@phdthesis {PIE456,
	title = {Factors that affect the composition and activity of salt marsh microbial communities: the effect of nutrient loading and diel cycles},
	volume = {PhD},
	year = {2017},
	note = {Grad},
	school = {Northeastern University},
	type = {phdthesis},
	address = {Boston, MA},
	keywords = {bacteria, dormancy, LTER-PIE, marsh pond, microbial activity, nutrient enrichment, population dynamics, rare biosphere, salt marsh},
	author = {Kearns, P.}
}
@article {PIE420,
	title = {Nutrient enrichment induces dormancy and decreases diversity of active bacteria},
	journal = {Nature Communications},
	volume = {7},
	year = {2016},
	note = {Grad},
	keywords = {bacteria, dormancy, LTER-PIE, nutrient enrichment, population dynamics},
	doi = {10.1038/ncomms12881},
	author = {Kearns, P. and Angell, J.H. and Howard, E. and Deegan, L.A. and Stanley, R.H. and Bowen, J.L.}
}
@article {PIE310,
	title = {Response of the benthic food web to short- and long-term nutrient enrichment in saltmarsh mudflats.},
	journal = {Marine Ecological Progress Series},
	volume = {474},
	year = {2013},
	note = {PD Plum Data},
	pages = {27-41},
	keywords = {bacteria, benthic food web, benthic microalgae, disturbance, grazing rates, inorganic nutrients, LTER-PIE, meiofauna, Nassarius obsoletus, nutrient enrichment, population dynamics},
	doi = {10.3354/meps10090},
	author = {Pascal, P-Y. and Fleeger, J.W. and Boschker, H.T.S. and Mitwally, H.M. and Johnson, D.S.}
}
@article {PIE169,
	title = {Salt marsh sediment bacteria: their distribution and response to external nutrient inputs},
	journal = {The ISME Journal},
	volume = {3},
	year = {2009},
	note = {PI Plum Data},
	pages = {924 - 934},
	keywords = {bacteria, disturbance, inorganic nutrients, LTER-PIE, nitrogen, salt marsh},
	doi = {10.1038/ismej.2009.44},
	author = {Bowen, J.L. and Crump, B.C. and Deegan, L.A. and Hobbie, J.E.}
}
@article {PIE166,
	title = {Functionally distinct communities of ammonia-oxidizing bacteria along an estuarine salinity gradient},
	journal = {Environmental Microbiology},
	volume = {9},
	year = {2007},
	note = {PI Plum Data},
	pages = {1439-1447},
	keywords = {ammonia, bacteria, disturbance, LTER-PIE, population dynamics, salinity gradient},
	doi = {10.1111/j.1462-2920.2007.01260.x},
	author = {Bernhard, A.E. and Tucker, J. and Giblin, A.E. and Stahl, D.A.}
}
@article {PIE229,
	title = {Bacterial carbon sources in coastal sediments: a cross-system analysis based on stable isotope data of biomarkers},
	journal = {Biogeosciences},
	volume = {3},
	year = {2006},
	note = {Collab Plum Data},
	pages = {175-185},
	keywords = {bacteria, biomarkers, coastal sediments, LTER-PIE, organic matter, stable isotopes},
	doi = {10.5194/bg-3-175-2006},
	author = {Bouillon, S. and Boschker, H.T.S.}
}
@article {PIE148,
	title = {Loss of Diversity of Ammonia-Oxidizing Bacteria Correlates with Increasing Salinity in an Estuary System.},
	journal = {Environmental Microbiology},
	volume = {7},
	year = {2005},
	note = {PI Plum Data},
	pages = {1289-1297},
	keywords = {ammonia, bacteria, diversity, estuary, LTER-PIE},
	doi = {10.1111/j.1462-2920.2005.00808.x},
	author = {Bernhard, A. and Donn, T.M. and Giblin, A.E. and Stahl, D.A.}
}
@article {PIE147,
	title = {Molecular characterization of sulfate-reducing bacteria in a New England salt marsh.},
	journal = {Environmental Microbiology},
	volume = {7},
	year = {2005},
	note = {PI Plum Data},
	pages = {1175-1185},
	keywords = {bacteria, LTER-PIE, molecular, salt marsh, sulfate},
	doi = {10.1111/j.1462-2920.2005.00796.x},
	author = {Bahr, M. and Crump, B.C. and Klepac-Ceraj, V. and Teske, A.P. and Sogin, M.L. and Hobbie, J.E.}
}
@article {PIE119,
	title = {Fine-scale phylogenetic architecture of a complex bacterial community.},
	journal = {Nature},
	volume = {430},
	year = {2004},
	note = {Collab Plum Data},
	pages = {551-554},
	keywords = {bacteria, diversity, LTER-PIE},
	doi = {10.1038/nature02649},
	author = {Acinas, S.G. and Klepac-Ceraj, K. and Hunt, D.E. and Pharino, C. and Ceraj, C. and Distel, D.L. and Polz, M.F.}
}
@article {PIE129,
	title = {Flow Cytometry-Assisted Cloning of Specific Sequence Motifs from Complex 16S rRNA Gene Libraries},
	journal = {Applied and Environmental Microbiology},
	volume = {70},
	year = {2004},
	note = {Collab Plum Data},
	pages = {7550-7554},
	keywords = {bacteria, flow cytometry, LTER-PIE},
	doi = {10.1128/AEM.70.12.7550-7554.2004},
	author = {Nielsen, J.L. and Schramm, A. and Bernhard, A.E. and van den EnghG.J. and Stahl, D.A.}
}
@article {PIE126,
	title = {High overall diversity and dominance of microdiverse relationships in salt marsh sulfate-reducing bacteria.},
	journal = {Environmental Microbiology},
	volume = {6},
	year = {2004},
	note = {PI Plum Data},
	pages = {686-698},
	keywords = {bacteria, diversity, LTER-PIE, salt marsh, sulfur},
	doi = {10.1111/j.1462-2920.2004.00600.x},
	author = {Klepac-Ceraj, V. and Bahr, M. and Crump, B.C. and Teske, A.P. and Hobbie, J.E. and Poltz, M.F.}
}
@article {PIE121,
	title = {Microbial biogeography along an estuarine salinity gradient: the combined influences of bacterial growth and residence time.},
	journal = {Applied and Environmental Microbiology},
	volume = {70},
	year = {2004},
	note = {PI Plum Data},
	pages = {1494-1505},
	keywords = {16S rDNA, bacteria, biogeography, disturbance, estuary, LTER-PIE, population dynamics},
	doi = {10.1128/AEM.70.3.1494-1505.2004},
	author = {Crump, B.C. and Hopkinson, C.S. and Sogin, M.L. and Hobbie, J.H.}
}
@article {PIE118,
	title = {Rapid screening for freshwater bacterial groups using reverse line blot hybridization},
	journal = {Applied Environmental Microbiology},
	volume = {69},
	year = {2003},
	note = {PD Plum Data},
	pages = {5875-5883},
	keywords = {bacteria, freshwater, genome, LTER-PIE},
	doi = {10.1128/AEM.69.10.5875-5883.2003},
	author = {Zwart, G. and van Hannen, E.J. and Kamst-van Agerveld, M.P. and van der Gucht, K. and Lindstrom, E.S. and Van Wichelen, J. and Lauridsen, T. and Crump, B.C. and Han, S.K. and Declerck, S.}
}
@article {PIE91,
	title = {Typical freshwater bacteria: an analysis of available 16S rRNA gene sequences from plankton of freshwater lakes and rivers.},
	journal = {Aquatic Microbial Ecology},
	volume = {28},
	year = {2002},
	note = {PD Plum Data},
	pages = {141-155},
	keywords = {16S rRNA, bacteria, genome, lakes, LTER-PIE, population dynamics, rivers},
	doi = {10.3354/ame028141},
	author = {Zwart, G. and Crump, B.C. and Kamst-van Agterveld, M.P. and Hagen, F. and Han, S.K.}
}
@article {PIE5,
	title = {Influence of the benthos on growth of planktonic estuarine bacteria },
	journal = {Aquatic Microbial Ecology},
	volume = {16},
	year = {1998},
	note = {PI Plum Data},
	pages = {109-118},
	keywords = {bacteria, bacterial growth, dissolved organic matter, DOC, DON, estuarine sediments, LTER-PIE, organic matter},
	doi = {10.3354/ame016109},
	author = {Hopkinson, C. S. and Giblin, A.E. and Garritt, R.H. and Tucker, J. and Hullar, M.A.J.}
}
