PIE LTER Publications

Export 15 results:
Filters: Keyword is bacteria  [Clear All Filters]
Thesis
Kearns P..  2017.  Factors that affect the composition and activity of salt marsh microbial communities: the effect of nutrient loading and diel cycles. PhD
Journal Article
Zwart G., Crump B.C., van Agterveld M.P.Kamst-, Hagen F., Han S.K..  2002.  Typical freshwater bacteria: an analysis of available 16S rRNA gene sequences from plankton of freshwater lakes and rivers.. Aquatic Microbial Ecology. 28:141-155.
Bowen J.L., Crump B.C., Deegan L.A., Hobbie J.E..  2009.  Salt marsh sediment bacteria: their distribution and response to external nutrient inputs. The ISME Journal. 3:924-934.
Pascal P-Y., Fleeger J.W., Boschker H.T.S., Mitwally H.M., Johnson D.S..  2013.  Response of the benthic food web to short- and long-term nutrient enrichment in saltmarsh mudflats.. Marine Ecological Progress Series. 474:27-41.
Zwart G., van Hannen E.J., van Agerveld M.P.Kamst-, van der Gucht K., Lindstrom E.S., Van Wichelen J., Lauridsen T., Crump B.C., Han S.K., Declerck S..  2003.  Rapid screening for freshwater bacterial groups using reverse line blot hybridization. Applied Environmental Microbiology. 69:5875-5883.
Kearns P., Angell J.H., Howard E., Deegan L.A., Stanley R.H., Bowen J.L..  2016.  Nutrient enrichment induces dormancy and decreases diversity of active bacteria. Nature Communications. 7
Bahr M., Crump B.C., Klepac-Ceraj V., Teske A.P., Sogin M.L., Hobbie J.E..  2005.  Molecular characterization of sulfate-reducing bacteria in a New England salt marsh.. Environmental Microbiology. 7:1175-1185.
Crump B.C., Hopkinson C.S., Sogin M.L., Hobbie J.H..  2004.  Microbial biogeography along an estuarine salinity gradient: the combined influences of bacterial growth and residence time.. Applied and Environmental Microbiology. 70:1494-1505.
Bernhard A., Donn T.M., Giblin A.E., Stahl D.A..  2005.  Loss of Diversity of Ammonia-Oxidizing Bacteria Correlates with Increasing Salinity in an Estuary System.. Environmental Microbiology. 7:1289-1297.
Hopkinson C.S, Giblin A.E., Garritt R.H., Tucker J., Hullar M.A.J..  1998.  Influence of the benthos on growth of planktonic estuarine bacteria . Aquatic Microbial Ecology. 16:109-118.
Klepac-Ceraj V., Bahr M., Crump B.C., Teske A.P., Hobbie J.E., Poltz M.F..  2004.  High overall diversity and dominance of microdiverse relationships in salt marsh sulfate-reducing bacteria.. Environmental Microbiology. 6:686-698.
Bernhard A.E., Tucker J., Giblin A.E., Stahl D.A..  2007.  Functionally distinct communities of ammonia-oxidizing bacteria along an estuarine salinity gradient. Environmental Microbiology. 9:1439-1447.
Nielsen J.L., Schramm A., Bernhard A.E., EnghG.J. vanden, Stahl D.A..  2004.  Flow Cytometry-Assisted Cloning of Specific Sequence Motifs from Complex 16S rRNA Gene Libraries. Applied and Environmental Microbiology. 70:7550-7554.
Acinas S.G., Klepac-Ceraj K., Hunt D.E., Pharino C., Ceraj C., Distel D.L., Polz M.F..  2004.  Fine-scale phylogenetic architecture of a complex bacterial community.. Nature. 430:551-554.
Bouillon S., Boschker H.T.S..  2006.  Bacterial carbon sources in coastal sediments: a cross-system analysis based on stable isotope data of biomarkers. Biogeosciences. 3:175-185.