%0 Journal Article %J Applied and Environmental Microbiology %D 2010 %T Abundance of ammonia-oxidizing Archaea and Bacteria along an estuarine salinity gradient in relationship to potential nitrification rates. %A Bernhard, A. %A Landry, Z.C. %A Blevins, A. %A de al Torre, J.R. %A Giblin, A.E. %A Stahl, D.A. %K disturbance %K estuaries %K LTER-PIE %K microbes %K nitrification %K population dynamics %B Applied and Environmental Microbiology %V 76 %P 1285-1289 %G eng %M PIE170 %] NSF-LTER-PIE %R 10.1128/AEM.02018-09 %F Journal Article %0 Journal Article %J Environmental Microbiology %D 2007 %T Functionally distinct communities of ammonia-oxidizing bacteria along an estuarine salinity gradient %A Bernhard, A.E. %A Tucker, J. %A Giblin, A.E. %A Stahl, D.A. %K ammonia %K bacteria %K disturbance %K LTER-PIE %K population dynamics %K salinity gradient %B Environmental Microbiology %V 9 %P 1439-1447 %G eng %M PIE166 %] NSF-LTER-PIE %R 10.1111/j.1462-2920.2007.01260.x %F Journal Article %0 Journal Article %J Environmental Microbiology %D 2005 %T Loss of Diversity of Ammonia-Oxidizing Bacteria Correlates with Increasing Salinity in an Estuary System. %A Bernhard, A. %A Donn, T.M. %A Giblin, A.E. %A Stahl, D.A. %K ammonia %K bacteria %K diversity %K estuary %K LTER-PIE %B Environmental Microbiology %V 7 %P 1289-1297 %G eng %M PIE148 %] NSF-LTER-PIE %R 10.1111/j.1462-2920.2005.00808.x %F Journal Article %0 Journal Article %J Applied and Environmental Microbiology %D 2004 %T Flow Cytometry-Assisted Cloning of Specific Sequence Motifs from Complex 16S rRNA Gene Libraries %A Nielsen, J.L. %A Schramm, A. %A Bernhard, A.E. %A van den EnghG.J. %A Stahl, D.A. %K bacteria %K flow cytometry %K LTER-PIE %B Applied and Environmental Microbiology %V 70 %P 7550-7554 %G eng %M PIE129 %] NSF-LTER-PIE %R 10.1128/AEM.70.12.7550-7554.2004 %F Journal Article %0 Journal Article %J Applied Environmental Microbiology %D 2003 %T Direct profiling of environmental microbial populations by thermal dissociation analysis of native ribosomal RNAs hybridized to oligonucleotide microarrays. %A El Fantroussi, S. %A Urakawa, H. %A Bernhard, A.E. %A Kelly, J.J. %A Noble, P.A. %A Stahl, D.A. %K LTER-PIE %K microbes %K population %K RNA %B Applied Environmental Microbiology %V 69 %P 2377-2382 %G eng %M PIE96 %] NSF-LTER-PIE %R 10.1128/AEM.69.4.2377-2382.2003 %F Journal Article