PIE LTER Publications

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Book Chapter
Vorosmarty C., Peterson B..  2000.  Macro-scale models of water and nutrient flux to the coastal zone. Estuarine Science: A Synthetic Approach to Research and Practice. :43-80.
Morris JT, Cahoon DR, Callaway JC, Craft C, Neubauer SC, Weston NB.  2021.  Marsh Equilibrium Theory: Implications for Responses to Rising Sea Level. Salt Marshes: Function, Dynamics, and Stresses. :157–177.
Fagherazzi S., Leonardi N., Carniello L., Canestrelli A., D’Alpaos A., Nardin W..  2022.  Modelling Tidal Environments. Treatise on Geomorphology (Second Edition). :62–82.
Polsky C., Assefa S., Del Vecchio K., Hill T., Merner L., Tercero I., Pontius, Jr. R.G..  2009.  The Mounting Risk of Drought in a Humid Landscape: Structure and Agency in Suburbanizing Massachusetts. . Sustainable Communities on a Sustainable Planet: The Human-Environment Regional Observatory Project.
Giblin A.E..  2015.  Mysteries in the marsh. Long-Term Ecological Research: Changing the Nature of Scientists.
Journal Article
Aldwaik S., Pontius, Jr. R.G..  2013.  Map errors that could account for deviations from a uniform intensity of land change. International Journal of Geographical Information Science .
Krest J.M, Moore W.S., Gardner L.R., Morris J.T..  2000.  Marsh nutrient export supplied by ground water discharge: Evidence from radium measurements. Global Biogeochemical Cycles. 14:167-176.
Forbrich I., Giblin A.E..  2015.  Marsh-atmosphere exchange of CO2 in a New England salt marsh. Journal of Geophysical Research- Biogeosciences. 120
Holmes R.M., McClelland J., Sigman D.M., Fry B., Peterson B.J..  1998.  Measuring 15N-NH4 in marine, estuarine, and freshwaters: an adaptation of the ammonium diffusion method for samples with low ammonium concentrations.. Marine Chemistry. 60:235-243.
Runfola D.S.M., Pontius, Jr. R.G..  2013.  Measuring the temporal instability of land change using the Flow matrix. International Journal of Geographical Information Science.
Bulseco A.N., Vineis J.H., Murphy A.E., Spivak A.C., Giblin A.E., Tucker J., Bowen J.L..  2019.  Metagenomics coupled with biogeochemical rates measurements provide evidence that nitrate addition stimulates respiration in salt marsh sediments.. Limnology and Oceanography. 65
Bulseco AN, Vineis JH, Murphy AE, Spivak AC, Giblin AE, Tucker J, Bowen JL.  2020.  Metagenomics coupled with biogeochemical rates measurements provide evidence that nitrate addition stimulates respiration in salt marsh sediments. Limnology and Oceanography. 65
Preheim S.P., Boucher Y., Woldschutte H., David L.A., Veneziano D., Alm E.J., Polz M.F..  2011.  Metapopulation structure of Vibrionaceae among coastal marine invertebrates. Environmental Microbiology. 13:265-275.
Gardner L.R., Gaines E.F..  2008.  A method for estimating pore water drainage from marsh soils using rainfall and well records. Estuarine, Coastal and Shelf Science. 79:51-58.
Briggs M.A., Gooseff M.N., Arp C.D., Baker M.A..  2009.  A method for estimating surface transient storage parameters for streams with concurrent hyporheic storage. Water Resources Research. 45
Pontius, Jr. R.G., Krithivasan R., Sauls L., Yan Y., Zhang Y..  2017.  Methods to summarize change among land categories across time intervals. Journal of Land Use Science. 12:218-230.
Hobbie J.E., Hobbie E.A..  2013.   Microbes in nature are limited by carbon and energy: the starving-survival lifestyle in soil and consequences for estimating microbial rates. Frontiers in Terrestrial Microbiology.
Moulton O.M., Altabet M.A., Beman J.M., Deegan L.A., Lloret J., Lyons M.K., Nelson J.A., Pfister C.A..  2016.  Microbial associations with macrobiota in coastal ecosystems: patterns and implications for nitrogen cycling. Frontiers in Ecology and the Environment. 14:200-208.
Crump B.C., Hopkinson C.S., Sogin M.L., Hobbie J.H..  2004.  Microbial biogeography along an estuarine salinity gradient: the combined influences of bacterial growth and residence time.. Applied and Environmental Microbiology. 70:1494-1505.
Bowen J.L., Ward B.B., Morrison H.G., Hobbie J.E., Valiela I., Deegan L.A., Sogin M.L..  2011.  Microbial community composition in salt marsh sediments resists perturbation by nutrient enrichment. The ISME Journal. 5:1540-1548.
Liu Z, Fagherazzi S, Li J, Cui B.  2021.  Mismatch between watershed effects and local efforts constrains the success of coastal salt marsh vegetation restoration. Journal of Cleaner Production. 292:126103.
Fennel K., Brady D., DiToro D., Fulweiler R.W., Gardner W.S., Giblin A., McCarthy M.J., Rao A., Seitzinger S., Thouvenot-Korppoo M. et al..  2009.  Modeling denitrification in aquatic sediments. Biogeochemistry. 93:159-178.
Schneider L., Pontius, Jr. R.G..  2001.  Modeling land-use change in the Ipswich watershed, Massachusetts, USA. Agriculture, Ecosystems & Environment. 85:83-94.
Vallino J.J..  2003.  Modeling microbial consortiums as distributed metabolic networks. Biological Bulletin. 204:174-179.
Filoso S., Vallino J.J, Hopkinson C., Rastetter E., Claessens L..  2004.  Modeling Nitrogen Transport in the Ipswich River Basin, Massachusetts, Using HSPF.. Journal of the American Water Resources Association. 40:1365-1384.