PIE LTER Publications

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2003
S. Fantroussi E, Urakawa H., Bernhard A.E., Kelly J.J., Noble P.A., Stahl D.A..  2003.  Direct profiling of environmental microbial populations by thermal dissociation analysis of native ribosomal RNAs hybridized to oligonucleotide microarrays.. Applied Environmental Microbiology. 69:2377-2382.
Vallino J.J..  2003.  Modeling microbial consortiums as distributed metabolic networks. Biological Bulletin. 204:174-179.
2010
Bernhard A., Landry Z.C., Blevins A., Torre J.R.de al, Giblin A.E., Stahl D.A..  2010.  Abundance of ammonia-oxidizing Archaea and Bacteria along an estuarine salinity gradient in relationship to potential nitrification rates.. Applied and Environmental Microbiology. 76:1285-1289.
2011
Preheim S.P., Boucher Y., Woldschutte H., David L.A., Veneziano D., Alm E.J., Polz M.F..  2011.  Metapopulation structure of Vibrionaceae among coastal marine invertebrates. Environmental Microbiology. 13:265-275.
Bowen J.L., Ward B.B., Morrison H.G., Hobbie J.E., Valiela I., Deegan L.A., Sogin M.L..  2011.  Microbial community composition in salt marsh sediments resists perturbation by nutrient enrichment. The ISME Journal. 5:1540-1548.
2014
Algar C.K., Vallino J.J..  2014.  Predicting microbial nitrate reduction pathways in coastal sediments. Aquatic Microbial Ecology. 71:223-238.
2016
Moulton O.M., Altabet M.A., Beman J.M., Deegan L.A., Lloret J., Lyons M.K., Nelson J.A., Pfister C.A..  2016.  Microbial associations with macrobiota in coastal ecosystems: patterns and implications for nitrogen cycling. Frontiers in Ecology and the Environment. 14:200-208.
2019
Bulseco A.N., Giblin A.E., Tucker J., Murphy A.E., Hiller-Bittrolff K., Bowen J.L..  2019.  Nitrate addition stimulates microbial decomposition of organic matter in salt marsh sediments. Global Change Biology.
2020
Vallino J.J..  2020.  maxEntropyProd/MEP-SidersPond: Release of Fortran code associated with published paper.
2022
Vineis J.H.  2022.  Nutrient influence on microbial structure and function within salt marsh sediments. Ph.D.