. New England Estuarine Research Society (NEERS).
2003
Koop-Jakobsen K..  2003.  Ammonium dynamics in tidal salt marshes - an experimental study of ammonium adsorption, tidal flushing and ammonium volatilization. M.S.:63.
Walter J.F., Overton A.S., Ferry K.H., Mather M.E..  2003.  Atlantic coast feeding habits of striped bass: a synthesis of data supporting a comprehensive coast-wide understanding of the trophic biology. Fisheries Management and Ecology. 10:349-360.
Holden M, Lippitt C., Pontius, Jr. R.G., Williams C..  2003.  Building a database of historic land cover to detect landscape change.. Biological Bulletin. 205:257-258.
S. Fantroussi E, Urakawa H., Bernhard A.E., Kelly J.J., Noble P.A., Stahl D.A..  2003.  Direct profiling of environmental microbial populations by thermal dissociation analysis of native ribosomal RNAs hybridized to oligonucleotide microarrays.. Applied Environmental Microbiology. 69:2377-2382.
Kratz T.K., Deegan L.A., Harmon M.E., Lauenroth W.K..  2003.  Ecological Variability in Space and Time: Insights Gained from the US LTER Program . BioSciences. 53:57-67.
Raymond P.A, Hopkinson C.S..  2003.  Ecosystem modulation of dissolved carbon age in a temperate marsh dominated estuary.. Ecosystems. 6:694-705.
Twitchell S..  2003.  The effects of long term nutrient addition on a salt marsh community. B.S.
Pontius, Jr. R.G., Agrawal A., Huffaker D..  2003.  Estimating the uncertainty of land-cover extrapolations while constructing a raster map from tabular data.. Journal of Gegraphical Systems. 5:253-273.
Ferry K..  2003.  Factors driving distribution of migratory striped bass across Massachusetts estuaries: predator-prey interactions and implications for multispecies management.. Natural Resource Conservation. M.S.

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