@article {8794,
	title = {Recent Acceleration of Wetland Accretion and Carbon Accumulation Along the U.S. East Coast},
	journal = {Earth{\textquoteright}s Future},
	volume = {11151},
	year = {2023},
	month = {Jan-03-2023},
	issn = {2328-4277},
	doi = {10.1029/2022EF003037},
	url = {https://agupubs.onlinelibrary.wiley.com/doi/10.1029/2022EF003037https://agupubs.onlinelibrary.wiley.com/doi/pdf/10.1029/2022EF003037},
	author = {Weston, Nathaniel B. and Rodriguez, Elise and Donnelly, Brian and Solohin, Elena and Jezycki, Kristen and Demberger, Sandra and Sutter, Lori A. and Morris, James T. and Neubauer, Scott C. and Craft, Christopher B.}
}
@article {8809,
	title = {Recovery of salt marsh vegetation after ice-rafting},
	journal = {Marine Ecology Progress Series},
	volume = {710},
	year = {2023},
	month = {Apr-05-2023},
	pages = {57 - 70},
	issn = {0171-8630},
	doi = {10.3354/meps14294},
	url = {https://www.int-res.com/abstracts/meps/v710/p57-70/https://www.int-res.com/articles/meps2023/710/m710p057.pdfhttps://www.int-res.com/articles/meps2023/710/m710p057.pdf},
	author = {Nordio, G and Fagherazzi, S}
}
@article {huang_removal_2022,
	title = {Removal of {Fecal} {Indicator} {Bacteria} by {River} {Networks}},
	journal = {Water},
	volume = {14},
	number = {4},
	year = {2022},
	month = {feb},
	pages = {617},
	abstract = {Fecal contamination is a significant source of water quality impairment globally. Aquatic ecosystems can provide an important ecosystem service of fecal contamination removal. Understanding the processes that regulate the removal of fecal contamination among river networks across flow conditions is critical. We applied a river network model, the Framework for Aquatic Modeling in the Earth System (FrAMES-Ecoli), to quantify removal of fecal indicator bacteria by river networks across flow conditions during summers in a series of New England watersheds of different characteristics. FrAMES-Ecoli simulates sources, transport, and riverine removal of Escherichia coli (E. coli). Aquatic E. coli removal was simulated in both the water column and the hyporheic zone, and is a function of hydraulic conditions, flow exchange rates with the hyporheic zone, and die-off in each compartment. We found that, at the river network scale during summers, removal by river networks can be high (19{\textendash}99\%) with variability controlled by hydrologic conditions, watershed size, and distribution of sources in the watershed. Hydrology controls much of the variability, with 68{\textendash}99\% of network scale inputs removed under base flow conditions and 19{\textendash}85\% removed during storm events. Removal by the water column alone could not explain the observed pattern in E. coli, suggesting that processes such as hyporheic removal must be considered. These results suggest that river network removal of fecal indicator bacteria should be taken into consideration in managing fecal contamination at critical downstream receiving waters.},
	issn = {2073-4441},
	doi = {10.3390/w14040617},
	url = {https://www.mdpi.com/2073-4441/14/4/617},
	author = {Huang, Tao and Wollheim, Wilfred M. and Jones, Stephen H.}
}
@article {reed_responses_2022,
	title = {Responses of Coastal Ecosystems to Climate Change: Insights from Long-Term Ecological Research},
	journal = {BioScience},
	volume = {72},
	year = {2022},
	pages = {871{\textendash}888},
	abstract = {Coastal ecosystems play a disproportionately large role in society, and climate change is altering their ecological structure and function, as well as their highly valued goods and services. In the present article, we review the results from decade-scale research on coastal ecosystems shaped by foundation species (e.g., coral reefs, kelp forests, coastal marshes, seagrass meadows, mangrove forests, barrier islands) to show how climate change is altering their ecological attributes and services. We demonstrate the value of site-based, long-term studies for quantifying the resilience of coastal systems to climate forcing, identifying thresholds that cause shifts in ecological state, and investigating the capacity of coastal ecosystems to adapt to climate change and the biological mechanisms that underlie it. We draw extensively from research conducted at coastal ecosystems studied by the US Long Term Ecological Research Network, where long-term, spatially extensive observational data are coupled with shorter-term mechanistic studies to understand the ecological consequences of climate change.},
	issn = {0006-3568},
	doi = {10.1093/biosci/biac006},
	url = {https://doi.org/10.1093/biosci/biac006},
	author = {Reed, Daniel C and Schmitt, Russell J and Burd, Adrian B and Burkepile, Deron E and Kominoski, John S and McGlathery, Karen J and Miller, Robert J and Morris, James T and Zinnert, Julie C}
}
@article {mozdzer_rapid_2021,
	title = {Rapid recovery of carbon cycle processes after the cessation of chronic nutrient enrichment},
	journal = {Science of The Total Environment},
	volume = {750},
	year = {2021},
	month = {jan},
	pages = {140927},
	issn = {00489697},
	doi = {10.1016/j.scitotenv.2020.140927},
	url = {https://linkinghub.elsevier.com/retrieve/pii/S0048969720344569},
	author = {Mozdzer, Thomas J. and Drew, Sophie E. and Caplan, Joshua S. and Weber, Paige E. and Deegan, Linda A.}
}
@article {babitch_resolving_2021,
	title = {Resolving {Estuarine} {Nitrogen} {Use} by {Phytoplankton} {Communities} {Using} a {Whole} {Ecosystem} {Tracer} {Approach}},
	journal = {Estuaries and Coasts},
	volume = {44},
	number = {7},
	year = {2021},
	month = {nov},
	pages = {1883{\textendash}1898},
	issn = {1559-2723, 1559-2731},
	doi = {10.1007/s12237-021-00905-6},
	url = {https://link.springer.com/10.1007/s12237-021-00905-6},
	author = {Babitch, Jaylyn W. and Nelson, James A. and Deegan, Linda A. and Sullivan, Hillary and Stauffer, Beth A.}
}
@article {jin_river_2021,
	title = {River body extraction from sentinel-{2A}/{B} {MSI} images based on an adaptive multi-scale region growth method},
	journal = {Remote Sensing of Environment},
	volume = {255},
	year = {2021},
	month = {mar},
	pages = {112297},
	issn = {00344257},
	doi = {10.1016/j.rse.2021.112297},
	url = {https://linkinghub.elsevier.com/retrieve/pii/S0034425721000158},
	author = {Jin, Song and Liu, Yongxue and Fagherazzi, Sergio and Mi, Huan and Qiao, Gang and Xu, Wenxuan and Sun, Chao and Liu, Yongchao and Zhao, Bingxue and Fichot, C{\'e}dric G.}
}
@inbook {giblin_role_2021,
	title = {The Role of Marshes in Coastal Nutrient Dynamics and Loss},
	booktitle = {Salt Marshes: Function, Dynamics, and Stresses},
	year = {2021},
	pages = {113{\textendash}154},
	publisher = {Cambridge University Press},
	organization = {Cambridge University Press},
	address = {Cambridge},
	abstract = {Sixty-five years ago, Teal{\textquoteright}s (1962) study showed that salt marsh primary production was greater than community respiration. To explain this result, he suggested that marshes exported excess organic matter either directly as organic matter, or as organisms, to coastal waters. This concept, that marshes were {\textquotedblleft}outwelling{\textquotedblright} material to the adjacent estuary and coastal oceans, was soon expanded to nutrients as well. However, the actual importance of the marsh in supplying organic matter and nutrients to adjacent coastal systems has been controversial and reviews debating the importance of outwelling from marshes have regularly appeared over the decades (Nixon 1980, Childers et al. 2000, Odum 2000, Valiela et al. 2000, Boynton and Nixon 2013). It has also been argued that in some cases the coastal ocean can act as a source of nutrients to the marsh and estuary ({\textquotedblleft}inwelling{\textquotedblright}).},
	isbn = {9781107186286},
	doi = {10.1017/9781316888933.007},
	url = {https://www.cambridge.org/core/books/salt-marshes/role-of-marshes-in-coastal-nutrient-dynamics-and-loss/37F846FC47337398702C4F08838F9245},
	author = {Giblin, Anne E. and Fulweiler, Robinson W. and Hopkinson, Charles S.},
	editor = {FitzGerald, Duncan M. and Hughes, Zoe J.}
}
@article {PIE450,
	title = {A review of accuracy assessment for object-based image analysis: from per-pixel to per-polygon approaches},
	journal = {Journal of Photogrammetry and Remote Sensing},
	volume = {141},
	year = {2018},
	note = {PI Plum Data},
	pages = {137-147},
	keywords = {accuracy assessment, LTER-PIE, OBIA, object-based image analysis, per-pixel, per-polygon, remote sensing},
	doi = {10.1016/j.isprsjprs.2018.04.002},
	author = {Ye, S. and Pontius, R.G., Jr. and Rakshit, R.}
}
@article {PIE480,
	title = {River network saturation concept: factors influencing the balance of biogeochemical supply and demand of river networks},
	journal = {Biogeochemistry},
	year = {2018},
	note = {PI Synthesis},
	keywords = {demand, dissolved, flow regime, fluxes, gases, inorganic nitrogen, LTER-PIE, macrosystems, modeling, removal, retention, river network, saturation, sediment, sensors, supply},
	doi = {10.1007/s10533-018-0488-0},
	author = {Wollheim, W.M. and Bernal, S. and Burns, D.A. and Czuba, J.A. and Driscoll, C.T. and Hansen, A.T. and Hensley, R.T. and Hosen, J.D. and Inamdar, S. and Kaushal, S.S. and Koenig, L.E. and Lu, Y.H. and Marzadri, A. and Raymond, P.A. and Scott, D. and Stewart, R.J. and Vidon, P.G. and Wohl, E.}
}
@phdthesis {PIE458,
	title = {The role of nitrate as an electron acceptor in microbial decomposition of salt marsh sediment organic matter and implications for carbon storage},
	volume = {PhD},
	year = {2018},
	note = {Grad},
	school = {Northeastern University},
	type = {phdthesis},
	address = {Boston, MA},
	keywords = {carbon, decomposition, inorganic nutrients, LTER-PIE, organic matter, salt marsh},
	author = {Bulseco-McKim, A.}
}
@article {PIE476,
	title = {The Role of Waves, Shelf Slope, and Sediment Characteristics on the Development of Erosional Chenier Plains},
	journal = {Geophysical Research Letters},
	volume = {45},
	year = {2018},
	note = {PI},
	pages = {8435-8444},
	keywords = {chenier plains, disturbance, LTER-PIE, mudflats, sandy strandplains, sediments, wave energy},
	doi = {10.1029/2018GL078694},
	author = {Nardin, W. and Fagherazzi, S.}
}
@mastersthesis {PIE441,
	title = {Rates and drivers of nitrogen removal by fluvial wetlands in urbanizing coastal wetlands},
	volume = {M.S.},
	year = {2017},
	note = {Grad},
	pages = {80},
	school = {University of New Hampshire},
	type = {mastersthesis},
	keywords = {coast, fluvial, inorganic nitrogen, LTER-PIE, nitrogen removal, urban, wetland},
	author = {Whitney, C.}
}
@article {PIE431,
	title = {Regulation of salt marsh mosquito populations by the 18.6-year lunar-nodal cycle},
	journal = {Ecology},
	year = {2017},
	note = {PI Coastal},
	keywords = {18.6-year lunar-nodal cycle, Aedes sollicitans, disturbance, LTER-PIE, mosquitos, salt marsh fauna},
	doi = {10.1002/ecy.1861 },
	author = {Rochlin, I. and Morris, J.T.}
}
@article {PIE440,
	title = {Rules to write mathematics to clarify metrics such as the land use dynamic degrees},
	journal = {Landscape Ecology},
	volume = {32},
	number = {12},
	year = {2017},
	note = {PI},
	pages = {2249-2260},
	keywords = {annual change percentage, China, CLUDD, disturbance, intensity analysis, land change, LTER-PIE, mathematical notation},
	doi = {10.1007/s10980-017-0584-x},
	author = {Pontius, R.G., Jr. and Huang, J. and Jiang, W. and Khallaghi, S. and Lin, Y. and Liu, J. and Quan, B. and Ye, S.}
}
@article {PIE405,
	title = {Removal of terrestrial dissolved organic carbon in aquatic ecosystems of a temperate river network},
	journal = {Geophysical Research Letters},
	volume = {42},
	year = {2015},
	note = {PI Plum Data},
	keywords = {aquatic processing, LTER-PIE, organic matter, terrestrial dissolved organic carbon},
	doi = {10.1002/2015GL064647},
	author = {Wollheim, W.M. and Stewart, R.J. and Aiken, G.R. and Butler, K.D. and Morse, N.B. and Salisbury, J.}
}
@article {PIE386,
	title = {Recommendations for using the Relative Operating Characteristic (ROC)},
	journal = {Landscape Ecology},
	volume = {29},
	number = {3},
	year = {2014},
	note = {PI Plum Data},
	pages = {367-382},
	keywords = {disturbance, GIS, land change modeling, LTER-PIE},
	doi = {10.1007/s10980-013-9984-8},
	author = {Pontius, R.G., Jr. and Parmentier, B.}
}
@article {PIE366,
	title = {The relationships among hydrodynamics, sediment distribution, and chlorophyll in a mesotidal estuary.},
	journal = {Estuarine and Coastal Shelf Science},
	volume = {144},
	year = {2014},
	note = {PI Plum Data},
	pages = {54-64},
	keywords = {disturbance, hydrodynamics, LTER-PIE, microphytobenthos, primary production, sediments, tidal flats, tides, waves},
	doi = {10.1016/j.ecss.2014.04.003},
	author = {Fagherazzi, S. and Mariotti, G. and Banks, A.T. and Morgan, E.J. and Fulweiler, R.W.}
}
@article {PIE365,
	title = {Repeated erosion of cohesive sediments with biofilms},
	journal = {Advances in Geosciences},
	volume = {39},
	year = {2014},
	note = {PI Plum Data},
	pages = {9-14},
	keywords = {biofilms, disturbance, LTER-PIE, sediment erosion, tidal flat},
	doi = {10.5194/adgeo-39-9-2014},
	author = {Valentine, K. and Mariotti, G. and Fagherazzi, S.}
}
@article {PIE310,
	title = {Response of the benthic food web to short- and long-term nutrient enrichment in saltmarsh mudflats.},
	journal = {Marine Ecological Progress Series},
	volume = {474},
	year = {2013},
	note = {PD Plum Data},
	pages = {27-41},
	keywords = {bacteria, benthic food web, benthic microalgae, disturbance, grazing rates, inorganic nutrients, LTER-PIE, meiofauna, Nassarius obsoletus, nutrient enrichment, population dynamics},
	doi = {10.3354/meps10090},
	author = {Pascal, P-Y. and Fleeger, J.W. and Boschker, H.T.S. and Mitwally, H.M. and Johnson, D.S.}
}
@article {PIE320,
	title = {The roles of large top predators in coastal ecosystems: new insights from Long-Term Ecological Research.  },
	journal = {Oceanography},
	volume = {26},
	number = {3},
	year = {2013},
	note = {PI Plum Data},
	pages = {156-167},
	keywords = {bottom-up control, competition, disturbance, LTER-PIE, population dynamics, pulse and press disturbance, top-down control},
	doi = {10.5670/oceanog.2013.59},
	author = {Rosenblatt, A. and Heithaus, M.R. and Mather, M.E. and Matich, P. and Nifong, J.C. and Ripple, W.J. and Silliman, B.R.}
}
@mastersthesis {PIE276,
	title = {Relationship between fine green vegetation and socioeconomic factors},
	volume = {MS Degree},
	year = {2011},
	note = {Grad},
	school = {Clark University},
	type = {mastersthesis},
	address = {Worcester, MA},
	keywords = {disturbance, inorganic nitrogen, lawns, LTER-PIE, socioeconomics},
	author = {Rees, D.}
}
@article {PIE273,
	title = {Research on coupled human and natural Systems (CHANS): Approach, challenges and strategies},
	journal = {Bulletin of the Ecological Society of America},
	volume = {92},
	number = {2},
	year = {2011},
	note = {PI Plum Data},
	pages = {218-228},
	keywords = {CHANS, disturbance, LTER-PIE, population dynamics},
	doi = {10.1890/0012-9623-92.2.218},
	author = {McConnell, W.J. and Millington, J.D.A. and Reo, N.J. and Alberti, M. and Asbjornsen, H. and Baker, L.A. and Brozovi{\'c}, N. and Drinkwater, L.E. and Drzyzga, S.A. and Fragoso, J. and Holland, D.S. and Jantz, C.A. and Kohler, T.A. and Maschner, H.D.G. and Monticino, M. and Podest{\'a}, G. and Pontius, R.G., Jr. and Redman, C.L. and Sailor, D. and Urquhart, G. and Liu, Jianguo}
}
@article {PIE270,
	title = {Residence time distribution in surface transient storage zones in streams: Estimation via signal deconvolution},
	journal = {Water Resources Research},
	volume = {47},
	number = {W05509},
	year = {2011},
	note = {PI Plum Data},
	pages = {7 pp},
	keywords = {disturbance, hydrology, LTER-PIE, residence time, streams},
	doi = {10.1029/2010WR009959},
	author = {Gooseff, M. and Benson, D.A. and Briggs, M.A. and Weaver, M. and Wollheim, W.M. and Peterson, B.J. and Hopkinson, C.S.}
}
@article {PIE249,
	title = {Role of origin and release location in pre-spawning movements of anadromous alewives},
	journal = {Fisheries Management and Ecology},
	volume = {18},
	number = {1},
	year = {2011},
	note = {PI Plum Data},
	pages = {12-14},
	keywords = {alosine, evaluation, LTER-PIE, native fish, restoration, stocking, telemetry, trap and transfer},
	doi = {10.1111/j.1365-2400.2010.00759.x},
	author = {Frank, H.F. and Mather, M.E. and Smith, J.M. and Muth, R.M. and Finn, J.T.}
}
@article {PIE215,
	title = {Range of categorical associations for comparison of maps with mixed pixels},
	journal = {Photogrammetric Engineering \& Remote Sensing},
	volume = {75},
	number = {8},
	year = {2009},
	note = {PI Plum Data},
	pages = {963-969},
	keywords = {disturbance, GIS, LTER-PIE},
	doi = {10.14358/PERS.75.8.963},
	author = {Pontius, R.G., Jr. and Connors, J.}
}
@article {PIE182,
	title = {The regional and global significance of reactive N removal in lakes and reservoirs},
	journal = {Biogeochemistry},
	volume = {93},
	year = {2009},
	note = {PI Synthesis},
	pages = {147-158},
	keywords = {denitrification, global limnology, inorganic nutrients, lakes, LTER-PIE, nitrogen, nitrogen removal, resevoirs},
	doi = {10.1007/s10533-008-9272-x},
	author = {Harrison, J. and Maranger, R. and Alexander, R.B. and Cornwell, J. and Giblin, A. and Jacinthe, P. and Mayorga, E. and Seitzinger, S. and Wollheim, W.M.}
}
@article {PIE214,
	title = {Relationships Between Spartina alterniflora and Littoraria irrorata in a South Carolina Salt Marsh},
	journal = {Wetlands},
	volume = {29},
	year = {2009},
	note = {Grad},
	pages = {818-825},
	keywords = {bottom-up, detritivore, herbivory, Littoraria irrorata, LTER-PIE, population dynamics, primary production, Spartina, top-down},
	doi = {10.1672/08-178.1},
	author = {Kiehn, W.M and Morris, J.T.}
}
@article {PIE165,
	title = {Relationship between river size and nutrient removal.},
	journal = {Geophysical Research Letters},
	volume = {33},
	year = {2006},
	note = {PI Plum Data},
	keywords = {hydrology, inorganic nutrients, LTER-PIE, nutrient removal},
	doi = {10.1029/2006GL025845},
	author = {Wollheim, W.M. and Vorosmarty, C.J. and Peterson, B.J. and Seitzinger, S.P. and Hopkinson, C.S.}
}
@article {PIE162,
	title = {The role of snowmelt and spring rainfall in inorganic nutrient fluxes from a large temperate watershed, the Androscoggin River basin (Maine and New Hampshire).},
	journal = {Biogeochemistry},
	volume = {80},
	year = {2006},
	note = {PI Coastal},
	pages = {217-234},
	keywords = {Androscoggin River, DIN, Freshet, LTER-PIE, nitrogen, nutrient, Snowmelt, Snowpack, watershed},
	doi = {10.1007/s10533-006-9017-7},
	author = {Oczkowski, A.J. and Pellerin, B.A. and Hunt, C.W. and Wollheim, W.M. and Vorosmarty, C.J. and Loder, T.C.}
}
@article {PIE146,
	title = {Relationships of land use and streamwater solute concentrations in the Ipswich River basin, northeastern Massachusetts.},
	journal = {Water, Air, and Soil Pollution},
	volume = {161},
	year = {2005},
	note = {PD Plum Data},
	keywords = {land cover, land use, LTER-PIE, solute concentration, urbanization, watershed},
	doi = {10.1007/s11270-005-2830-0},
	author = {Williams, M. and Hopkinson, C. and Rastetter, E. and Vallino, J. and Claussens, L.}
}
@article {PIE130,
	title = {Role of wetlands and developed land use on dissolved organic nitrogen concentrations and DON / TDN in northeastern U.S. rivers and streams},
	journal = {Limnology and Oceanography},
	volume = {49},
	year = {2004},
	note = {Grad},
	pages = {910-918},
	keywords = {dissolved organic nitrogen, land use, LTER-PIE, watershed, wetlands},
	doi = {10.4319/lo.2004.49.4.0910},
	author = {Pellerin, B.A. and Wollheim, W. and Hopkinson, C. and McDowell, W. and Williams, M. and Vorosmarty, C. and Daley, M.}
}
@article {PIE118,
	title = {Rapid screening for freshwater bacterial groups using reverse line blot hybridization},
	journal = {Applied Environmental Microbiology},
	volume = {69},
	year = {2003},
	note = {PD Plum Data},
	pages = {5875-5883},
	keywords = {bacteria, freshwater, genome, LTER-PIE},
	doi = {10.1128/AEM.69.10.5875-5883.2003},
	author = {Zwart, G. and van Hannen, E.J. and Kamst-van Agerveld, M.P. and van der Gucht, K. and Lindstrom, E.S. and Van Wichelen, J. and Lauridsen, T. and Crump, B.C. and Han, S.K. and Declerck, S.}
}
@inbook {PIE98,
	title = {The Role of Models in Addressing Coastal Eutrophication Problems},
	booktitle = {The Role of Models in Ecosystems Science},
	year = {2003},
	note = {PI Synthesis},
	pages = {327-343},
	publisher = {Princeton University Press.},
	organization = {Princeton University Press.},
	keywords = {coastal eutrophication, computer modeling, inorganic nutrients, LTER-PIE},
	author = {Giblin, A. E. and Vallino, J.},
	editor = {C.D. Canham and J.J. Cole and W.K. Lauenroth}
}
@article {PIE108,
	title = {A (r)Ray of hope in analysis of function and diversity of microbial communities},
	journal = {Biological Bulletin},
	volume = {204},
	year = {2003},
	note = {Collab Plum Data},
	pages = {196-199},
	keywords = {estuary, genome, LTER-PIE, microbial communities},
	doi = {10.2307/1543558},
	author = {Poltz, M.F. and Bertilsson, S. and Acinas, S.G. and Hunt, D.}
}
@article {PIE80,
	title = {Reconstruction of Historical Land Cover in the Ipswich Watershed.},
	journal = {Biological Bulletin},
	volume = {203},
	year = {2002},
	note = {REU},
	pages = {253-254},
	keywords = {Ipswich River, land use change, LTER-PIE, watershed},
	doi = {10.2307/1543426},
	author = {Huffaker, D. and Pontius, R.G., Jr.}
}
@article {PIE87,
	title = {Responses of coastal wetlands to rising sea level},
	journal = {Ecology},
	volume = {83},
	year = {2002},
	note = {PI Coastal},
	pages = {2869-2877},
	keywords = {coastal wetlands, LTER-PIE, model, optimal elevation, organic matter, salt marsh, sea-level rise, sediment accretion, sedimentation, Spartina},
	doi = {10.1890/0012-9658(2002)083[2869:ROCWTR]2.0.CO;2},
	author = {Morris, J. and Sundareshwar, P.V. and Nietch, C.T. and Kjerfve, B and Cahoon, D.R.}
}
@article {PIE64,
	title = {Riverine export of aged terrestrial organic matter to the North Atlantic Ocean.},
	journal = {Nature},
	volume = {409},
	year = {2001},
	note = {PD Plum Data},
	pages = {497-500},
	keywords = {dissolved organic carbon, LTER-PIE, organic matter, terrestrial, watershed},
	doi = {10.1038/35054034},
	author = {Raymond, P. A. and Bauer, J.E.}
}
