PIE LTER Publications

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Conference Proceedings
Holt E., Buchsbaum R..  2000.  Bird use of Phragmites australis in coastal marshes of northern Massachusetts.. Proceedings of the 1st National Conference on Marine Bioinvasions. Jan 24-27, 1999:232-240.
Journal Article
Bouillon S., Boschker H.T.S..  2006.  Bacterial carbon sources in coastal sediments: a cross-system analysis based on stable isotope data of biomarkers. Biogeosciences. 3:175-185.
Raymond P.A., Bauer J.E..  2000.  Bacterial consumption of DOC during transport through a temperate estuary. Aquatic Microbial Ecology. 22:1-12.
Levine U.Y., Crump B.C..  2002.  Bacterioplankton Community Composition in Flowing Waters of the Ipswich River Watershed. Biological Bulletin. 203:251-252.
Smith J.M., Mather M.E..  2013.  Beaver dams maintain native fish biodiversity by increasing habitat heterogeneity throughout a low-gradient stream network.. Freshwater Biology. 58:1523-1538.
Aldwaik S.Z., Onsted J.A., Pontius, Jr. R.G..  2015.  Behavior-based aggregation of land categories for temporal change analysis. International Journal of Applied Earth Observation and Geoinformation. 35:229-238.
Hopkinson C.S, Giblin A.E., Tucker J., Garritt R.H..  1999.  Benthic metabolism and nutrient cycling along an estuarine salinity gradient.. Estuaries. 22:825-843.
Hopkinson C.S, Giblin A.E., Tucker J..  2001.  Benthic metabolism and nutrient regeneration on the continental shelf off eastern Massachusetts, USA. Marine Ecology Progress Series. 224:1-19.
Harris E.M., Martin D.G., Polsky C., Denhardt L., Nehring A..  2012.  Beyond 'Lawn People': The role of emotions in suburban yard management practices. The Professional Geographer.
Mori AS, Dee LE, Gonzalez A, Ohashi H, Cowles J, Wright AJ, Loreau M, Hautier Y, Newbold T, Reich PB et al..  2021.  Biodiversity–productivity relationships are key to nature-based climate solutions. Nature Climate Change. 11:543–550.
Thouin J.A., Wollheim W.M., Vorosmarty C.J., Jacobs J., McDowell W.H..  2009.  The biogeochemical influences of nitrate, dissolved oxygen, and dissolved organic carbon on stream nitrate uptake.. Journal of the North American Benthological Society. 28:894-907.
Gourgue O, van Belzen J, Schwarz C, Vandenbruwaene W, Vanlede J, Belliard J-P, Fagherazzi S, Bouma TJ, van de Koppel J, Temmerman S.  2022.  Biogeomorphic modeling to assess the resilience of tidal-marsh restoration to sea level rise and sediment supply. Earth Surface Dynamics. 10:531–553.
Bogdan P, Caetano-Anollés G, Jolles A, Kim H, Morris J, Murphy CA, Royer C, Snell EH, Steinbrenner A, Strausfeld N.  2022.  Biological Networks across Scales—The Theoretical and Empirical Foundations for Time-Varying Complex Networks that Connect Structure and Function across Levels of Biological Organization. Integrative and Comparative Biology. 61:1991–2010.
Battin T.J., Kaplan L., Findlay S., Hopkinson C., Marti E., Packman A., Newbold J.D., Sabater F..  2008.  Biophysical controls on organic carbon fluxes in fluvial networks. Nature Geoscience. 1:95-100.
Liu Z, Gourgue O, Fagherazzi S.  2022.  Biotic and abiotic factors control the geomorphic characteristics of channel networks in salt marshes. Limnology and Oceanography. 67:89–101.
Wittyngham SS, Pant M, Martínez-Soto K, Johnson DS.  2021.  Biotic Recovery Following Ice-Rafting in a Salt Marsh. Estuaries and Coasts.
Johnson D.S., Heard R..  2017.  Bottom-up control of parasites. Ecosphere. 8
Morris J.T., Shaffer J.A., Nynam J.A..  2013.  Brinson Review: Perspectives on the influence of nutrients on the sustainability of coastal wetlands. Wetlands. 33:975-988.
Holden M, Lippitt C., Pontius, Jr. R.G., Williams C..  2003.  Building a database of historic land cover to detect landscape change.. Biological Bulletin. 205:257-258.
Thesis
Smith J.M..  2011.  Beaver dams maintain native fish biodiversity via altered habitat heterogeneity in a coastal stream network: evaluating gear, quantifying fish assemblages, and testing ecological hypotheses with empirical data.. Ph.D.
Thouin J..  2008.  The biogeochemical influences of nitrate, dissolved oxygen, and dissolved organic carbon on stream nitrate uptake. M.S.