PIE LTER Publications

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Vorosmarty C., Peterson B..  2000.  Macro-scale models of water and nutrient flux to the coastal zone. Estuarine Science: A Synthetic Approach to Research and Practice. :43-80.
Aldwaik S., Pontius, Jr. R.G..  2013.  Map errors that could account for deviations from a uniform intensity of land change. International Journal of Geographical Information Science .
Allee R.J., Dethier M., Brown D., Deegan L., Ford R.G., Hourigan T.F., Maragos J., Schoch C., Sealey K., Twilley R. et al..  2000.  Marine and Estuarine Ecosystem and Habitat Classification.
Buchsbaum R., Purinton T., Magnusson B..  2002.  The marine resources of the Parker River-Plum Island Sound estuary: An update after 30 years.
Krest J.M, Moore W.S., Gardner L.R., Morris J.T..  2000.  Marsh nutrient export supplied by ground water discharge: Evidence from radium measurements. Global Biogeochemical Cycles. 14:167-176.
Forbrich I., Giblin A.E..  2015.  Marsh-atmosphere exchange of CO2 in a New England salt marsh. Journal of Geophysical Research- Biogeosciences. 120
Holmes R.M., McClelland J., Sigman D.M., Fry B., Peterson B.J..  1998.  Measuring 15N-NH4 in marine, estuarine, and freshwaters: an adaptation of the ammonium diffusion method for samples with low ammonium concentrations.. Marine Chemistry. 60:235-243.
Runfola D.S.M., Pontius, Jr. R.G..  2013.  Measuring the temporal instability of land change using the Flow matrix. International Journal of Geographical Information Science.
Bulseco A.N., Vineis J.H., Murphy A.E., Spivak A.C., Giblin A.E., Tucker J., Bowen J.L..  In Press.  Metagenomics coupled with biogeochemical rates measurements provide evidence that nitrate addition stimulates respiration in salt marsh sediments.. Limnology and Oceanography.
Preheim S.P., Boucher Y., Woldschutte H., David L.A., Veneziano D., Alm E.J., Polz M.F..  2011.  Metapopulation structure of Vibrionaceae among coastal marine invertebrates. Environmental Microbiology. 13:265-275.
Gardner L.R., Gaines E.F..  2008.  A method for estimating pore water drainage from marsh soils using rainfall and well records. Estuarine, Coastal and Shelf Science. 79:51-58.
Briggs M.A., Gooseff M.N., Arp C.D., Baker M.A..  2009.  A method for estimating surface transient storage parameters for streams with concurrent hyporheic storage. Water Resources Research. 45
Parker D..  2002.  A method to produce hydrologically corrected DEMs. M.S.
Pontius, Jr. R.G., Krithivasan R., Sauls L., Yan Y., Zhang Y..  2017.  Methods to summarize change among land categories across time intervals. Journal of Land Use Science. 12:218-230.
Hobbie J.E., Hobbie E.A..  2013.   Microbes in nature are limited by carbon and energy: the starving-survival lifestyle in soil and consequences for estimating microbial rates. Frontiers in Terrestrial Microbiology.
Moulton O.M., Altabet M.A., Beman J.M., Deegan L.A., Lloret J., Lyons M.K., Nelson J.A., Pfister C.A..  2016.  Microbial associations with macrobiota in coastal ecosystems: patterns and implications for nitrogen cycling. Frontiers in Ecology and the Environment. 14:200-208.
Crump B.C., Hopkinson C.S., Sogin M.L., Hobbie J.H..  2004.  Microbial biogeography along an estuarine salinity gradient: the combined influences of bacterial growth and residence time.. Applied and Environmental Microbiology. 70:1494-1505.
Bowen J.L., Ward B.B., Morrison H.G., Hobbie J.E., Valiela I., Deegan L.A., Sogin M.L..  2011.  Microbial community composition in salt marsh sediments resists perturbation by nutrient enrichment. The ISME Journal. 5:1540-1548.
Fennel K., Brady D., DiToro D., Fulweiler R.W., Gardner W.S., Giblin A., McCarthy M.J., Rao A., Seitzinger S., Thouvenot-Korppoo M. et al..  2009.  Modeling denitrification in aquatic sediments. Biogeochemistry. 93:159-178.
Schneider L., Pontius, Jr. R.G..  2001.  Modeling land-use change in the Ipswich watershed, Massachusetts, USA. Agriculture, Ecosystems & Environment. 85:83-94.
Vallino J.J..  2003.  Modeling microbial consortiums as distributed metabolic networks. Biological Bulletin. 204:174-179.
Filoso S., Vallino J.J, Hopkinson C., Rastetter E., Claessens L..  2004.  Modeling Nitrogen Transport in the Ipswich River Basin, Massachusetts, Using HSPF.. Journal of the American Water Resources Association. 40:1365-1384.
Leonardi N..  2015.  Modeling the effect of Marine Processes on Deltaic Wetland. PhD
Mariotti G., Fagherazzi S..  2012.  Modeling the effect of tides and waves on benthic biofilms.. Journal of Geophysical Research. 117
Kirkby R., Claessens L., , Rastetter E., Vallino J..  2000.  Modeling the effects of land-use change on nitrogen biogeochemistry in the Ipswich watershed, Massachusetts. Biological Bulletin. 199:218-219.

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