@article {8664,
	title = {Diel light cycles affect phytoplankton competition in the global ocean},
	journal = {BioRxiv},
	volume = {2021.05.19.444874},
	year = {2021},
	type = {preprint},
	keywords = {biogeography, competition, growth rates, light cycles, LTER-PIE, nutrients, phytoplankton},
	doi = {10.1101/2021.05.19.444874 },
	author = {Tsakalakis, I. and Follows, J. and Dutkiewicz, S. and Follett, C.L and Vallino, J.J.}
}
@article {8668,
	title = {maxEntropyProd/MEP-AutoHetDet: Release of Fortran code associated with paper},
	year = {2020},
	publisher = {Zenodo},
	type = {Software},
	edition = {4.7},
	keywords = {maximum entropy production, heterotrophy, modelling},
	doi = {10.5281/zenodo.3979922},
	url = {https://github.com/maxEntropyProd/MEP-AutoHetDet},
	author = {Vallino, J.J.}
}
@article {8666,
	title = {maxEntropyProd/MEP-SidersPond: Release of Fortran code associated with published paper},
	year = {2020},
	publisher = {Zenodo},
	type = {Software},
	edition = { v1.5.9},
	keywords = {biogeochemistry, maximum entropy production, microbes, modelling, pond},
	doi = {10.5281/zenodo.3978698},
	url = {https://github.com/maxEntropyProd/MEP-SidersPond},
	author = {Vallino, J.J.}
}
@article {PIE472,
	title = {Fluid geochemistry, local hydrology, and metabolic activity define methanogen community size and composition in deep-sea hydrothermal vents},
	journal = {ISME},
	year = {2019},
	note = {PI},
	keywords = {flow path geometry, LTER-PIE, methanogens, microbial communities, population dynamics},
	doi = {10.1038/s41396-019-0382-3},
	author = {Stewart, L.C. and Algar, C.K. and Fortunato, C.S. and Larson, B.I. and Vallino, J.J. and Huber, J.A. and Butterfield, D.A. and Holden, J.F.}
}
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	title = {Using Maximum Entropy Production to Describe Microbial Biogeochemistry Over Time and Space in a Meromictic Pond},
	journal = {Frontiers in Environmental Science},
	year = {2018},
	note = {PI},
	keywords = {community function, inorganic nitrogen, LTER-PIE, maximum entropy production, meromictic, metabolic net works, microbial biogepchemustry, phototrophy},
	doi = {10.3389/fenvs.2018.00100},
	author = {Vallino, J.J. and Huber, J.A.}
}
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	volume = {8},
	year = {2016},
	note = {PI Plum Data},
	pages = {333-356},
	keywords = {biogeochemistry, entropy, LTER-PIE, maximum entropy production, MEP},
	doi = {10.1146/annurev-marine-010814-015843},
	author = {Vallino, J.J. and Algar, C.K.}
}
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	journal = {Aquatic Microbial Ecology},
	volume = {71},
	year = {2014},
	note = {PI Plum Data},
	pages = {223-238},
	keywords = {coastal sediments, estuaries, inorganic nutrients, LTER-PIE, microbes, nitrate reduction},
	doi = {10.3354/ame01678},
	author = {Algar, C.K. and Vallino, J.J.}
}
@inbook {PIE327,
	title = {Use of receding horizon optimal control to solve MaxEP-based biogeochemistry problems},
	booktitle = {Beyond the Second Law: Entropy Production and Non-Equilibrium Systems},
	year = {2014},
	note = {PI Plum Data},
	pages = {337-359},
	publisher = {Springer},
	organization = {Springer},
	keywords = {complex systems, complexity, disturbance, entropy production, inorganic nutrients, LTER-PIE, non-equilibrium systems, organic matter, population dynamics},
	doi = {10.1007/978-3-642-40154-1_18.},
	author = {Vallino, J.J. and Algar, C.K. and Fernandez Gonzales, N. and Huber, J.A.},
	editor = {Dewar, R.C. and Lineweaver, C.H. and Niven, R.K. and Regenauer-Lieb, K.}
}
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	title = {Differences and implications in biogeochemistry from maximizing entropy production locally versus globally},
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	volume = {2},
	year = {2011},
	note = {PI Plum Data},
	pages = {69-85},
	keywords = {dissipative systems, disturbance, evolution, free energy, information, inorganic nutrients, living systems, LTER-PIE, organic matter, population dynamics, self-organization},
	doi = {10.5194/esd-2-69-2011},
	author = {Vallino, J.J.}
}
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	volume = {365},
	year = {2010},
	note = {PI Plum Data},
	pages = {1417-1427},
	keywords = {disturbance, entropy, inorganic nutrients, LTER-PIE, metabolism, organic matter, population dynamics},
	doi = {10.1098/rstb.2009.0272},
	author = {Vallino, J.J.}
}
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	journal = {Biological Bulletin},
	volume = {204},
	year = {2003},
	note = {PI Plum Data},
	pages = {174-179},
	keywords = {LTER-PIE, metabolism, microbes, model},
	doi = {10.2307/1543554},
	author = {Vallino, J.J.}
}
