Vineis J.H.  2022.  Nutrient influence on microbial structure and function within salt marsh sediments. Ph.D.

Tsakalakis I., Follows J., Dutkiewicz S., Follett C.L, Vallino J.J..  2021.  Diel light cycles affect phytoplankton competition in the global ocean. BioRxiv. 2021.05.19.444874

Ganju N.K., Defne Z., Fagherazzi S..  2020.  Are elevation and open?water conversion of salt marshes connected? Geophysical Research Letters. 47

Johnson D.S., Shields J.D., Doucette D., Heard R..  2020.  A climate migrant escapes its parasites. Marine Ecological Progress Series. 641:111-121.

Martinez-Soto K.S., Johnson D.S..  2020.  The density of the Atlantic marsh fiddler crab (Minuca pugnax, Smith, 1870) (Decapoda: Brachyura: Ocypodidae) in its expanded range in the Gulf of Maine, USA . Journal of Crustacean Biology. 40:544-548.

Zhang X., Fichot C.G., Baracco C., Guo R., Neugebauer S., Bengtsson Z., Ganju N.K., Fagherazzi S..  2020.  Determining the drivers of suspended sediment dynamics in tidal marsh-influenced estuaries using high-resolution ocean color remote sensing. Remote Sensing of Environment. 240

Johnson D.S., Martinez-Soto K.S., Pant M., Wittyngham S.S, Goetz E.M..  2020.  The fiddler crab Minuca pugnax () (Decapoda: Brachyura: Ocypodidae) reduces saltmarsh algae in its expanded range . Journal of Crustacean Biology. 

Wiberg P.L., Fagherazzi S., Kirwan M.L..  2020.  Improving predictions of salt marsh evolution through better integration of data and models.. Annual Review of Marine Science. 12:389-413.

Donatelli C., Zhang X., Ganju N.K., Aretxabaleta A.L., Fagherazzi S., Leonardi N..  2020.  A nonlinear relationship between marsh size and sediment trapping capacity compromises salt marshes? stability.. Geology. 

Howard E.M., Spivak A.C., Karolewski J.S., Gosslein K.M., Sandwidth Z.O., Manning C.C., Stanley R.H.R.  2020.  Oxygen and Triple Oxygen Isotope Measurements Provide Different Insights into Gross Oxygen Production in a Shallow Salt Marsh Pond.. Estuaries and Coasts. 

Demberger S..  2020.  Quantifying and Valuing Carbon and Nitrogen Sequestration as Ecosystem Services in Salt Marshes.. MS

Spivak A.C., Denmark A., Gosselin K., Sylva S.P..  2020.  Salt Marsh Pond Biogeochemistry Changes Hourly to Yearly but Does Not Scale With Dimensions or Geospatial Position. Journal of Geophysical Research: Biogeosciences. 125

Stumpf A.  2020.  Tidal marsh response to sediment deposition from tropical and extratropical storms. MS thesis. M.S.

Feagin A., Forbrich I., Huff T.P., Barr J.G, Ruiz-Plancarte J., Fuentes J.D, NaJJar R.G, Vargas R., Vázquez?Lule A., L. W?M. et al..  2020.  Tidal Wetland Gross Primary Production Across the Continental United States, 2000?2019.. Global Biogeochemical Cycles. 34

Palazzoli I, Leonardi N., Jimenez-Robles A.M., Fagherazzi S..  2020.  Velocity skew controls the flushing of a tracer in a system of shallow bays with multiple inlets.. Continental Shelf Research. 192

Jezycki K..  2019.  Assessing heavy metal pollution in estuarine systems along the eastern United States in relation to land use land cover changes.. MS

Donatelli C., Ganju N.K., Kalra T.S., Fagherazzi S., Leonardi N..  2019.  Changes in hydrodynamics and wave energy as a result of seagrass decline along the shoreline of a microtidal back-barrier estuary.. Advances in Water Resources. 128:183-192.

Paynter I., Schaaf C., Bowen J.L., Deegan L., Peri F., Cook B..  2019.  Characterizing a New England Saltmarsh with NASA G-LiHT Airborne Lidar. Remote Sensing. 11:509-539.

Pontius, Jr. R.G..  2019.  Component intensities to relate difference by category with difference overall. International Journal of Applied Earth Observation and Geoinformation. 

Miller G.J., Morris J.T., Wang C..  2019.  Estimating Aboveground Biomass and Its Spatial Distribution in Coastal Wetlands Utilizing Planet Multispectral Imagery. Remote Sensing. 11

Zhang X., Leonardi N., Donatelli C., Fagherazzi S..  2019.  Fate of cohesive sediments in a marsh-dominated estuary. Advances in Water Resources. 125:32-40.

Johnson D.S., Crowley C., Longmire K., Nelson J.A., Williams B., Wittyngham S..  2019.  The fiddler crab, Minuca pugnax, follows Bergmann?s rule.. Ecology and Evolution. 9:14489-14497.

Stewart L.C., Algar C.K., Fortunato C.S., Larson B.I., Vallino J.J., Huber J.A., Butterfield D.A., Holden J.F..  2019.  Fluid geochemistry, local hydrology, and metabolic activity define methanogen community size and composition in deep-sea hydrothermal vents. ISME. 

Spivak A.C., Sanderman J., Bowen J.L., Canuel E.A., Hopkinson C.S..  2019.  Global-change controls on soil-carbon accumulation and loss in coastal vegetated ecosystems. Nature Geoscience. 12:685-692.

Komatsu K.J., Avolio M.L, Lemoine N.P., Isbell F., Grman E., Houseman G.R., Koerner S.E., Johnson D.S., Wilcox K.R., Alatalo J.M. et al..  2019.  Global-change effects on plant communities are magnified by time and the number of global-change factors imposed.. Proceedings of the National Academy of Sciences of the United States of America. 116:17867-17873.

Shafizadeh-Moghadam H., Minaei M., Feng Y., Pontius, Jr. R.G..  2019.  GlobeLand30 maps show four times larger gross than net land change from 2000 to 2010 in Asia. International Journal of Applied Earth Observation and Geoinformation. 

Varga O.G., Pontius, Jr. R.G., Singh S.K., Szabo S..  2019.  Intensity Analysis and the Figure of Merit?s components for assessment of a Cellular Automata ? Markov simulation model. Ecological Indicators. 

Quan B., Jr R.G.Pontius, H. S.  2019.  Intensity Analysis to communicate land change during three time intervals in two regions of Quanzhou City, China.. GIScience & Remote Sensing. 

Bulseco A.N., Vineis J.H., Murphy A.E., Spivak A.C., Giblin A.E., Tucker J., Bowen J.L..  2019.  Metagenomics coupled with biogeochemical rates measurements provide evidence that nitrate addition stimulates respiration in salt marsh sediments.. Limnology and Oceanography. 65

Bulseco A.N., Giblin A.E., Tucker J., Murphy A.E., Hiller-Bittrolff K., Bowen J.L..  2019.  Nitrate addition stimulates microbial decomposition of organic matter in salt marsh sediments. Global Change Biology. 

Miller G.J.  2019.  Salt marsh health and biomass responses to a changing environment. :140.

Fagherazzi S., Anisfeld S.C., Blum L.K., Long E.V., Feagin R.A., Fernandes A., Kearney W.S., Williams K..  2019.  Sea Level Rise and the Dynamics of the Marsh-Upland Boundary. Frontiers in Environmental Science. 

Wong R..  2019.  The Sediment Sonata: The Relationship Between Marsh Sediment Compaction and the Burrowing Behavior of the Atlantic Sand Fiddler Crab Leptuca (Uca) pugilator. . BS

Thomas F, Morris J.T., Wigand C., Sievert S.M..  2019.  Short-term effect of simulated salt marsh restoration by sand-amendment on sediment bacterial communities. PLoS ONE. 14

Mariotti G., Kearney W.S., Fagherazzi S..  2019.  Soil creep in a mesotidal salt marsh channel bank: Fast, seasonal,and water table mediated. Geomorphology. 334:126-137.

Fagherazzi S., Nordio G., Munz K., Catucci D., Kearney W.S..  2019.  Variations in persistence and regenerative zones in coastal forests triggered by sea level rise and storms.. Remote Sensing. 11

Zawatski M..  2018.  Carbon exchange and sediment deposition in a heterogeneous New England salt marsh. MS

Sun S., Fagherazzi S., Liu Y..  2018.  Classification mapping of salt marsh vegetation byflexible monthly NDVItime-series using Landsat imagery. Estuarine and Coastal Shelf Science. 213:61-80.

Huang B., Huang J., Pontius, Jr. R.G., Tu Z..  2018.  Comparison of Intensity Analysis and the land use dynamic degrees to measure land changes outside versus inside the coastal zone of Longhai, China. Ecological Indicators. 89:336-347.

Forbrich I., Giblin A.E., Hopkinson C.S..  2018.  Constraining Marsh Carbon Budgets Using Long-Term C Burial and Contemporary Atmospheric CO2 Fluxes. Journal of Geophysical Research: Biogeosciences. 123:867-878.

Pontius, Jr. R.G..  2018.  Criteria to Confirm Models that Simulate Deforestation and Carbon Disturbance. Landscape and Ecological Engineering. 

Fernandes A., Rollinson C.R., Kearney W.S., Dietze M.C., Fagherazzi S..  2018.  Declining radial growth response of coastal forests to hurricanes and nor?easters. Journal of Geophysical Research. 123:832-849.

Wigand C., Watson E.B., Martin R., Johnson D.S., Warren R.S., Hansen A., Davey E., Johnson R., Deegan L..  2018.  Discontinuities in soil strength contribute to destabilization of nutrient?enriched creeks. Ecosphere. 

Nelson J.A., Johnson D.S., Deegan L.A., Spivak A.C., Sommer N.R..  2018.  Feedbacks Between Nutrient Enrichment and Geomorphology Alter Bottom-Up Control on Food Webs. Ecosystems. 

Sturdy L.  2018.  Herbivory and Predation Patterns in Salt Marsh Habitats of Varying Size and Varying Distribution of Spartina alterniflora and S. patens . BS

Bauer C..  2018.  Interacting effects of genotype and the environment on tallform Spartina alterniflora. MS

Yoo G..  2018.  Investigations of pond metabolism in temperate salt marshes of Massachusetts. BS

Rodriguez E.  2018.  Land cover impacts on mineral sediment delivery and accretion rates in tidal wetlands. M.S.

Rodriguez E..  2018.  Land cover impacts on mineral sediment delivery and accretion rates in tidal wetlands. MS

Hopkinson C.S., Morris J.T., Fagherazzi S., Wollheim W.M., Raymond P.A.  2018.  Lateral Marsh Edge Erosion as a Source of Sediments for Vertical Marsh Accretion. Journal of Geophysical Research. 

Kearns P.J., Bulseco-McKim A.N., Hoyt H., Angell J.H., Bowen J.L..  2018.  Nutrient Enrichment Alters Salt Marsh Fungal Communities and Promotes Putative Fungal Denitrifiers. Microbial Ecology. 

Quan B., Ren H., Pontius, Jr. R.G., Liu P..  2018.  Quantifying spatiotemporal patterns concerning land change in Changsha, China. Landscape and Ecological Engineering. 

Ye S., Pontius, Jr. R.G., Rakshit R..  2018.  A review of accuracy assessment for object-based image analysis: from per-pixel to per-polygon approaches. Journal of Photogrammetry and Remote Sensing. 141:137-147.

Wollheim W.M., Bernal S., Burns D.A., Czuba J.A., Driscoll C.T., Hansen A.T., Hensley R.T., Hosen J.D., Inamdar S., Kaushal S.S. et al..  2018.  River network saturation concept: factors influencing the balance of biogeochemical supply and demand of river networks. Biogeochemistry. 

Bulseco-McKim A..  2018.  The role of nitrate as an electron acceptor in microbial decomposition of salt marsh sediment organic matter and implications for carbon storage. PhD

Nardin W., Fagherazzi S..  2018.  The Role of Waves, Shelf Slope, and Sediment Characteristics on the Development of Erosional Chenier Plains. Geophysical Research Letters. 45:8435-8444.

Spivak A.C., Gosselin K.M, Sylva S.P..  2018.  Shallow ponds are biogeochemically distinct habitats in salt marsh ecosystems. Limnology and Oceanography. 

Kearney W.S..  2018.  Signals of Nonlinear, Multiscale and Stochastic Processes in Coastal Landscapes. PhD

Nardin W., Larsen L., Fagherazzi S., Wiberg P..  2018.  Tradeoffs among hydrodynamics, sedimentfluxes and vegetationcommunity in the Virginia Coast Reserve, USA. Estuarine and Coastal Shelf Science. 210:98-108.

Vallino J.J., Huber J.A..  2018.  Using Maximum Entropy Production to Describe Microbial Biogeochemistry Over Time and Space in a Meromictic Pond. Frontiers in Environmental Science. 

Johnson D.S., Heard R..  2017.  Bottom-up control of parasites. Ecosphere. 8

Howard E..  2017.  Ecosystem metabolism in salt marsh tidal creeks and ponds: Applying triple oxygen isotopes and other gas tracers to novel environments. PhD

Fagherazzi S., Viggato T., Vieillard A.M., Mariotti G., Fulweiler R.W..  2017.  The effect of evaporation on the erodibility of mudflats in a mesotidal estuary. Estuarine, Coastal and Shelf Science. 194:118-127.

Kearns P.J., Holloway D., Angell J.H., Feinman S.G., Bowen J.L..  2017.  Effect of short-term, diel changes in environmental conditions on active microbial communities in a salt marsh pond. Aquatc Microbial Ecology. 80:29-41.

Kearns P..  2017.  Factors that affect the composition and activity of salt marsh microbial communities: the effect of nutrient loading and diel cycles. PhD

Fernandes A..  2017.  The impact of extreme storm surges on Mid Atlantic coastal forests. MS

Pontius, Jr. R.G., Krithivasan R., Sauls L., Yan Y., Zhang Y..  2017.  Methods to summarize change among land categories across time intervals. Journal of Land Use Science. 12:218-230.

Kennedy C.G., Mather M.E., Smith J.M..  2017.  Quantifying Site-Specific Physical Heterogeneity Within an Estuarine Seascape. Estuaries and Coasts. 40:1385-1397.

Whitney C..  2017.  Rates and drivers of nitrogen removal by fluvial wetlands in urbanizing coastal wetlands. M.S.:80.

Rochlin I., Morris J.T..  2017.  Regulation of salt marsh mosquito populations by the 18.6-year lunar-nodal cycle. Ecology. 

Pontius, Jr. R.G., Huang J., Jiang W., Khallaghi S., Lin Y., Liu J., Quan B., Ye S..  2017.  Rules to write mathematics to clarify metrics such as the land use dynamic degrees. Landscape Ecology. 32:2249-2260.

Johnson D.S., Williams B.L..  2017.  Sea level rise may increase extinction risk of a saltmarsh ontogenetic habitat specialist. Ecology and Evolution. 

Spivak A.C., Gosselin K., Howard E., Mariotti G., Forbrich I., Stanley R., Sylva S.P..  2017.  Shallow ponds are heterogeneous habitats within a temperate salt marsh ecosystem. Journal of Geophysical Research: Biogeosciences. 122

Ganju N.K., Defne Z., Kirwan M.L., Fagherazzi S., D'Alpaos A., Carniello L..  2017.  Spatially integrative metrics reveal hidden vulnerability of microtidal salt marshes. Nature Communications. 8

Kearney W.S., Mariotti G., Deegan L.A, Fagherazzi S..  2017.  Stage-discharge relationship in tidal channels. Limnology and Oceanography. 15:394-407.

McDermott J..  2017.  Use of one versus two time points for calibration of land change models. M.S.

Taylor R..  2017.  Using geomorphology and animal ?individuality? to understand ?scape-scale predator distributions. M.S.

Koo K.A., Walker R.L., Davenport E.S., Hopkinson C.S..  2017.  Variability of Mya arenaria growth along an environmental gradient in the Plum Island Sound estuary, Massachusetts, USA. Wetlands Ecology and Management. 25:235-256.

Philbrick S..  2016.  Analyzing the response of land change models to intractable problems. M.S.

Jr. J.D.Edwards.  2016.  Applicability of LiDAR Technology in Saltmarshes:  Landscape-Scale Predictive Models to Local-Scale Biomass Estimation. M.S.:134.

Morris J.T., Barber D.C., Callaway J.C., Chambers R., Hagen S.C., Hopkinson C.S., Johnson B.J., Megonigal P., Neubauer S.C., Troxler T. et al..  2016.  Contributions of organic and inorganic matter to sediment volume and accretion in tidal wetlands at steady state. Earth's Future. 4:110-121.

Kennedy C.G., Mather M.E., Smith J.M., Finn J.T., Deegan L.A..  2016.  Discontinuities concentrate mobile predators: Quantifying organism-environment interactions at a seascape scale. Ecosphere. 7

Wollheim W.M..  2016.  From Headwaters to rivers to river networks: scaling in stream ecology. Streams In a Changing Environment. :349-388.

Graves C.J., Makrides E., Schmidt V., Giblin A.E., Cardon Z.G., Rand D.M..  2016.  Functional responses of salt marsh microbial communities to long-term nutrient enrichment. Applied and Environmental Microbiology. 82:2862-2871.

Spivak A.C., Ossolinski J..  2016.  Limited effects of nutrient enrichment on bacterial carbon sources in salt marsh tidal creek sediments. Marine Ecological Progress Series. 544:107-130.

Leonardi N., Ganju N.K., Fagherazzi S..  2016.  A linear relationship between wave power and erosion determines salt-marsh resilience to violent storms and hurricanes. PNAS. 113:64-68.

Moulton O.M., Altabet M.A., Beman J.M., Deegan L.A., Lloret J., Lyons M.K., Nelson J.A., Pfister C.A..  2016.  Microbial associations with macrobiota in coastal ecosystems: patterns and implications for nitrogen cycling. Frontiers in Ecology and the Environment. 14:200-208.

Kearns P., Angell J.H., Howard E., Deegan L.A., Stanley R.H., Bowen J.L..  2016.  Nutrient enrichment induces dormancy and decreases diversity of active bacteria. Nature Communications. 7

Kirwan M.L., Temmerman S., Skeehan E.E., Guntenspergen G.R., Fagherazzi S..  2016.  Overestimation of marsh vulnerability to sea level rise. Nature Climate Change. 

Baker H.K., Nelson J, Leslie H.M..  2016.  Quantifying striped bass (Morone saxatilis) dependence on saltmarsh-derived productivity using stable isotope analysis. Estuaries and Coasts. 

Leonardi N., Defne Z., Ganju N.K., Fagherazzi S..  2016.  Salt marsh erosion rates and boundary features in a shallow Bay. Journal of Geophysical Research: Earth Surface. 121:1861-1875.

Crosby S.C., Sax D., Palmer M.E., Booth H.S., Deegan L.A., Bertness M.D., Leslie H.M..  2016.  Salt marsh persistence is threatened by predicted sea-level rise. Estuarine and Coastal Shelf Science. 181:93-99.

Kearney W.S., Fagherazzi S..  2016.  Salt marsh vegetation promotes efficient tidal channel networks. Nature Communications. 7

Johnson D.S., Warren R.S., Deegan L.A., Mozdzer T.J..  2016.  Saltmarsh plant responses to eutrophication. Ecological Applications. 

Groffman P.M., Grove J.M., Polsky C., Bettez N.D., Morse J.L., Cavender-Bares J., Hall S.J., Heffernan J.B., Hobbie S.E., Larson K.L. et al..  2016.  Satisfaction, water and fertilizer use in the American residential macrosystem. Environmental Research Letters. 

Bradley A.V., Rosa I.M.D., Pontius, Jr. R.G., Ahmed S.E., Araujo M.B., Brown D.G., A. Jr B, Carnerio T.G.S., Hartley A.J., Smith M.J. et al..  2016.  SimiVal, a multi-criteria map comparison tool for land-change model projections. Environmental Modelling & Software. 

Mariotti G., Kearney W.S., Fagherazzi S..  2016.  Soil creep in salt marshes. Geology. 

Crosby S.C., Angermeyer A., Adler J.M., Bertness M.D., Deegan L.A., Sibinga N., Leslie H.M..  2016.  Spartina alterniflora biomass allocation and temperature: implications for salt marsh persistence with sea-level rise. Estuaries and Coasts. 

Mitwally H.M., Fleeger J.W..  2016.  A test of biological trait analysis with nematodes and an anthropogenic stressor. Environmental Monitoring and Assessment. 188

Vallino J.J., Algar C.K..  2016.  Thermodynamics of Marine Biogeochemical Cycles: Lotka Revisited. Annual Review of Marine Science. 8:333-356.

Aldwaik S.Z., Onsted J.A., Pontius, Jr. R.G..  2015.  Behavior-based aggregation of land categories for temporal change analysis. International Journal of Applied Earth Observation and Geoinformation. 35:229-238.

Williams B..  2015.  Distribution patterns of Melampus bidentatus and their implications on the effects of climate change on salt marsh animal populations. BS

Nelson J.A., Deegan L., Garritt R.H..  2015.  Drivers of spatial and temporal variability in estuarine food webs. Marine Ecological Progress Series. 533:67-77.

Larson K.L., Nelson K.C., Samples S.R., Hall S.J., Bettez N.D., Cavender-Bares J., Groffman P.M., Grove M., Heffernan J.B., Hobbie S. et al..  2015.  Ecosystem service preferences and priorities for residential landscapes: Homogeneity and heterogeneity across diverse cities. . Urban Ecosystems. 

Rastetter E., Vallino J..  2015.  Ecosystem's 80th and the Reemergence of Emergence. Ecosystems. 18:735-739.

Crosby S.C., Ivens-Duran M., Bertness M.D., Davey E., Deegan L.A., Leslie H.M..  2015.  Flowering and biomass allocation in U.S. Atlantic coast Spartina alterniflora. American Journal of Botany. 102

Avolio M.L, La Pierre K.J., Houseman G.R., Koerner S.E., Grman E., Isbell F., Johnson D.S., Wilcox K.R..  2015.  A framework for quantifying the magnitude and variability of community responses to global change drivers. Ecosphere. 6

Smith M.D., La Pierre K.J., Collins S.L., Knapp A.K., Gross K.L., Barrett J.E., Frey S.D., Gough L., Miller R.J., Morris J.T. et al..  2015.  Global environmental change and the nature of aboveground net primary productivity responses: insights from long?term experiments. Oecologia. 

Blanchard S., Pontius, Jr. R.G., Urban K.M..  2015.  Implications of using 2m versus 30 m spatial resolution data for suburban residential land change modeling. Journal of Environmental Informatics. 25:1-13.

Yang Q., Tian H., Friedrichs M.A.M., Hopkinson C.S., Lu C., Najjar R.G..  2015.  Increased nitrogen export from eastern North America to the Atlantic Ocean due to climatic and anthropogenic changes during 1901?2008. Journal of Geophysical Research: Biogeosciences. 120:1046-1068.

Mineau M.M., Wollheim W.M., Stewart R.J..  2015.  An index to characterize the spatial distribution of land use within watersheds and implications for river network nutrient removal and export. Geophysical Research Letters. 42

Watson E.B., Wigand C., Oczkowski A.J., Sundberg K., Vendettuoli D., Jayaraman S., Saliba K., Morris J.T..  2015.  Ulva additions alter soil biogeochemistry and negatively impact Spartina alterniflora growth. Marine Ecological Progress Series. 532:59-72.

Leonardi N., Fagherazzi S..  2015.  Local variability in erosional resistance affects large scale morphodynamic response of salt marshes to wind waves. Geophysical Research Letters. 42

Forbrich I., Giblin A.E..  2015.  Marsh-atmosphere exchange of CO2 in a New England salt marsh. Journal of Geophysical Research- Biogeosciences. 120

Leonardi N..  2015.  Modeling the effect of Marine Processes on Deltaic Wetland. PhD

Giblin A.E..  2015.  Mysteries in the marsh. Long-Term Ecological Research: Changing the Nature of Scientists. 

Morris J.T..  2015.  Perspectives on a 30-Year Career of Salt Marsh Research. Long-Term Environmental Research: Changing the Nature of Scientists. 

Wollheim W.M., Stewart R.J., Aiken G.R., Butler K.D., Morse N.B., Salisbury J..  2015.  Removal of terrestrial dissolved organic carbon in aquatic ecosystems of a temperate river network. Geophysical Research Letters. 42

Johnson D.S..  2015.  The savory swimmer swims North: A northern range extension of the blue crab Callinectes sapidus? Journal of Crustacean Biology. 35:105-110.

Mariotti G., Valentine K., Fagherazzi S..  2015.  Time-dependent behavior of a placed bed of cohesive sediment subjected to erosion and deposition cycles. Ocean Dynamics. 65:287-294.

Kaushal S.S., McDowell W.H., Wollheim W.M., Johnson T.A.Newcomer, Mayer P.M., Belt K.T., Pennino M.J..  2015.  Urban evolution: the role of water. Water Resources Research. 7:4063-4087.

Schmitz O.J., Raymond P.A, Estes J.A., Kurz W.A., Holtgrieve G.W., Ritchie M.E., Schindler D.E., Spivak A.C., Wilson R.W., Bradford M.A. et al..  2014.  Animating the Carbon Cycle. Ecosystems. 17:344-359.

Polsky C., Grove J.M., Knudson C., Groffman P.M., Bettez N.D., Canvender-Bares J., Hall S.J., Heffernan J.B., Hobbie S.E., Larson K.L. et al..  2014.  Assessing the homogenization of urban land management with an application to US residential lawn care.. Proceedings of the National Academy of Sciences. 111:4432-4437.

Morse N.B., Wollheim W.M..  2014.  Climate variability masks the impacts of land use change on nutrient export in a suburbanizing watershed. Biogeochemistry. 

Steele M.K., Heffernan J.B., Bettez N.D., Cavender-Bares J., Groffman P.M., Grove J.M., Hall S., Hobbie S.E., Larson K., Morse J.L. et al..  2014.  Convergent Surface Water Distributions in U.S. Cities. Ecosystems. 

Giner N.M., Polsky C., Pontius, Jr. R.G., Runfola D.M., S.J. R.  2014.  Creating spatially-explicit lawn maps without classifying remotely sensed imagery: The case of suburban Boston, Massachusetts, USA. Cities and the Environment. 7

Groffman P.M., Cavender-Bares J., Bettez N.D., Grove J.M., Hall S.J., Heffernan J.B., S.E. H., Larson K.L., Morse J.L., Neill C. et al..  2014.  Ecological Homogenization of Urban America. Frontiers in Ecology and Environment. :74-81.

Sullivan H.L..  2014.  The effects of nitrate fertilization on the photosynthetic performance of the salt marsh cordgrass, Spartina alterniflora. M.S.

Johnson D.S..  2014.  Fiddler on the roof: a northern range extension for the marsh fiddler crab Uca pugnax. Journal of Crustacean Biology. 34:671-673.

Leonardi N., Fagherazzi S..  2014.  How waves shape salt marshes. Geology. 

Mozdzer T.J., McGlathery K.J., Mills A.L., Zieman J.C..  2014.  Latitudinal variation in the availability and use of dissolved organic nitrogen in Atlantic coast salt marshes. Ecology. 

Mitwally H.M., Fleeger J.W..  2014.  Long-term nutrient enrichment alters nematode trophic structure and body size in a Spartina alterniflora salt marsh. Marine Ecology. :1-16.

Dodds W.K., Webster J.R, Crenshaw C., Helton A.M., O'Brien J.M., Marti E., Hershey A.E., Tank J.L., Burgin A.J., Grimm N.B. et al..  2014.  The Lotic Intersite Nitrogen Experiments: an example of successful ecological research collaboration.. Freshwater Science. 33:700-710.

Wollheim W.M., Harms T.K., Peterson B.J., Morkeski K., Hopkinson C.S., Stewart R.J., Gooseff M.N., Briggs M.A..  2014.  Nitrate uptake dynamics of surface transient storage in channels and fluvial wetlands.. Biogeochemistry. 120:239-257.

Algar C.K., Vallino J.J..  2014.  Predicting microbial nitrate reduction pathways in coastal sediments. Aquatic Microbial Ecology. 71:223-238.

Morse N.B..  2014.  Quantifying the Impact of Urbanization on N and P Inputs, Transformations, Removal and Fluxes in Watersheds Draining to the Plum Island Estuary. PhD

Pontius, Jr. R.G., Santacruz A..  2014.  Quantity, Exchange and Shift Components of Differences in a Square Contingency Table. International Journal of Remote Sensing. 35:7543-7554.

Pontius, Jr. R.G., Parmentier B..  2014.  Recommendations for using the Relative Operating Characteristic (ROC). Landscape Ecology. 29:367-382.

Fagherazzi S., Mariotti G., Banks A.T., Morgan E.J., Fulweiler R.W..  2014.  The relationships among hydrodynamics, sediment distribution, and chlorophyll in a mesotidal estuary.. Estuarine and Coastal Shelf Science. 144:54-64.

Valentine K., Mariotti G., Fagherazzi S..  2014.  Repeated erosion of cohesive sediments with biofilms. Advances in Geosciences. 39:9-14.

Wilson C.A., Hughes Z.J., FitzGerald D.M., Hopkinson C.S., Valentine V., Kolker A.S..  2014.  Saltmarsh pool and tidal creek morphodynamics: Dynamic equilibrium of northern latitude saltmarshes? Geomorphology. :99-115.

Pontius, Jr. R.G., Si K.  2014.  The Total Operating Characteristic to measure diagnostic ability for multiple thresholds. International Journal of Geographical Information Science. 28:570-583.

Kaushal S.S., McDowell W.H., Wollheim W.M..  2014.  Tracking evolution of urban biogeochemical cycles: past, present, and future. Biogeochemistry. 121:1-21.

Vallino J.J., Algar C.K., N. Gonzales F, Huber J.A..  2014.  Use of receding horizon optimal control to solve MaxEP-based biogeochemistry problems. Beyond the Second Law: Entropy Production and Non-Equilibrium Systems. :337-359.

Runfola D.M., Hamill T.A., Pontius, Jr. R.G., Rogan J., Giner N., Decatur A., Ratick S..  2014.  Using Fine Resolution Orthoimagery and Spatial Interpolation to Rapidly Map Turf Grass in Suburban Massachusetts. International Journal of Geospatial and Environmental Research . 1

Smith J.M., Mather M.E..  2013.  Beaver dams maintain native fish biodiversity by increasing habitat heterogeneity throughout a low-gradient stream network.. Freshwater Biology. 58:1523-1538.

Morris J.T., Shaffer J.A., Nynam J.A..  2013.  Brinson Review: Perspectives on the influence of nutrients on the sustainability of coastal wetlands. Wetlands. 33:975-988.

Wollheim W.M., Green M.B., Pellerin B.A., Morse N.B., Hopkinson C.S..  2013.  Causes and Consequences of Ecosystem Service Regionalization in a Coastal Suburban Watershed. Estuaries and Coasts. 

Bauer J.E., Cai W-J., Raymond P.A, Bianchi T.S., Hopkinson C.S., Regnier P.A.G..  2013.  The changing carbon cycle of the coastal ocean.. Nature. 504:61-70.

Johnson D.S., Short M.I..  2013.  Chronic nutrient enrichment increases the density and biomass of the mudsnail, Nassarius obsoletus.. Estuaries and Coasts. 36:28-35.

Weston N.B..  2013.  Declining Sediments and Rising Seas: an Unfortunate Convergence for Tidal Wetlands. Estuaries and Coasts. 

Pascal P-Y., Fleeger J.W..  2013.  Diverse dietary responses by saltmarsh consumers to chronic nutrient enrichment.. Estuaries and Coasts. 36:1115-1124.

Dixon E..  2013.  Diversity of residential plant communities along an urbanization gradient. BS:36.

Booth H.S..  2013.  Does Chronic Nutrient Enrichment Result in a Trophic Bottleneck in a Salt Marsh? Honors, BS

Fagherazzi S., FitzGerald D.M., Fulweiler R.W., Hughes Z., Wiberg P.L., McGlathery K.J., Morris J.T., Tolhurst T.J., Deegan L.A., Johnson D.S..  2013.  Ecogeomorphology of Salt Marshes. Treatise on Geomorphology. 12:180-200.

Fagherazzi S., FitzGerald D.M., Fulweiler R.W., Hughes Z., Wiberg P.L., McGlathery K.J., Morris J.T., Tolhurst T.J., Deegan L.A., Johnson D.S..  2013.  Ecogeomorphology of Tidal Flats. Treatise on Geomorphology. 12:201-220.

Hope A.J., McDowell W.H., Wollheim W.M..  2013.   Ecosystem metabolism and nutrient uptake in an urban, piped headwater stream. Biogeochemistry. 

Mayer L.A., Boufadel M.C., Brenner J., Carney R.S., Cooper C.K., Deming J.W., Die D.J., Eagle J., Geraci J.R., Knuth B.A. et al..  2013.  An Ecosystem Services Approach to Assessing the Impacts of the Deepwater Horizon Oil Spill in the Gulf of Mexico. :246.

Ritter A..  2013.  Effect of eutrophication on benthic microalgae. BS

Valentine K..  2013.  The Effect of Physical and Biological Processes on the erosion of Cohesive Sediments. B.S.

Freidman K..  2013.  The effects of nitrate fertilization on the physiology of a common salt marsh cordgrass species, Spartina alterniflora. M.S.

Ward E..  2013.  The effects of urbanization on the aboveground carbon storage and tree species composition in the Boston Metropolitan Region. BS:45.

Fagherazzi S..  2013.  The ephemeral life of a salt marsh. Geology. 41:943-944.

Smith J.M., Wells S.P., Mather M.E., Muth R.M..  2013.  Fish biodiversity sampling in stream ecosystems: a process for evaluating the appropriate types and amount of gear.. Aquatic Conservation: Marine and Freshwater Ecosystems. 

Fagherazzi S., Wiberg P.L., Temmerman S., Struyf E., Zhao Y., Raymond P.A.  2013.  Fluxes of water, sediments, and biogeochemical compounds in salt marshes. Ecological Processes. 

Runfola D.M., Polsky C., Giner N., Pontius, Jr. R.G., Nicolson C..  2013.  Future Suburban Development and the Environmental Implications of Lawns: A Case Study in New England, USA. Modeling of Land-use and Ecological Dynamics. :119-141.

Runfola D.M., Polsky C., Nicolson C., Giner N.M., Pontius, Jr. R.G., Krahe J., Decatur A.  2013.  A growing concern? Examining the influence of lawn size on residential water use in suburban Boston, MA, USA Landscape and Urban Planning. 119:113-123.

Kennedy C.G..  2013.  Habitat heterogeneity concentrates predators in the seascape: linking intermediate-scale estuarine habitat to striped bass distribution. MS

Hale R.L., Hoover J.H., Wollheim W.M., Vorosmarty C.J..  2013.  History of nutrient inputs to the Northeastern United States, 1930-2000.. Global Biogeochemical Cycles. 27:578-591.

Giblin A.E., Tobias C.R., Song B., Weston N., Banta G.T., Rivera-Monroy V.H..  2013.  The importance of dissimilatory nitrate reduction to ammonium (DNRA) in the nitrogen cycle of coastal ecosystems.. Oceanography. 26:124-131.

Mitwally H.M., Fleeger J.W..  2013.  Long-term nutrient enrichment elicits a weak density response by saltmarsh meiofauna. Hydrobiologia. 713:97-114.

Peters D.P.C., Laney C.M., Lugo A.E., Collins S.L., Driscoll C.T., Groffman P.M., Grove J.M., Knapp A.K., JKratz T.K., Ohman M.D. et al..  2013.  Long-Term Trends in Ecological Systems: A Basis for Understanding Responses to Global Change. . Technical Bulletin Number 1931:396.

Aldwaik S., Pontius, Jr. R.G..  2013.  Map errors that could account for deviations from a uniform intensity of land change. International Journal of Geographical Information Science . 

Runfola D.S.M., Pontius, Jr. R.G..  2013.  Measuring the temporal instability of land change using the Flow matrix. International Journal of Geographical Information Science. 

Hobbie J.E., Hobbie E.A..  2013.   Microbes in nature are limited by carbon and energy: the starving-survival lifestyle in soil and consequences for estimating microbial rates. Frontiers in Terrestrial Microbiology. 

Lockfield K., Fleeger J.W., Deegan L.A..  2013.  Mummichog, Fundulus heteroclitus, responses to long-term, whole-ecosystem nutrient enrichment.. Marine Ecological Progress Series. 492:211-222.

Foo K., Martin D., Wool C., Polsky C..  2013.  The production of urban vacant land: relational placemaking in Boston, MA neighborhoods.. Cities and the Environment. 35:156-163.

Pascal P-Y., Fleeger J.W., Boschker H.T.S., Mitwally H.M., Johnson D.S..  2013.  Response of the benthic food web to short- and long-term nutrient enrichment in saltmarsh mudflats.. Marine Ecological Progress Series. 474:27-41.

Rosenblatt A., Heithaus M.R., Mather M.E., Matich P., Nifong J.C., Ripple W.J., Silliman B.R..  2013.  The roles of large top predators in coastal ecosystems: new insights from Long-Term Ecological Research.  . Oceanography. 26:156-167.

Morris J.T., Sundberg K., Hopkinson C.S..  2013.  Salt marsh primary production and its responses to relative sea level and nutrients. Oceanography. 26:78-84.

Giner N.M., Polsky C., Pontius, Jr. R.G., Runfola D.M..  2013.  Understanding the social determinants of lawn landscapes: A fine-resolution spatial statistical analysis in suburban Boston, Massachusetts, USA.. Landscape and Urban Planning. 111:25-33.

Giner N.M..  2013.  Validating, analyzing, and predicting lawn maps: Application of GIScience and spatial analysis in the northern Boston suburbs. Ph.D.:141.

Mather M.E., Finn J.T., Kennedy C.G., Deegan L.A., Smith J.M..  2013.  What happens in an estuary doesn?t stay there: patterns of biotic connectivity resulting from long term ecological research. . Oceanography. 26:168-179.

Gober P., Larson K.L., Quay R., Polsky C., Chang H., Shandas V..  2013.  Why Land Planners and Water Managers Don't Talk to One Another and Why They Should!. Society and Natural Resources. 26:356-364.

Rakshit R..  2012.  Accuracy assessment of object-based image analysis maps. Ph.D.

Buchsbaum R.N., Wigand C.A..  2012.  Adaptive management and monitoring as fundamental tools to effective salt marsh restoration.. Restoring Tidal Flow to Salt Marshes: A Synthesis of Science and Management in New England (USA). 

Mather M.E., Frank H.J., Smith J.M., Cormier R.D., Muth R.M., Finn J.T..  2012.  Assessing freshwater habitat of adult anadromous alewives at multiple scales: a common challenge for fish and watershed restoration. . Marine and Coastal Fisheries: Dynamics, Management, and Ecosystem Science. 4:188-200.

Morris J.T., Edwards J., Crooks S., Reyes E..  2012.  Assessment of Carbon Sequestration Potential in Coastal Wetlands.. Recarbonization of the Bioshpere: Ecosystem and Global Carbon Cycle. . :517-531.

Harris E.M., Martin D.G., Polsky C., Denhardt L., Nehring A..  2012.  Beyond 'Lawn People': The role of emotions in suburban yard management practices. The Professional Geographer. 

Hopkinson C.S., Cai W-J., Hu X..  2012.  Carbon sequestration in wetland dominated coastal systems ? a global sink of rapidly diminishing magnitude. Current Opinion in Environmental Sustainability. 4:186-194.

Deegan L.A., Johnson D.S., Warren R.S., Peterson B.J., Fleeger J.W., Fagherazzi S., Wollheim W.M..  2012.  Coastal eutrophication as a driver of salt marsh loss. Nature. 490:388-392.

Chaisson C..  2012.  Factors influencing stem density in creekbank Spartina alterniflora in a New England salt marsh. BA:24.

Aldwaik S..  2012.  Fundamental concepts of intensity analysis to understand changes among categories. Ph.D.:131.

Polsky C., Pontius, Jr. R.G., Giner N., Decatur A., Runfola D.M., Rakshit R..  2012.  HERO Object-based Lawn Mapping Exploration of Suburbia: Rationale, Methods and Results for the NSF Plum Island Ecosystems Long-Term Ecological Research Site. George Perkins Marsh Institute Working Papers. 

Harris E.M., Polsky C., Larson K., Garvoille R., Martin D.G., Brumand J., Ogden L..  2012.  Heterogeneity in Residential Yard Care: Evidence from Boston, Miami, and Phoenix.. Human Ecology. 40:735-749.

Runfola D.M..  2012.  Human-environment interactions across space and time: examining lawns and land change in the United States. Ph.D.

Vieillard A.M., Fulweiler R.W..  2012.  Impacts of long-term fertilization on salt marsh tidal creek benthic nutrient and N2 gas fluxes. Marine Ecological Progress Series. 471:11-22.

Morse N.B., Wollheim W.M., Benstead J.P., McDowell W.H..  2012.  Impacts of suburbanization on food web stoichiometry in detritus-based streams of New England.. Freshwater Science. 31:1202-1213.

Aldwaik S., Pontius, Jr. R.G..  2012.  Intensity Analysis to Unify Measurements of Size and Stationarity of Land Changes by Interval, Category, and Transition.. Landscape and Urban Planning. 106:103-114.

Bain D., Green M.B., Campbell J., Chamblee J., Fraterrigo J., Kaushal S.S., Martin S., Jordan T., Parolari A., Sobczak W.V. et al..  2012.  Legacy effects material flux: structural catchment changes predate long-term studies.. Bioscience. 62:575-584.

Raciti S., Fahey T., Hall B., Driscoll C., Carranti F.J., Foster D., Gwyther P.S., Jenkins J., Hamburg S., Neill C. et al..  2012.  Local scale carbon budgets and mitigation opportunities for the Northeastern United States.. BioScience. 62:23-38.

Mariotti G., Fagherazzi S..  2012.  Modeling the effect of tides and waves on benthic biofilms.. Journal of Geophysical Research. 117

Short M.I..  2012.  Nutrient effects on Spartina patens decomposition dynamics in a New England salt marsh. BS

Pennings S., Alber M., Alexander C., Booth M., Burd A., Cai W-J., Craft C., DePratter C., Di Iorio D., Hopkinson C. et al..  2012.  South Atlantic Tidal Wetlands. Wetland Habitats of North America: Ecology and Conservation Concerns. :45-61.

Ferry K.H., Mather M.E..  2012.  Spatial and temporal diet patterns of young adult and subadult striped bass feeding in Massachusetts estuaries: trends across scales.. Marine and Coastal Fisheries: Dynamics, Management, and Ecosystem Science. 4:30-45.

Dodds W.K., Robinson C.T., Gaiser E.E., Hansen G.J.A., Powell H., Smith J.M., Morse N.B., Johnson S., Gregory S.V., Bell T. et al..  2012.  Surprises and insights from long term aquatic datasets and experiments.. Bioscience. 62:709-721.

Bain D.J., Hale R.L., Wollheim W.M..  2012.  Urban Geochemistry: Hotbeds of Biogeochemical Diversity: Insights from Urban Long-Term Ecological Research Sites. Elements. 8:435-438.

Smith J.M..  2011.  Beaver dams maintain native fish biodiversity via altered habitat heterogeneity in a coastal stream network: evaluating gear, quantifying fish assemblages, and testing ecological hypotheses with empirical data.. Ph.D.

Zhang Y..  2011.  Characterizing land changes over several points in time. M.S.

Xiang W..  2011.  Comparison of flow matrix and Markov matrix. MS 

Pontius, Jr. R.G., Millones M..  2011.  Death to Kappa: birth of quantity disagreement and allocation disagreement for accuracy assessment. International Journal of Remote Sensing. 32:4407-4429.

Burak M..  2011.  Developing standardized metrics to quantify the temporal distribution of migrating anadromous herring: comparing adult returns across coastal rivers.. M.S.

Chaudhury R..  2011.  Developing web-based "Interval, Category, and Transition Application". MS Degree

Vallino J.J..  2011.  Differences and implications in biogeochemistry from maximizing entropy production locally versus globally. Earth System Dynamics. 2:69-85.

Vieillard A., Fulweiler R.W.RW, Hughes Z., Carey J..  2011.  The ebb and flood of silica: Quantifying dissolved and biogenic silica fluxes from a temperate salt marsh. Estuarine, Coastal and Shelf Science. 95:415-423.

Testa J.M., Kemp W.M., Hopkinson C.S., Smith S.V..  2011.  Ecosystem Metabolism. Estuarine Ecology. 2:381-416.

Johnson D.S..  2011.  High-marsh invertebrates are susceptible to eutrophication. Marine Ecological Progress Series. 438:142-152.

Preheim S.P., Boucher Y., Woldschutte H., David L.A., Veneziano D., Alm E.J., Polz M.F..  2011.  Metapopulation structure of Vibrionaceae among coastal marine invertebrates. Environmental Microbiology. 13:265-275.

Bowen J.L., Ward B.B., Morrison H.G., Hobbie J.E., Valiela I., Deegan L.A., Sogin M.L..  2011.  Microbial community composition in salt marsh sediments resists perturbation by nutrient enrichment. The ISME Journal. 5:1540-1548.

Chowdhury R., Larson K., Grove M., Polsky C., Cook E., Onsted J., Ogden L.  2011.  A Multi-Scalar Approach to Theorizing Socio-Ecological Dynamics of Urban Residential Landscapes. Cities and the Environment . 4

Galvan K., Fleeger J.W., Peterson B., Drake D., Deegan L.A., Johnson D.S..  2011.  Natural abundance stable isotopes and dual isotope tracer additions help to resolve resources supporting a saltmarsh food web.. Journal of Experimental Marine Biology and Ecology. 410:1-11.

Uldahl A.G..  2011.  Nitrate reduction processes and plant N status in Spartina alterniflora dominated salt marshes. MS Degree

Beaulieu J.J, Tank J.L., Hamilton S.K, Wollheim W., Hall R., Mulholland P., Peterson B., Ashkenas L., Cooper L., Dahm C. et al..  2011.  Nitrous oxide emission from denitrification in stream and river networks. Proceedings of the National Academy of Science. 108:214-219.

Lockfield K..  2011.  Population-level responses of the mummichog, Fundulus heteroclitus, to chronic nutrient enrichment in a New England salt marsh. M.S.:75.

Rees D..  2011.  Relationship between fine green vegetation and socioeconomic factors. MS Degree

McConnell W.J., Millington J.D.A., Reo N.J., Alberti M., Asbjornsen H., Baker L.A., Brozovi? N., Drinkwater L.E., Drzyzga S.A., Fragoso J. et al..  2011.  Research on coupled human and natural Systems (CHANS): Approach, challenges and strategies. Bulletin of the Ecological Society of America. 92:218-228.

Gooseff M., Benson D.A., Briggs M.A., Weaver M., Wollheim W.M., Peterson B.J., Hopkinson C.S..  2011.  Residence time distribution in surface transient storage zones in streams: Estimation via signal deconvolution. Water Resources Research. 47:7pp.

Frank H.F., Mather M.E., Smith J.M., Muth R.M., Finn J.T..  2011.  Role of origin and release location in pre-spawning movements of anadromous alewives. Fisheries Management and Ecology. 18:12-14.

Chen H., Pontius, Jr. R.G..  2011.  Sensitivity of a land change model to pixel resolution and precision of the independent variable. Environmental Modeling & Assessment. 16:37-52.

Stewart R.J., Wollheim W.M., Gooseff M., Briggs M.A., Jacobs J.M., Peterson B.J., Hopkinson C.S..  2011.  Separation of river network scale nitrogen removal among main channel and two transient storage compartments. Water Resources Research. 47

Moseman-Valtierra A., Gonzalez R., Kroeger K.D., Tang J., Chao W.C., Crusius J., Bratton J., Green A., Shelton J..  2011.  Short-term nitrogen additions can shift a coastal wetland from a sink to a source of N2O. Atmospheric Envrionment. 45:4390-4397.

Hamill T..  2011.  Spatial methods to predict land cover. MS Degree

Pellerin B.A., Saraceno J., Shanley J.B., Sebestyn S., Aiken G.R., Wollheim W.M., Bergamaschi B.A..  2011.  Taking the pulse of snowmelt: In situ sensors reveal season, event and diurnal patterns of nitrate and dissolved organic matter variability in an upland forest stream. Biogeochemistry. 

Helton A.M., Poole G.C., Meyer J.L., Wollheim W.M., Peterson B.J., Mulholland P.J., Bernhardt E.S., Stanford J.A., Arango C., Ashkenas L.R. et al..  2011.  Thinking outside the channel: Modeling nitrogen cycling in networked river ecosystems. Frontiers in Ecology and Environment. 9:229-238.

Davey E., Wigand C., Johnson R., Sundberg K., Morris J., Roman C.T..  2011.  Use of computed tomography imaging for quantifying coarse roots, rhizomes, peat, and particle densities in marsh soils. Ecological Applications. 21:2156-2171.

Smith J.M., Mather M.E..  2011.  Using assemblage data in ecological indicators: a comparison and evaluation of commonly available statistical tools. Ecological Indicators. 13:253-262.

Bernhard A., Landry Z.C., Blevins A., Torre J.R.de al, Giblin A.E., Stahl D.A..  2010.  Abundance of ammonia-oxidizing Archaea and Bacteria along an estuarine salinity gradient in relationship to potential nitrification rates.. Applied and Environmental Microbiology. 76:1285-1289.

Pontius, Jr. R.G., Petrova S..  2010.  Assessing a predictive model of land change using uncertain data. Environmental Modeling & Software. 25:299-309.

Morris J.T.  2010.  Competition among marsh macrophytes by means of vertical geomorphological displacement. Third International Conference on Invasive Spartina. :109-115.

Travis K..  2010.  Developing validation protocols for a water database. Bachelor's Degree, High Honors

Chen H., Pontius, Jr. R.G..  2010.  Diagnostic tools to evaluate a spatial land change projection along a gradient of an explanatory variable. Landscape Ecology. 25:1319-1331.

Mather M.E., Finn J.T., Pautzke S.M., Fox D., Savoy T., III H.M.Brundage, Deegan L.A., Muth R.M..  2010.  Diversity in destinations, routes and timing of small adult and sub-adult striped bass Morone saxatilis on their southward autumn migration. Journal of Fish Biology. 77:2326-2337.

von Trapp K..  2010.  Drivers of Residential Lawn Care in Suburban Massachusetts: A Quantitative and Qualitative Analysis of Four Massachusetts Towns. Urban and Environmental Planning. 

Vallino J.J..  2010.  Ecosystem biogeochemistry considered as a distributed metabolic network ordered by maximum entropy production.. Philosophical Transactions of The Royal Society B. 365:1417-1427.

Koop-Jakobsen K., Giblin A.E..  2010.  The effect of increased nitrate loading on nitrate reduction via denitrification and DNRA in salt marsh sediments. Limnology and Oceanography. 55:789-802.

Giblin A.E., Weston N.B., Banta G.T., Tucker J., Hopkinson C.S..  2010.  The effects of salinity on nitrogen losses from an oligohaline estuarine sediment. Estuaries and Coasts. 33:1054-1068.

Weston N.B., Giblin A.E., Banta G., Hopkinson C.S., Tucker J..  2010.  The effects of varying salinity on ammonium exchange in estuarine sediments of the Parker River, Massachusetts.. Estuaries and Coasts. 33:985-1003.

Mudd S.M., D'Alpaos A., Morris J.T..  2010.  How does vegetation affect sedimentation on tidal marshes?  Investigating particle capture and hydrodynamic controls on biologically mediated sedimentation Journal of Geophysical Research. 115

Alpern J..  2010.  How to tell when map difference indicates land change. MS Degree

Morse N.B..  2010.  Impacts of suburbanization on food web stoichiometry of detritus-based streams.. M.S.

Blanchard S..  2010.  Implications of using fine versus coarse spatial resolution data in LUCC. MS Degree

Pontius, Jr. R.G., Li X..  2010.  Land transition estimates from erroneous maps. Journal of Land Use Science. 5:31-44.

Kirwan M.L., Guntenspergen G.R., D'Alpaos A., Morris J.T, Mudd S.M., Temmerman S..  2010.  Limits on the adaptability of coastal marshes to rising sea level. Geophysical Research Letters. 37

Shmookler R..  2010.  Modeling water use in the metropolitan area planning council region. MS Degree

Millette T.L., Argow B., Marcano E., Hayward C., Hopkinson C., Valentine V..  2010.  Salt marsh geomorphological analyses via integration of multi-temporal multispectral remote sensing with LIDAR and GIS.. Journal of Coastal Research. 26:809-816.

Pautzke S.M., Mather M.E., Finn J.T., Deegan L.A., Muth R.M..  2010.  Seasonal use of a New England estuary by foraging contingents of migratory striped bass. Transactions of the American Fisheries Society. 139:257-269.

Nguyen T..  2010.  Sensitivity of land cover analysis to category aggregation. MS Degree

Briggs M.A., Gooseff M.N., Peterson B.J., Morkeski K., Wollheim W.M., Hopkinson C.S..  2010.  Surface and hyporheic transient storage dynamics throughout a coastal stream network.. Water Resources Research. 46

Adjei W..  2010.  Testing the sensitivity of land change results to category aggregation. M.S.

Grubaugh C..  2010.  Top-down and bottom-up benthic macroinvertebrate communities in salt marsh ditches. Bachelor's Degree

Pontius, Jr. R.G., Neeti N..  2010.  Uncertainty in the difference between maps of future land change scenarios. Sustainability Science. 5:39-50.

Kiehn W.M., Morris J.T..  2010.  Variability in dimethylsulfoniopropionate (DMSP) in Spartina alterniflora and its effect on Littoraria irrorata.. Marine Ecology Progress Series. 406:47-55.

Hamill T..  2010.  Visualizing and computing land cover proportions. Bachelor's Degree, High Honors

Zhao L., Chen C., Vallino J., Hopkinson C., Beardsley R.C., Lin H., Lerczak J..  2010.  Wetland-estuarine-shelf interactions in the Plum Island Sound and Merrimack River in the Massachusetts coast. Journal of Geophysical Research. 115:1-13.

Guha A..  2009.  Adapting to Suburbanization-Induced Water Stress in Eastern Massachusetts: Opportunities and Constraints for Integrated Land-Use and Water Resource Management.. Graduate School of Geography. M.A.

Frank H.J., Mather M.E., Muth R.M., Pautzke S.M., Smith J.M., Finn J.T..  2009.  The Adopt-a-Herring Program as a Fisheries Conservation Tool. Fisheries. 34:496-507.

Koop-Jakobsen K., Giblin A.E..  2009.  Anammox in tidal marsh sediments: The role of salinity, nitrogen loading, and marsh vegetation. Estuaries and Coasts. 32:238-245.

Thouin J.A., Wollheim W.M., Vorosmarty C.J., Jacobs J., McDowell W.H..  2009.  The biogeochemical influences of nitrate, dissolved oxygen, and dissolved organic carbon on stream nitrate uptake.. Journal of the North American Benthological Society. 28:894-907.

Barnes R.T., Raymond P.A.  2009.  The contribution of agricultural and urban activities to inorganic carbon fluxes within temperate watersheds.. Chemical Geology. 266:318-327.

Alexander R.B., Bohlke J.F., Boyer E.W., David M., Harvey J.W., Mulholland P.J., Seitzinger S.P., Tobias C.R., Tonitto C., Wollheim W.M..  2009.  Dynamic modeling of nitrogen losses in river networks unravels the coupled effects of hydrological and biogeochemical processes. Biogeochemistry. 93:91-116.

Green M., Wollheim W.M., Basu N., Gettel G.M., Rao P., Morse N., Stewart R..  2009.  Effective denitrification scales predictably with water residence time across diverse systems. Nature Precedings. 

Buchsbaum R.N., Deegan L.A., Horowitz J., Garritt R.H., Ludlam J.P., Shull D.H.  2009.  Effects of regular salt marsh haying on marsh plants, algae, invertebrates and birds at Plum Island Sound, Massachusetts. Wetlands Ecology and Management. 17:469-487.

Charles H., Dukes J.S..  2009.  Effects of warming and altered precipitation on plant and nutrient dynamics of a New England salt marsh. Ecological Applications. 19:1758-1773.

Smith J.S., Mather M.E., Frank H.J., Muth R.M., Finn J.T., McCormick S.D..  2009.  Evaluation of a gastric radio tag insertion technique for anadromous river herring.. North American Journal of Fisheries Management. 29:367-377.

Frank H..  2009.  Evaluation of pre-spawning movements of anadromous alewives in the Ipswich River using radiotelemetry. M.S.

Haas H.L., Freeman C.J., Logan J.M., Deegan L, Gaines E.F..  2009.  Examining mummichog growth and movement: Are some individuals making intra-season migrations to optimize growth? Journal of Experimental Marine Biology and Ecology. 369:8-16.

Mudd S.M., Howell S., Morris J.T..  2009.  Impact of the dynamic feedback between sedimentation, sea level rise, and biomass production on near surface marsh stratigraphy and carbon accumulation. Estuarine, Coastal and Shelf Science. 82:377-389.

Bowen J.L., Crump B.C., Deegan L.A., Hobbie J.E..  2009.  Increased supply of ambient nitrogen has minimal effect on salt marsh bacterial production. Limnology and Oceanography . 54:713-722.

Johnson D.S., Fleeger J.W., Deegan L.A..  2009.  Large-scale manipulations reveal that top-down and bottom-up controls interact to alter habitat utilization by saltmarsh fauna. Marine Ecology Progress Series. 377:33-41.

Kirwan M.L., Guntenspergen G.R., Morris J.T..  2009.  Latitudinal trends in Spartina alterniflora productivity and the response of coastal marshes to global change. Global Change Biology. 

San Gil I., Baker K., Campbell J., Denny E.G., Vanderbilt K., Riordan B., Koskela R., Downing J., Grabner S., Melendez E. et al..  2009.  The Long-Term Ecological Research community metadata standardisation project: a progress report.. International Journal of Metadata, Semantics and Ontologies. 4:141-153.

Briggs M.A., Gooseff M.N., Arp C.D., Baker M.A..  2009.  A method for estimating surface transient storage parameters for streams with concurrent hyporheic storage. Water Resources Research. 45

Fennel K., Brady D., DiToro D., Fulweiler R.W., Gardner W.S., Giblin A., McCarthy M.J., Rao A., Seitzinger S., Thouvenot-Korppoo M. et al..  2009.  Modeling denitrification in aquatic sediments. Biogeochemistry. 93:159-178.

Polsky C., Assefa S., Del Vecchio K., Hill T., Merner L., Tercero I., Pontius, Jr. R.G..  2009.  The Mounting Risk of Drought in a Humid Landscape: Structure and Agency in Suburbanizing Massachusetts. . Sustainable Communities on a Sustainable Planet: The Human-Environment Regional Observatory Project. 

Koop-Jakobsen K., Giblin A.E..  2009.  A new approach for measuring denitrification in the rhizosphere of vegetated marsh sediments. Limnology and Oceanography, Methods. 7:626-637.

Bernot M.J., Bernot R.J., Morris J.T..  2009.  Nutrient cycling relative to ?15N and ?13C natural abundance in a coastal wetland with long-term nutrient additions. Aquatic Ecology. 

Pontius, Jr. R.G., Connors J..  2009.  Range of categorical associations for comparison of maps with mixed pixels. Photogrammetric Engineering & Remote Sensing. 75:963-969.

Harrison J., Maranger R., Alexander R.B., Cornwell J., Giblin A., Jacinthe P., Mayorga E., Seitzinger S., Wollheim W.M..  2009.  The regional and global significance of reactive N removal in lakes and reservoirs. Biogeochemistry. 93:147-158.

Kiehn W.M, Morris J.T..  2009.  Relationships Between Spartina alterniflora and Littoraria irrorata in a South Carolina Salt Marsh. Wetlands. 29:818-825.

Drake D.C., Peterson B.J., Galván K.A., Deegan L.A., Fleeger J.W., Hopkinson C., Johnson J.M., Koop-Jakobsen K., Lemay L.E., Miller E.E. et al..  2009.  Salt marsh ecosystem biogeochemical responses to nutrient enrichment: A paired 15N tracer study.. Ecology. 90:2535-2546.

Bowen J.L., Crump B.C., Deegan L.A., Hobbie J.E..  2009.  Salt marsh sediment bacteria: their distribution and response to external nutrient inputs. The ISME Journal. 3:924-934.

Broo S..  2009.  Sensitivity Analysis for Scenarios of Water Withdrawal in Massachusetts. M.S.

Stewart R..  2009.  Separation of river network scale nitrogen removal between surface and hyporheic transient storage compartments.. M.S.

Buchsbaum R..  2009.  Striped bass: the coastal connection.. Sanctuary. 48:9-11.

Mather M.E., Finn J.T., Ferry K.H., Deegan L.A., Nelson G.A..  2009.  Use of non-natal estuaries by migratory striped bass (Morone saxatilis) in summer. Fishery Bulletin. 107:329-337.

Mozdzer T.J..  2009.  Variation in the availability and utilization of dissolved organic nitrogen by the smooth cordgrass, Spartina alterniflora. PhD.:179.

Johnson D.S., Fleeger J.W..  2009.  Weak response of saltmarsh infauna to ecosystem-wide nutrient enrichment and fish predator reduction: A four-year study. Journal of Experimental Marine Biology and Ecology. 373:35-44.

Frank H., Mather M.E., Muth R.M., Pautzke S.M., Smith J.M., Finn J.T., McCormick S.D..  2009.  What is 'fallback': metrics needed to assess telemetry tag effects on anadromous fish behaviour. Hydrobiologia. 35:237-249.

Thouin J..  2008.  The biogeochemical influences of nitrate, dissolved oxygen, and dissolved organic carbon on stream nitrate uptake. M.S.

Battin T.J., Kaplan L., Findlay S., Hopkinson C., Marti E., Packman A., Newbold J.D., Sabater F..  2008.  Biophysical controls on organic carbon fluxes in fluvial networks. Nature Geoscience. 1:95-100.

Day J.W., Christian R.R., Boesch D.M., Yanez-Arancibia A., Morris J.T., Twilley R.R., Naylor L., Schaffner L., Stevenson C..  2008.  Consequences of climate change on the ecogeomorphology of coastal wetlands. Estuaries and Coasts. 31:477-491.

San Gil I., Sheldon W., Schmidt T., Servilaa M., Aguilar R., Gries C., Gray T., Field D., Cole J., J. Pan Y et al..  2008.  Defining Linkages between the GSC and NSF's LTER Program: How the Ecological Metadata Language (EML) Relates to GCDML and Other Outcomes. Omics. 12:151-156.

Galván K.A..  2008.  The diet of saltmarsh invertebrates. Ph.D.:238.

Pautzke S.M..  2008.  Distribution patterns of migratory striped bass in Plum Island estuary, Massachusetts. M.S.

Johnson D.S., Jessen B.J..  2008.  Do spur-throated grasshoppers, Melanoplus spp. (Orthoptera: Acrididae), exert top-down control on smooth cordgrass Spartinaalterniflora in northern New England? Estuaries and Coasts. 31:912-919.

Wollheim W.M., Peterson B.J., Vorosmarty C., Hopkinson C., Thomas S.A..  2008.  Dynamics of N removal over annual time scales in a suburban river network. Journal of Geophysical Research-Biogeosciences. 113

Pontius, Jr. R.G., Li X..  2008.  Estimating the land transition matrix based on erroneous maps. Conference proceedings of Studying, Modeling and Sense Making of Planet Earth. :8.

Wollheim W.M., Vorosmarty C.J., Bouwman A.F., Green P.A., Harrison J., Linder E., Peterson B.J., Green P.A., Seitzinger S., Syvitski J.P.M..  2008.  Global N removal by freshwater aquatic systems A spatially distributed, within-basin approach. Global Biogeochemical Cycles. 22

Koop-Jakobsen K..  2008.  The impact of increased Nitrogen Loading on Gaseous Loss of Nitrogen from Salt Marsh Sediments. Ph.D.

Grimm N., Foster D., Groffman P., Grove M., Hopkinson C., Nadelhoffer K., Pataki D., Peters D..  2008.  Land change: Ecosystem responses to urbanization and pollution across climatic and societal gradients. Frontiers in Ecology and Environment. 6:264-272.

Gardner L.R., Gaines E.F..  2008.  A method for estimating pore water drainage from marsh soils using rainfall and well records. Estuarine, Coastal and Shelf Science. 79:51-58.

Hopkinson C., Giblin A..  2008.  Nitrogen Dynamics of Coastal Salt Marshes. Nitrogen in the Marine Environment, 2nd Edition. :991-1036.

Drake D.C., Peterson B.J., Deegan L.A., Harris L.A., Miller E.E., Warren R.S..  2008.  Plant nitrogen dynamics in fertilized and natural New England saltmarshes: a paired 15N tracer study. Marine Ecology Progress Series. 354:35-46.

Galvan K., Fleeger J.W., Fry B..  2008.  Stable isotope addition reveals dietary importance of phytoplankton and microphytobenthos to saltmarsh infauna. Marine Ecology Progress Series. 359:37-49.

Fry B., Cieri M., Hughes J., Tobias C., Deegan L.A., Peterson B..  2008.  Stable isotope monitoring of benthic-pelagic coupling with salt marsh fish. Marine Ecology Progress Series. 369:193-204.

Mulholland P.J, Helton A.M, Poole G.C., , Hamilton S.K, Peterson B.J, Tank J.L., Ashkenas L.R., Cooper L.W, Dahm C.N et al..  2008.  Stream denitrification across biomes and its response to anthropogenic nitrate loading. Nature. 452:202-206.

Buchsbaum R., Powell J.C..  2008.  Symposium Review: Long term shifts in faunal assemblages in North American estuaries: A review of a workshop held at the biennial meeting of the Coastal and Estuarine Research Federation (CERF), November 2007, Providence, Rhode Island.. Reviews in Fisheries Biology and Fisheries. 18:447-450.

Fleeger J.W., Johnson D.S., Galván K.A., Deegan L.A..  2008.  Top-down and bottom-up control of infauna varies across the saltmarsh landscape. Journal of Experimental Marine Biology and Ecology. 357:20-34.

Johnson D.S..  2008.  Trophic control of saltmarsh invertebrates. Ph.D.

Hopkinson C.S., Lugo A.E., Alber M., Covich A., van Bloem S..  2008.  Understanding and forecasting the effects of sea level rise and intense windstorms on coastal and upland ecosystems: the need for a continental-scale netowrk of observatories. Frontiers in Ecology and Environment. 6:255-263.

Pellerin B.A., Wollheim W.M., Feng X., Vorosmarty C.J..  2007.  The application of electrical conductivity as a tracer for hydrograph separation in urban catchments.. Hydrological Processes. 22:1810-1818.

Hill T., Polsky C..  2007.  Development and drought in suburbia: A mixed methods rapid assessment of vulnerability to drought in rainy Massachusetts. . Environmental Hazards: Human and Policy Dimensions. 7:291-301.

Morris J.T.  2007.  Ecological engineering in intertidal saltmarshes.. Hydrobiologia. 577:161-168.

Charles H..  2007.  Effects of Warming and Altered Precipitation on Plant and Nutrient Dynamics of a New England Salt Marsh. M.S.:82.

Zappa C.J., McGillis W.R., Raymond P.A., Edson J.B., Hintsa E.J., Zemmelink H.J., Dacey J.W.H., Ho D.T..  2007.  Environmental turbulent mixing controls on air-water gas exchange in marine and aquatic systems. Geophysical Research Letters. 34

Morris J.T..  2007.  Estimating net primary production of salt marsh macrophytes. Principles and Standards for Measuring Primary Production. :106-119.

Bernhard A.E., Tucker J., Giblin A.E., Stahl D.A..  2007.  Functionally distinct communities of ammonia-oxidizing bacteria along an estuarine salinity gradient. Environmental Microbiology. 9:1439-1447.

Lemay L.E..  2007.  The impact of drainage ditches on salt marsh flow patterns, sedimentation and morphology:  Rowley River, Massachusetts. M.S.

Parmentier B., Pontius, Jr. R.G..  2007.  Improvements in the use of the ROC statistic for landscape ecology. Conference proceedings of the World Congress of the International Association for Landscape Ecology. :2.

Luciano K.E..  2007.  Investigation into the relationship between morphology and tidal flux in ditched and non-ditched salt marsh creek systems, Rowley, Massachusetts. B.S.

Deegan L.A., Bowen J.L., Drake D.C., Fleeger J.W., Friedrichs C.T., Galván K.A., Hobbie J.E., Hopkinson C., Johnson D.S., Johnson J.M. et al..  2007.  Susceptibility of salt marshes to nutrient enrichment and predator removal. Ecological Applications. 17:S-42-S63.

Johnson D.S., Fleeger J.W., Galván K.A., Moser E.B..  2007.  Worm holes and their space-time continuum: Spatial and temporal variability of macroinfaunal annelids in a northern New England salt marsh. Estuaries and Coasts. 30:226-237.

Harris L.A., Duarte C.M., Nixon S.W..  2006.  Allometric laws and prediction in estuarine and coastal ecology (Invited essay Perspectives section). Estuaries and Coasts. 29:340-344.

Bouillon S., Boschker H.T.S..  2006.  Bacterial carbon sources in coastal sediments: a cross-system analysis based on stable isotope data of biomarkers. Biogeosciences. 3:175-185.

Buchsbaum R., Catena E.H., James-Pirri M.J..  2006.  Changes in salt marsh vegetation, Phragmites australis, and nekton in response to increased tidal flushing in a New England salt marsh.. Wetlands. 26:544-557.

Morris J.T..  2006.  Competition among marsh macrophytes by means of geomorphological displacement in the intertidal zone.. Estuarine and Coastal Shelf Science. 69:395-402.

Claessens L., Hopkinson C., Rastetter E., Vallino J..  2006.  Effect of historical changes in land use and climate on the water budget of an urbanizing watershed. Water Resources Research. 42

Pontius, Jr. R.G., Connors J..  2006.  Expanding the conceptual, mathematical, and practical methods for map comparison. Conference proceedings of the meeting of Spatial Accuracy 2006. :16.

Miller E.E..  2006.  Experimental nutrient enrichment of a New England salt marsh: plant productivity and community composition responses. M.S.

Farber S, Costanza D., Childers D., Erikson J., Gross K., Grove M., Hopkinson C., Kahn J., Pincetl S., Troy A. et al..  2006.  Linking ecology and economics for ecosystem management. BioScience. 56:121-134.

Wollheim W.M., Vorosmarty C.J., Peterson B.J., Seitzinger S.P., Hopkinson C.S..  2006.  Relationship between river size and nutrient removal.. Geophysical Research Letters. 33

Oczkowski A.J., Pellerin B.A., Hunt C.W., Wollheim W.M., Vorosmarty C.J., Loder T.C..  2006.  The role of snowmelt and spring rainfall in inorganic nutrient fluxes from a large temperate watershed, the Androscoggin River basin (Maine and New Hampshire).. Biogeochemistry. 80:217-234.

Torres R., Fagherazzi S., van Proosdij D., Hopkinson C..  2006.  Salt marsh geomorphology: Physical and ecological effects on landform. Estuarine, Coastal and Shelf Science. 69:309-310.

Logan J., Hass H., Deegan L.A., Gaines E..  2006.  Turnover rates of nitrogen stable isotopes in the salt marsh mummichog, Fundulus heteroclitus, following a laboratory diet switch.. Oecologia. 147:391-395.

Pontius, Jr. R.G., Versluis A.J., Malizia N.R..  2006.  Visualizing certainty of extrapolations from models of land change.. Landscape Ecology. 21:1151-1166.

Hill T., Polsky C..  2005.  Adaptation to Drought in the Context of Suburban Sprawl and Abundant Rainfall.. Geographical Bulletin. 47:85-100.

Morris J.T., Christian R.R., Ulanowicz R.E..  2005.  Analysis of size and complexity of randomly constructed food webs by information theoretic metrics.. Aquatic Food Webs: an Ecosystem Approach. :73-85.

Wollheim W.M..  2005.  The controls of watershed nutrient export. Ph.D.

Huang X., Morris J.T..  2005.  Distribution of phosphatase activity in marsh sediments along an estuarine salinity gradient.. Marine Ecological Progress Series. 292:75-83.

Deegan L.A., Buchsbaum R..  2005.  The effect of habitat loss and degradation on fisheries.. The Decline of Fisheries Resources in New England: Evaluating the Impact of Overfishing, Contamination, and Habitat Degradation. MITSG 05-5:67-96.

Morris J.T..  2005.  Effects of changes in sea level and productivity on the stability of intertidal marshes.. UNESCO Proceeding Series on Lagoons and Coastal Wetlands in the Global Change Context: Impact and Management Issues. :121-127.

Randall J..  2005.  The effects of nutrient enrichment and predator removal on algal communities in a New England Marsh.. B.S.

Hopkinson C.S., Vallino J..  2005.  Efficient export of carbon to the deep ocean through dissolved organic matter.. Nature. 433:142-145.

Vallino J., Hopkinson C.S., Garritt R.H..  2005.  Estimating estuarine gross production, community respiration and net ecosystem production: A nonlinear inverse technique.. Ecological Modeling. 187:281-296.

Meybeck M., Vorosmarty C.J..  2005.  Fluvial filtering of land to ocean fluxes: from Holocene variations to Anthrocene.. Compte Rendus. 337:107-123.

Thompson J.R., Pacocha S., Pharino C., Klepac-Ceraj V., Hunt D.E., Benoit J., Sarma-Rupavtarm R., Distel D.L., Polz M.F..  2005.  Genotypic diversity within a natural coastal bacterioplankton population.. Science. 307:1311-1313.

Sorrensen C., Polsky C., Neff R..  2005.  The HERO REU Experience: Undergraduate Research on Vulnerability to Climate Change in Local Places.. Geographical Bulletin. 47:65-72.

Morris J.T, Porter D., Neet M., Noble P.A., Schmidt L., Lapine L.A., Jensen J..  2005.  Integrating LIDAR, multispectral imagery and neural network modeling techniques for marsh classification.. International Journal of Remote Sensing. 26:5221-5234.

Wan Z., Vallino J..  2005.  An inverse ecosystem model of year-to-year variations with first order approximation to the annual mean fluxes.. Ecological Modeling. 187:369-388.

Bernhard A., Donn T.M., Giblin A.E., Stahl D.A..  2005.  Loss of Diversity of Ammonia-Oxidizing Bacteria Correlates with Increasing Salinity in an Estuary System.. Environmental Microbiology. 7:1289-1297.

Bahr M., Crump B.C., Klepac-Ceraj V., Teske A.P., Sogin M.L., Hobbie J.E..  2005.  Molecular characterization of sulfate-reducing bacteria in a New England salt marsh.. Environmental Microbiology. 7:1175-1185.

Wollheim W., Pellerin B., Vorosmarty C., Hopkinson C..  2005.  N retention in urbanizing headwater catchments. Ecosystems. 8:871-884.

Williams M., Hopkinson C., Rastetter E., Vallino J., Claussens L..  2005.  Relationships of land use and streamwater solute concentrations in the Ipswich River basin, northeastern Massachusetts.. Water, Air, and Soil Pollution. 161

Fedorko E.J., Pontius, Jr. R.G., Aldrich S.P., Claessens L., Hopkinson C., Wollheim W.M..  2005.  Spatial distribution of land type in regression models of pollutant loading. Journal of Spatial Hydrology. 5:60-80.

Pontius, Jr. R.G., Fedorko E..  2005.  Spatial distribution of land type in regression models of pollutant loading.. Conference Proceedings of the meeting of the American Society for Photogrammetry and Remote Sensing. :5.

Crump B.C., Hobbie J.E..  2005.  Synchrony and seasonality in bacterioplankton communities of two temperate rivers. Limnology and Oceanography. 50:1718-1729.

Pontius, Jr. R.G., Versluis A.J., Malizia N.R..  2005.  Visualizing the certainty for extrapolations from models of landscape change. Conference proceedings of the meeting of Geocomputation. :6.

Salgado J., Costa M-J., Cabral H., Deegan L..  2004.  Comparison of fish assemblages in tidal salt marsh creeks and in adjoining mudflat areas in the Tejo estuary.. Cahiers de Biologie Marine. 45:213-224.

Raymond P.A., Bauer J.E., Caraco N.F., Cole J.J., Longworth B., Petsch S.T..  2004.  Controls on the variability of organic matter and dissolved inorganic carbon age in northeast U.S. rivers. Marine Chemistry. 92:353-366.

Kerry J., Boorse D., Buchsbaum R..  2004.  Effect of nutrient enrichment  and salinity on salt marsh invertebrates in the Plum Island Estuary.. Biological Bulletin. 207:174.

Sheldon S.P., Twichell S., Deegan L.A..  2004.  The effects of long term nutrient addition on a salt marsh community.. New England Estuarine Research Society (NEERS), March 7-9, 2004. 

Hopkinson C., Smith E..  2004.  Estuarine respiration: an overview of benthic, pelagic, and whole system respiration . Respiration in Aquatic Ecosystems. :122-146.

Lee W.M.  2004.  Factors affecting sedimentation patterns of a tidal marsh in Plum Island Sound Estuary, Massachusetts.. Department of Geology. B.S.

Acinas S.G., Klepac-Ceraj K., Hunt D.E., Pharino C., Ceraj C., Distel D.L., Polz M.F..  2004.  Fine-scale phylogenetic architecture of a complex bacterial community.. Nature. 430:551-554.

Nielsen J.L., Schramm A., Bernhard A.E., EnghG.J. vanden, Stahl D.A..  2004.  Flow Cytometry-Assisted Cloning of Specific Sequence Motifs from Complex 16S rRNA Gene Libraries. Applied and Environmental Microbiology. 70:7550-7554.

Mudd S.M., Fagherazzi S., Morris J.T., Furbish D.J..  2004.  Flow, sedimentation, and biomass production on a vegetated salt marsh in South Carolina: toward a predictive model of marsh morphologic and ecologic evolution.. The Ecogeomorphology of Tidal Marshes. :165-187.

Klepac-Ceraj V., Bahr M., Crump B.C., Teske A.P., Hobbie J.E., Poltz M.F..  2004.  High overall diversity and dominance of microdiverse relationships in salt marsh sulfate-reducing bacteria.. Environmental Microbiology. 6:686-698.

Pellerin B.A.  2004.  The influence of urbanization on runoff generation and stream chemistry in Massachusetts watersheds.. Ph.D.

Clement J., Holmes R.M., Peterson B.J., Pinlay G..  2004.  Isotopic investigation of nitrogen retention in a riparian ecosystem.. Journal of Applied Ecology. 40:1035-1048.

Crump B.C., Hopkinson C.S., Sogin M.L., Hobbie J.H..  2004.  Microbial biogeography along an estuarine salinity gradient: the combined influences of bacterial growth and residence time.. Applied and Environmental Microbiology. 70:1494-1505.

Filoso S., Vallino J.J, Hopkinson C., Rastetter E., Claessens L..  2004.  Modeling Nitrogen Transport in the Ipswich River Basin, Massachusetts, Using HSPF.. Journal of the American Water Resources Association. 40:1365-1384.

Williams M., Hopkinson C., Rastetter E., Vallino J..  2004.  N budgets and aquatic uptake in the Ipswich River basin, northeastern Massachusetts.. Water Resources Research. 40:1-12.

Salgado J., Costa M-J., Cabral H., Deegan L..  2004.  Nekton use of salt marsh creeks in the upper Tejo Estuary.. Estuaries. 27:818-825.

Pellerin B.A., Wollheim W., Hopkinson C., McDowell W., Williams M., Vorosmarty C., Daley M..  2004.  Role of wetlands and developed land use on dissolved organic nitrogen concentrations and DON / TDN in northeastern U.S. rivers and streams. Limnology and Oceanography. 49:910-918.

Fagherazzi S., Torres R., Hopkinson C., vanProosdij D..  2004.  The Salt Marsh Geomorphology: Physical and Ecological Effects on Landform. AGU Chapman Conference. 86:57-58.

Pontius, Jr. R.G., Huffaker D., Denman K..  2004.  Useful techniques of validation for spatially explicit land-change models.. Ecological Modeling. 179:445-461.

Versluis A.J., Pontius, Jr. R.G., Malizia N.R..  2004.  Visualizing the rate at which the accuracy of a land change prediction decays.. Conference proceedings of the meeting of the University Consortium for Geographic Information Science. :29.

Freeman C.J., Haas H., Warren S., Deegan L.A., Logan J..  2004.  What makes mummichogs grow?  The relationship between growth rates and gut contents of Fundulus heteroclitus held in enclosures along a salinity gradient in a New England salt marsh. New England Estuarine Research Society (NEERS). 

Koop-Jakobsen K..  2003.  Ammonium dynamics in tidal salt marshes - an experimental study of ammonium adsorption, tidal flushing and ammonium volatilization. M.S.:63.

Walter J.F., Overton A.S., Ferry K.H., Mather M.E..  2003.  Atlantic coast feeding habits of striped bass: a synthesis of data supporting a comprehensive coast-wide understanding of the trophic biology. Fisheries Management and Ecology. 10:349-360.

Holden M, Lippitt C., Pontius, Jr. R.G., Williams C..  2003.  Building a database of historic land cover to detect landscape change.. Biological Bulletin. 205:257-258.

S. Fantroussi E, Urakawa H., Bernhard A.E., Kelly J.J., Noble P.A., Stahl D.A..  2003.  Direct profiling of environmental microbial populations by thermal dissociation analysis of native ribosomal RNAs hybridized to oligonucleotide microarrays.. Applied Environmental Microbiology. 69:2377-2382.

Kratz T.K., Deegan L.A., Harmon M.E., Lauenroth W.K..  2003.  Ecological Variability in Space and Time: Insights Gained from the US LTER Program . BioSciences. 53:57-67.

Raymond P.A, Hopkinson C.S..  2003.  Ecosystem modulation of dissolved carbon age in a temperate marsh dominated estuary.. Ecosystems. 6:694-705.

Twitchell S..  2003.  The effects of long term nutrient addition on a salt marsh community. B.S.

Pontius, Jr. R.G., Agrawal A., Huffaker D..  2003.  Estimating the uncertainty of land-cover extrapolations while constructing a raster map from tabular data.. Journal of Gegraphical Systems. 5:253-273.

Ferry K..  2003.  Factors driving distribution of migratory striped bass across Massachusetts estuaries: predator-prey interactions and implications for multispecies management.. Natural Resource Conservation. M.S.

Agnew A.M., Shull D.H., Buchsbaum R.N..  2003.  Growth of a salt marsh invertebrate on several species of marsh grass detritus.. Biological Bulletin. 205:238-239.

Johnston M.E, Cavatorta J.R., Hopkinson C.S., Valentine V..  2003.  Importance of metabolism in the development of salt marsh ponds.. Biological Bulletin. 205:248-249.

Vallino J.J..  2003.  Modeling microbial consortiums as distributed metabolic networks. Biological Bulletin. 204:174-179.

Driscoll C., Whitall D., Aber J., Boyer E., Castro M., Cronan C., Goodale C., Groffman P., Hopkinson C., Lambert K. et al..  2003.  Nitrogen pollution in the northeastern United States: Sources, effects and managment options. BioScience. 53:357-374.

Cavatorta J., Johnston M., Hopkinson C.S., Valentine V..  2003.  Patterns of sedimentation in a salt marsh-dominated estuary.. Biological Bulletin. 205:239-241.

Sundareshwar P.V., Morris J.T., Koepfler E.K., Fornwalt B..  2003.  Phosphorus Limitation of Coastal Ecosystem Processes. Science. 299

Green P.A., Vorosmarty C.J., Meybeck M., Galloway J.N., Peterson B.J., Boyer E.W..  2003.  Pre-industrial and contemporary fluxes of nitrogen through rivers: A global assessment based on typology. Biogeochemistry. 68:1-35.

Tobias C.R., Cieri M., Peterson B.J., Deegan L.A., Vallino J., Hughes J..  2003.  Processing watershed-derived nitrogen in a well-flushed New England estuary.. Limnology and Oceanography. 48:1766-1778.

Zwart G., van Hannen E.J., van Agerveld M.P.Kamst-, van der Gucht K., Lindstrom E.S., Van Wichelen J., Lauridsen T., Crump B.C., Han S.K., Declerck S..  2003.  Rapid screening for freshwater bacterial groups using reverse line blot hybridization. Applied Environmental Microbiology. 69:5875-5883.

Giblin A.E, Vallino J..  2003.  The Role of Models in Addressing Coastal Eutrophication Problems. The Role of Models in Ecosystems Science. :327-343.

Poltz M.F., Bertilsson S., Acinas S.G., Hunt D..  2003.  A (r)Ray of hope in analysis of function and diversity of microbial communities. Biological Bulletin. 204:196-199.

Huffaker D..  2003.  The scale at which land change models are accurate.. B.S.

Hobbie J.E., Carpenter S.R., Grimm N.B., Gosz J.R., Seastedt T.R..  2003.  Scientific accomplishments of the Long Term Ecological Research program: an introduction. BioSciences. 53:17-20.

Tobias C., Giblin A.E., McClelland J., Tucker J., Peterson B..  2003.  Sediment DIN fluxes and preferential recycling of benthic microalgal nitrogen in shallow macrotidal estuary. Marine Ecological Progress Series. 257:25-36.

Machas R., Santos R., Peterson B..  2003.  Tracing the flow of organic matter from primary producers to filter feeders in Ria Formosa Lagoon, Southern Portugal. Estuaries. 26:846-856.

Hobbie J., Carpenter S., Grimm N., Gosz J., Seastedt T..  2003.  The United States Long Term Ecological Research program.. BioSciences. 53:21-32.

Zappa C.J, Raymond P.A., Terray E.A., McGillis W.R..  2003.  Variation in surface turbulence and the gas transfer velocity in estuaries over a tidal cycle in a macrotidal estuary.. Estuaries. 26:1401-1415.

Levine U.Y., Crump B.C..  2002.  Bacterioplankton Community Composition in Flowing Waters of the Ipswich River Watershed. Biological Bulletin. 203:251-252.

Buchsbaum R., Deegan L., Garritt R..  2002.  Changes in the fish comunity of Plum Island Sound from 1965 through 1994.. In: The marine resources of the Parker River-Plum Island Sound estuary: An update after 30 years.. 

Lunsford T.L..  2002.  Comparison of the fate of dissolved organic matter in two coastal systems: Hog Island Bay, VA (USA) and Plum Island Sound, MA (USA). School of Marine Science. M.S.:89.

Hopkinson C.S., Vallino J., Nolin A..  2002.  Decomposition of dissolved organic matter from the continental margin. Deep Sea Research II. 49:4461-4478.

LaMontange M.G., Giblin A.E., Valiela I..  2002.  Denitrification and the stoichiometery of nutrient regeneration in Waquoit Bay, MA. Estuaries. 25:272-281.

Ludlam J.P., Shull D.H., Buchsbaum R..  2002.  Effects of haying on salt marsh surface invertebrates. Biological Bulletin. 203:250-251.

Deegan L.A..  2002.  Effects of trawling and dredging on seafloor habitat.. Committee on Ecosystem Effects of Fishing<br/>. :107pp..

Head J..  2002.  Identifying impermeable surface from remotely sensed images. M.S.

Moore N..  2002.  A leakage detection model for determining the value of conservation. M.S.

Deegan L.A..  2002.  Lessons learned: the effects of nutrient enrichment on the support of nekton by seagrass and saltmarsh ecosystems.. Estuaries. 25:585-600.

Buchsbaum R., Purinton T., Magnusson B..  2002.  The marine resources of the Parker River-Plum Island Sound estuary: An update after 30 years. 

Parker D..  2002.  A method to produce hydrologically corrected DEMs. M.S.

Neckles H., Dionne M., Burdick D., Buchsbaum R., Diers T., Hutchins E., Roman C..  2002.  A monitoring protocol to assess tidal restoration of salt marshes on local and regional scales. Restoration Ecology. 10:556-563.

Driscoll C., Whitall D., Aber J., Boyer E., Castor M., Cronan C., Goodale C., Groffman P., Lambert K., Lawrence G. et al..  2002.  Nitrogen Pollution: From sources to the sea.. :4p..

Huffaker D., Pontius, Jr. R.G..  2002.  Reconstruction of Historical Land Cover in the Ipswich Watershed.. Biological Bulletin. 203:253-254.

Morris J., Sundareshwar P.V., Nietch C.T., Kjerfve B, Cahoon D.R..  2002.  Responses of coastal wetlands to rising sea level. Ecology. 83:2869-2877.

Koop-Jakobsen K., Giblin A.E..  2002.  Tidal flushing of ammonium from intertidal salt marsh sediments - the relative importance of adsorbed ammonium. Biological Bulletin. 203:258-259.

Zwart G., Crump B.C., van Agterveld M.P.Kamst-, Hagen F., Han S.K..  2002.  Typical freshwater bacteria: an analysis of available 16S rRNA gene sequences from plankton of freshwater lakes and rivers.. Aquatic Microbial Ecology. 28:141-155.

Pontius, Jr. R.G., Agrawal A., Huffaker D..  2002.  Uncertainty Analysis in Land Change Modeling: Constucting a Gridded Map from Tabular Data.. The Second International Conference on Geographic Information Science. :141-142.

Aldrich S..  2002.  Water quality as a function of land use.. B.S.

Hopkinson C.S, Giblin A.E., Tucker J..  2001.  Benthic metabolism and nutrient regeneration on the continental shelf off eastern Massachusetts, USA. Marine Ecology Progress Series. 224:1-19.

Raymond P.A, Bauer J.E..  2001.  DOC cycling in a temperate estuary: A mass balance approach using natural 14C and 13C isotopes. Limnology and Oceanography. 46:655-667.

Williams L., IV G.C.Noblitt, Buchsbaum R..  2001.  The effects of salt marsh haying on benthic algal biomass. Biological Bulletin. 201:287-288.

Haines J..  2001.  The feeding ecology of mummichog and Atlantic silversides in the Rowley River.. B.S.

Raymond P.A, Cole J.J..  2001.  Gas exchange in rivers and estuaries: Choosing a gas transfer velocity. Estuaries. 24:312-217.

Emeis K.C, Benoit J.R., Deegan L., Gilbert A.J., Lee V., Glade J.M., Meybeck M., Olsen S.B., Von Bodungen B..  2001.  Group 4: Unifying concepts for integrated coastal management.. Science and Integrated Coastal Management. 

Tada T..  2001.  Land use and nitrate loading in small stream catchments. M.S.

Pontius, Jr. R.G., Schneider L..  2001.  Land-use change model validation by a ROC method for the Ipswich watershed, Massachusetts, USA. Agriculture, Ecosystems & Environment. 85:239-248.

Greenbaum A.H.  2001.  Long-term fate of heavy metals in sediments of a Massachusetts salt marsh.. B.S.

Schneider L., Pontius, Jr. R.G..  2001.  Modeling land-use change in the Ipswich watershed, Massachusetts, USA. Agriculture, Ecosystems & Environment. 85:83-94.

Sundareshwar P.V., Morris J.T., Pellechia P.J., Cohen H.J., Porter D.E., Jones B.C..  2001.  Occurrence and Ecological Implications of Pyrophosphate in Estuaries. Limnology and Oceanography. 46:1570-1577.

Nelson A..  2001.  Quantifying the effectivness of conservation projects 1.. M.S.

Pieri N..  2001.  Quantifying the effectivness of conservation projects 2.. M.S.

Raymond P.A, Bauer J.E..  2001.  Riverine export of aged terrestrial organic matter to the North Atlantic Ocean.. Nature. 409:497-500.

Horowitz J..  2001.  Stable istopic analysis of food webs in hayed and reference salt marshes. B.S.

Agrawal A..  2001.  Uncertainty analysis of land-use change modeling in GIS. M.S.

Raymond P.A, Bauer J.E..  2001.  Use of 14C and 13C natural abundances for evaluating riverine, estuarine, and coastal DOC and POC sources and cycling: Review and Synthesis. Organic Geochemistry. 32:469-485.

Deegan L.A, Kremer J., Webler T., Brawley J..  2001.  The use of models in integrated resource management in the coastal zone.. Science and Integrated Coastal Management. 

Burdick D., Buchsbaum R., Holt E..  2001.  Variation in soil salinity associated with the expansion of Phragmites australis in salt marshes. Environmental and Experimental Botany. 46:247-261.

Raymond P.A, Bauer J.E., Cole J.J..  2000.  Atmospheric CO2 evasion, dissolved inorganic carbon production, and net heterotrophy in the York River Estuary.. Limnology and Oceanography. 45:1707-1717.

Raymond P.A., Bauer J.E..  2000.  Bacterial consumption of DOC during transport through a temperate estuary. Aquatic Microbial Ecology. 22:1-12.

Holt E., Buchsbaum R..  2000.  Bird use of Phragmites australis in coastal marshes of northern Massachusetts.. Proceedings of the 1st National Conference on Marine Bioinvasions. Jan 24-27, 1999:232-240.

Howarth R.W, Anderson D., Church T., Greening H., Hopkinson C., Huber W., Marcus N., Naiman R., Segerson K., Sharpley A. et al..  2000.  Clean Coastal Waters: Understanding and reducing the effects of nutrient pollution.. Ocean Studies Board and Water Science and Technology Board, Commission on Geosciences, Environment, and Resources, National Research Council.. 

Greenbaum A., Giblin A..  2000.  Differences in properties of salt marsh sediment between hayed and reference sites. Biological Bulletin. 199:225-226.

Mendelssohn I.A, Morris J.T..  2000.  Ecophysiological controls on the growth of Spartina alterniflora. Concepts and Controversies in Tidal Marsh Ecology. :59-80.

Morris J.T.  2000.  Effects of sea level anomalies on estuarine processes.. Estuarine Science: A Synthetic Approach to Research and Practice. :107-127.

Hobbie J..  2000.  Estuarine Science: A Synthetic Approach to Research and Practice. :539.

Hobbie J.E.  2000.  Estuarine Science: The key to progress in coastal ecological research. Estuarine Science: A Synthetic Approach to Research and Practice. :1-16.

Simenstad C., Brandt S., Chalmers A., Dame R., Deegan L., Hodson R., Houde E..  2000.  Habitat-biotic interactions. Estuarine Science: A Synthetic Approach to Research and Practice. :427-460.

Vallino J..  2000.  Improving marine ecosystem models: Use of data assimilation and mesocosm experiments.. Journal of Marine Research. 58:117-164.

Geyer W.R, Morris J., Prahl F., Jay D.  2000.  Interaction between physical processes and ecosystem structure: A comparative approach.. Estuarine Science: A Synthetic Approach to Research and Practice. :177-206.

Kremer J., Kemp W., Giblin A., Valiela I., Seitzinger S., Hoffman E..  2000.  Linking biogeochemical processes to higher trophic levels. Estuarine Science, A Synthetic Approach to Research and Practice. :299-246.

Vorosmarty C., Peterson B..  2000.  Macro-scale models of water and nutrient flux to the coastal zone. Estuarine Science: A Synthetic Approach to Research and Practice. :43-80.

Allee R.J., Dethier M., Brown D., Deegan L., Ford R.G., Hourigan T.F., Maragos J., Schoch C., Sealey K., Twilley R. et al..  2000.  Marine and Estuarine Ecosystem and Habitat Classification. 

Krest J.M, Moore W.S., Gardner L.R., Morris J.T..  2000.  Marsh nutrient export supplied by ground water discharge: Evidence from radium measurements. Global Biogeochemical Cycles. 14:167-176.

Kirkby R., Claessens L., , Rastetter E., Vallino J..  2000.  Modeling the effects of land-use change on nitrogen biogeochemistry in the Ipswich watershed, Massachusetts. Biological Bulletin. 199:218-219.

Holmes R.M, Peterson B.J., Deegan L., Hughes J., Fry B..  2000.  Nitrogen biogeochemistry in the oligohaline zone of a New England estuary.. Ecology. 81:416-432.

Hughes J.E, Deegan L.A., Peterson B.J., Holmes R.M., Fry B..  2000.  Nitrogen flow through the food web in the oligohaline zone of a New England estuary.. Ecology. 81:433-452.

Howarth R.W., Anderson D., Cloern J., Elfring C., Hopkinson C., Lapointe B., Malone T., Marcus N., McGlathery K., Sharpley A. et al..  2000.  Nutrient pollution of coastal rivers, bays and seas. Issues in Ecology. :1-15.

Pontius, Jr. R.G..  2000.  Quantification error versus location error in comparison of categorical maps. Photogrammetric Engineering & Remote Sensing. 66:1011-1016.

Mondrup T..  2000.  Salinity effects on tolerance and adaptation of estuarine nitrifying bacteria investigated by a plug-flux method. M.S.

Deegan L.A, Hughes J.E., Rountree R.A..  2000.  Salt marsh ecosystem support of marine transient species.. Concepts and Controversies in Tidal Marsh Ecology. :333-365.

Pontius, Jr. R.G., Claessens L., Hopkinson C., Marzouk A., Rastetter E.B., Schneider L.C., Vallino J..  2000.  Scenarios of land-use change and nitrogen release in the Ipswich watershed, Massachusetts, USA. Proceedings of the 4th International Conference on Integrating Geographic Information Systems and Environmental Modeling: Problems, prospects, and Needs for Research. 

Perring A., Williams M., C. Jr. H, Rastetter E., Vallino J..  2000.  Solute dynamics in storm flow of the Ipswich River Basin: Effects of land use.. Biological Bulletin. 199:219-221.

Buchsbaum R..  2000.  A Symposium Report: Marine Monitoring in Massachusetts - Water quality monitoring and related activities at Plum Island Sound. :1.

Fisher T.R, Correll D., Costanza R., Hollibaugh J., Hopkinson C., Howarth R., Rabalais N., Richey J., Vorosmarty C., Wiegert R..  2000.  Synthesizing drainage basin inputs to coastal systems.. Estuarine Science: A Synthetic Approach to Research and Practice. :81-105.

Machas R..  1999.  Analise isotopica da cadeia alimentar da Ria Formosa: Conribuicao relitiva dos produtores primaries. M.S.

Hopkinson C.S, Giblin A.E., Tucker J., Garritt R.H..  1999.  Benthic metabolism and nutrient cycling along an estuarine salinity gradient.. Estuaries. 22:825-843.

Burgess P..  1999.  Conservation and development in conflict.. M.S.

Buchsbaum R., Cooper A., LeBlanc J..  1999.  Conserving the Plum Island Sound/Rivers Ecosystem - A research report and management plan.. 

Deegan L., Wright L.A., Hughes J., Boynton E..  1999.  Establishing the Food Web Links between Estuaries and Nearshore Fisheries of New England. :26.

Komarow S., Young T., Deegan L., Garritt R..  1999.  Influence of marsh flooding on the abundance and growth of Fundulus heteroclitus in salt marsh creeks. Biological Bulletin. 197:299-300.

Pease K.M, Claessens L., Hopkinson C., Rastetter E., Vallino J., Kilham N..  1999.  Ipswich River nutrient dynamics: Preliminary assessment of a simple nitrogen-processing model. Biological Bulletin. 197:289-290.

Menard S..  1999.  Land-use change and regional growth in the Ipswich watershed basin.. B.S.

Canfield S., Claessens L., Hopkinson C.S., Rastetter E., Vallino J..  1999.  Long-term effect of municipal water use on the water budget of the Ipswich River basin. Biological Bulletin. 197:295-297.

Vallino J., Hopkinson C.S., Garritt R., Tucker J..  1999.  A non-linear inverse technique to estimate estuarine ecosystem metabolism from whole system oxygen measurements.. Proceedings of the 3rd International Symposium on Ecohydraulics. 

Young T., Komarow S., Deegan L., Garritt R..  1999.  Population size and summer home range of the green crab, Carcinus maenus, in salt marsh tidal creeks. Biological Bulletin. 197:292-299.

Mondrup T..  1999.  Salinity effects on nitrogen dynamics in estuarine sediment investigated by a plug-flux method. Biological Bulletin. 197:287-288.

Holmes R.M, Aminot A., Kerouel R., Hooker B.A., Peterson B.J..  1999.  A simple and precise method for measuring ammonium in marine and freshwater ecosystems. Canadian Journal of Fisheries and  Aquatic Science. 56:1801-1808.

Machas R., Santos R..  1999.  Sources of organic matter in Ria Formosa revealed by stable isotope analysis. Acta Oecologica. 20:463-469.

Peterson B.J.  1999.  Stable isotopes as tracers of organic matter input and transfer in benthic food webs: A review.. Acta Oecologia. 20:479-487.

Vorosmarty C.J, Li C., Sun J., Dai Z..  1998.  Drainage basins, river systems, and anthropogenic change: the Chinese example. Asian Change in the Context of Global CHange: Impacts of Natural and Anthropogenic Changes in Asia on Global Biogeochemical Cycles. :210-244.

Vallino J.J, Hopkinson C.S..  1998.  Estimation of dispersion and characteristic mixing times in Plum Island Sound Estuary. Estuarine, Coastal and Shelf Science. 46:333-350.

Hopkinson C.S, Giblin A.E., Garritt R.H., Tucker J., Hullar M.A.J..  1998.  Influence of the benthos on growth of planktonic estuarine bacteria . Aquatic Microbial Ecology. 16:109-118.

Leahy K., Buchsbaum R..  1998.  Nonpoint source comprehensive implementation program for the Mill River sub-watersheds. :13.

Sweeney J., Deegan L., Garritt R..  1998.  Population size and site fidelity of Fundulus heteroclitus in a macrotidal saltmarsh creek. Biological Bulletin. 195:238-239.

Schmitt C., Weston N.B., Hopkinson C..  1998.  A preliminary evaluation of sedimentation rates and species distribution in Plum Island estuary, Massachusetts. Biological Bulletin. 195:232-233.