@article {8776,
	title = {Frequent Storm Surges Affect the Groundwater of Coastal Ecosystems},
	journal = {Geophysical Research Letters},
	volume = {501815},
	year = {2023},
	month = {Apr-01-2024},
	issn = {0094-8276},
	doi = {10.1029/2022GL100191},
	url = {https://onlinelibrary.wiley.com/doi/10.1029/2022GL100191},
	author = {Nordio, Giovanna and Frederiks, Ryan and Hingst, Mary and Carr, Joel and Kirwan, Matt and Gedan, Keryn and Michael, Holly and Fagherazzi, Sergio}
}
@article {rand_parasite_2023,
	title = {Parasite manipulation of host phenotypes inferred from transcriptional analyses in a trematode-amphipod system},
	journal = {Molecular Ecology},
	volume = {32},
	year = {2023},
	pages = {5028{\textendash}5041},
	abstract = {Manipulation of host phenotypes by parasites is hypothesized to be an adaptive strategy enhancing parasite transmission across hosts and generations. Characterizing the molecular mechanisms of manipulation is important to advance our understanding of host{\textendash}parasite coevolution. The trematode (Levinseniella byrdi) is known to alter the colour and behaviour of its amphipod host (Orchestia grillus) presumably increasing predation of amphipods which enhances trematode transmission through its life cycle. We sampled 24 infected and 24 uninfected amphipods from a salt marsh in Massachusetts to perform differential gene expression analysis. In addition, we constructed novel genomic tools for O. grillus including a de novo genome and transcriptome. We discovered that trematode infection results in upregulation of amphipod transcripts associated with pigmentation and detection of external stimuli, and downregulation of multiple amphipod transcripts implicated in invertebrate immune responses, such as vacuolar ATPase genes. We hypothesize that suppression of immune genes and the altered expression of genes associated with coloration and behaviour may allow the trematode to persist in the amphipod and engage in further biochemical manipulation that promotes transmission. The genomic tools and transcriptomic analyses reported provide new opportunities to discover how parasites alter diverse pathways underlying host phenotypic changes in natural populations.},
	keywords = {amphipod, differential expression, ecological genomics, host{\textendash}parasite co-evolution, infection response, Orchestia grillus, parasite manipulation, population genetics, trematode},
	issn = {1365-294X},
	doi = {10.1111/mec.17093},
	url = {https://onlinelibrary.wiley.com/doi/abs/10.1111/mec.17093},
	author = {Rand, David M. and Nunez, Joaquin C. B. and Williams, Shawn and Rong, Stephen and Burley, John T. and Neil, Kimberly B. and Spierer, Adam N. and McKerrow, Wilson and Johnson, David S. and Raynes, Yevgeniy and Fayton, Thomas J. and Skvir, Nicholas and Ferranti, David A. and Zeff, Maya Greenhill and Lyons, Amanda and Okami, Naima and Morgan, David M. and Kinney, Kealohanuiopuna and Brown, Bianca R. P. and Giblin, Anne E. and Cardon, Zoe G.}
}
@article {8794,
	title = {Recent Acceleration of Wetland Accretion and Carbon Accumulation Along the U.S. East Coast},
	journal = {Earth{\textquoteright}s Future},
	volume = {11151},
	year = {2023},
	month = {Jan-03-2023},
	issn = {2328-4277},
	doi = {10.1029/2022EF003037},
	url = {https://agupubs.onlinelibrary.wiley.com/doi/10.1029/2022EF003037https://agupubs.onlinelibrary.wiley.com/doi/pdf/10.1029/2022EF003037},
	author = {Weston, Nathaniel B. and Rodriguez, Elise and Donnelly, Brian and Solohin, Elena and Jezycki, Kristen and Demberger, Sandra and Sutter, Lori A. and Morris, James T. and Neubauer, Scott C. and Craft, Christopher B.}
}
@article {8809,
	title = {Recovery of salt marsh vegetation after ice-rafting},
	journal = {Marine Ecology Progress Series},
	volume = {710},
	year = {2023},
	month = {Apr-05-2023},
	pages = {57 - 70},
	issn = {0171-8630},
	doi = {10.3354/meps14294},
	url = {https://www.int-res.com/abstracts/meps/v710/p57-70/https://www.int-res.com/articles/meps2023/710/m710p057.pdfhttps://www.int-res.com/articles/meps2023/710/m710p057.pdf},
	author = {Nordio, G and Fagherazzi, S}
}
@article {johnston_spatial_2023,
	title = {Spatial dimensions of water quality value in New England river networks},
	journal = {Proceedings of the National Academy of Sciences},
	volume = {120},
	year = {2023},
	pages = {e2120255119},
	abstract = {Households{\textquoteright} willingness to pay (WTP) for water quality improvements{\textemdash}representing their economic value{\textemdash}depends on where improvements occur. Households often hold higher values for improvements close to their homes or iconic areas. Are there other areas where improvements might hold high value to individual households, do effects on WTP vary by type of improvement, and can these areas be identified even if they are not anticipated by researchers? To answer these questions, we integrated a water quality model and map-based, interactive choice experiment to estimate households{\textquoteright} WTP for water quality improvements throughout a river network covering six New England states. The choice experiment was implemented using a push-to-web survey over a sample of New England households. Voting scenarios used to elicit WTP included interactive geographic information system (GIS) maps that illustrated three water quality measures at various zoom levels across the study domain. We captured data on how respondents maneuvered through these maps prior to answering the value-eliciting questions. Results show that WTP was influenced by regionwide quality improvements and improvements surrounding each respondent{\textquoteright}s home, as anticipated, but also by improvements in individualized locations identifiable via each respondent{\textquoteright}s map interactions. These spatial WTP variations only appear for low-quality rivers and are focused around particular areas of New England. The study shows that dynamic map interactions can convey salient information for WTP estimation and that predicting spatial WTP heterogeneity based primarily on home or iconic locations, as typically done, may overlook areas where water quality has high value.},
	doi = {10.1073/pnas.2120255119},
	url = {https://www.pnas.org/doi/abs/10.1073/pnas.2120255119},
	author = {Johnston, Robert J. and Moeltner, Klaus and Peery, Seth and Ndebele, Tom and Yao, Zhenyu and Crema, Stefano and Wollheim, Wilfred M. and Besedin, Elena}
}
@inbook {fagherazzi_ecogeomorphology_2022,
	title = {Ecogeomorphology of Salt Marshes},
	booktitle = {Treatise on Geomorphology (Second Edition)},
	year = {2022},
	pages = {445 {\textendash} 462},
	publisher = {Academic Press},
	organization = {Academic Press},
	keywords = {Belowground biomass Ecogeomorphology Halophyte vegetation Nutrient enrichment Root scalping Salt marsh Sea level rise Tidal channels Tides and wind waves},
	doi = {10.1016/B978-0-12-818234-5.00194-2},
	url = {https://www.sciencedirect.com/science/article/pii/B9780128182345001942?via\%3Dihub},
	author = {Fagherazzi, S. and FitzGerald, D.M. and Fulweiler, R.W. and Hughes, Z. and Wiberg, P.L. and McGlathery, K.J. and Morris, J.T. and Tolhurst, T. J. and Deegan, L.A. and Johnson, D.S. and Lesser, J.S. and Nelson, J.A.},
	editor = {Shroder, J.F.}
}
@inbook {fagherazzi__modelling_2022,
	title = {Modelling Tidal Environments},
	booktitle = {Treatise on Geomorphology (Second Edition)},
	year = {2022},
	pages = {62{\textendash}82},
	publisher = {Academic Press},
	organization = {Academic Press},
	keywords = {Estuary Inlet Morphodynamics Numerical model Salt marsh Sediment transport Tidal channel Tidal flat Tidal landforms Tides},
	isbn = {9780128182352},
	doi = {10.1016/B978-0-12-818234-5.00097-3},
	url = {https://www.sciencedirect.com/science/article/pii/B9780128182345000973?via\%3Dihub},
	author = {Fagherazzi, S. and Leonardi, N. and Carniello, L. and Canestrelli, A. and D{\textquoteright}Alpaos, A. and Nardin, W.},
	editor = {Shroder, J.F.}
}
@article {stopak_quantifying_2022,
	title = {Quantifying the Importance of Ice-Rafted Debris to Salt Marsh Sedimentation Using High Resolution UAS Imagery},
	journal = {Remote Sensing},
	volume = {14},
	year = {2022},
	pages = {5499},
	abstract = {Salt marshes are vulnerable to sea-level rise, sediment deficits, and storm impacts. To remain vertically resilient, salt marshes must accrete sediment at rates greater or equal to sea-level rise. Ice-rafted debris (IRD), sediment that has been moved and deposited from ice sheets, is one of many processes that contribute to salt marsh sediment accretion in northern latitudes. On 4 January 2018, a winter storm caused major ice mobilization in the Plum Island Estuary (PIE), Massachusetts, USA, which led to large deposits of ice-rafted sediment. We aimed to quantify the volume and mass of deposited sediment, and evaluate the significance of IRD to sediment supply in Plum Island using pixel-based land-cover classification of aerial imagery collected by an Unmanned Aircraft System (UAS) and a Digital Elevation Model. Field measurements of patch thickness, and the area of IRD determined from the classification were used to estimate annual sediment accretion from IRD. Results show that IRD deposits are localized in three areas, and estimates show that IRD contributes an annual sediment accretion rate of 0.57 {\textpm} 0.14 mm/y to the study site. New England salt marsh accretion rates typically vary between 2{\textendash}10 mm/y, and the average PIE sediment accretion rate is 2.5{\textendash}2.7 mm/y. Therefore, this event contributed on average 20\% of the annual volume of material accreted by salt marshes, although locally the deposit thickness was 8{\textendash}14 times the annual accretion rate. We show that pixel-based classification can be a useful tool for identifying sediment deposits from remote sensing. Additionally, we suggest that IRD has the potential to bring a significant supply of sediment to salt marshes in northern latitudes and contribute to sediment accretion. As remotely sensed aerial imagery from UASs becomes more readily available, this method can be used to efficiently identify and quantify deposited sediment.},
	keywords = {pixel-based classification, salt marshes, sediment transport, storms},
	issn = {2072-4292},
	doi = {10.3390/rs14215499},
	url = {https://www.mdpi.com/2072-4292/14/21/5499},
	author = {Stopak, Sarah and Nordio, Giovanna and Fagherazzi, Sergio}
}
@article {nordio_salinity_2022,
	title = {Salinity increases with water table elevation at the boundary between salt marsh and forest},
	journal = {Journal of Hydrology},
	volume = {608},
	year = {2022},
	pages = {127576},
	abstract = {The migration of salt marshes into forests along coastal regions is nowadays well documented. Sea level rise and storms threaten coastal forests by increasing groundwater levels and salinity. Salinization is the main cause of forest conversion to salt marsh in North America. In this paper we study groundwater levels and salinity in two wells installed at the border between forest and salt marsh in the lower Delmarva peninsula, USA. The upper well is located in the regenerative forest, where recruitment is still possible, while the lower well is located in the persistent forest, where only mature trees survive. Groundwater in the upper well is fresh at the root depth, while in the lower well the mean salinity is 8 ppt. Our data suggest that rainfall has an instantaneous effect on salinity and groundwater levels, but it does not affect salinity and groundwater levels on longer periods (weeks to months). Groundwater levels and salinity reflect the hydraulic gradient toward the marsh (a proxy for outgoing water fluxes), the uphill hydraulic gradient (a proxy for incoming water fluxes) and temperature (a proxy for evapotranspiration). Salinity increases when groundwater levels are high. To explain this result, we put forward the hypothesis that a high water table favors the flux of surficial, fresh water to the marsh, and loss of freshwater by evapotranspiration. These losses are likely replenished by saltier water moving at depth.},
	issn = {0022-1694},
	doi = {10.1016/j.jhydrol.2022.127576},
	url = {https://www.sciencedirect.com/science/article/pii/S0022169422001512},
	author = {Nordio, Giovanna and Fagherazzi, Sergio}
}
@article {nordio_storm_2022,
	title = {Storm Surge and Tidal Dissipation in Deltaic Wetlands Bordering a Main Channel},
	journal = {Journal of Geophysical Research: Oceans},
	volume = {127},
	year = {2022},
	pages = {e2021JC017655},
	abstract = {Deltas are complex systems where tidal and riverine signals interact with each other. In river-dominated deltas, where river discharge is sufficiently high, tidal amplitude is attenuated and distorted. Here we use wavelet analysis to examine the water level signal in stations located in wetlands adjacent to the main river outlet in the Wax Lake system, part of the Mississippi River Delta in Louisiana, USA. We study the signal attenuation in lateral wetlands at different frequency bands, following the propagation of the water level signal from the Gulf of Mexico to the innermost stations. During high river discharge, the astronomical tide measured inside the wetlands is reduced of 90\%{\textendash}98\% in comparison to the tide in Atchafalaya Bay. Storm surge events, largely occurring at lower temporal frequencies, propagate conserving their energy once the signal enters the delta mouth. The river discharge signal, mostly present at frequencies lower than 1.59 μHz, is felt depending on river discharge conditions and the station position within the wetlands. Our results suggest that lateral wetlands in the Wax Lake system act as a low pass filter, attenuating tidal components but not the low frequency components of storm surges.},
	keywords = {Energy attenuation, storm surge, Tide, Wavelet transform analysis, wetland},
	issn = {2169-9291},
	doi = {10.1029/2021JC017655},
	url = {https://onlinelibrary.wiley.com/doi/abs/10.1029/2021JC017655},
	author = {Nordio, Giovanna and Fagherazzi, Sergio}
}
@article {mori_biodiversityproductivity_2021,
	title = {Biodiversity{\textendash}productivity relationships are key to nature-based climate solutions},
	journal = {Nature Climate Change},
	volume = {11},
	number = {6},
	year = {2021},
	month = {jun},
	pages = {543{\textendash}550},
	issn = {1758-678X, 1758-6798},
	doi = {10.1038/s41558-021-01062-1},
	url = {http://www.nature.com/articles/s41558-021-01062-1},
	author = {Mori, Akira S. and Dee, Laura E. and Gonzalez, Andrew and Ohashi, Haruka and Cowles, Jane and Wright, Alexandra J. and Loreau, Michel and Hautier, Yann and Newbold, Tim and Reich, Peter B. and Matsui, Tetsuya and Takeuchi, Wataru and Okada, Kei-ichi and Seidl, Rupert and Isbell, Forest}
}
@article {lesser_cross-habitat_2021,
	title = {Cross-habitat access modifies the {\textquoteleft}trophic relay{\textquoteright} in {New} {England} saltmarsh ecosystems},
	journal = {Food Webs},
	volume = {29},
	year = {2021},
	month = {dec},
	pages = {e00206},
	issn = {23522496},
	doi = {10.1016/j.fooweb.2021.e00206},
	url = {https://linkinghub.elsevier.com/retrieve/pii/S2352249621000197},
	author = {Lesser, Justin S. and Floyd, Olivia and Fedors, Katrina and Deegan, Linda A. and Johnson, David S. and Nelson, James A.}
}
@article {ziegler_geographic_2021,
	title = {Geographic {Variation} in {Salt} {Marsh} {Structure} and {Function} for {Nekton}: a {Guide} to {Finding} {Commonality} {Across} {Multiple} {Scales}},
	journal = {Estuaries and Coasts},
	volume = {44},
	number = {6},
	year = {2021},
	month = {sep},
	pages = {1497{\textendash}1507},
	issn = {1559-2723, 1559-2731},
	doi = {10.1007/s12237-020-00894-y},
	url = {https://link.springer.com/10.1007/s12237-020-00894-y},
	author = {Ziegler, Shelby L. and Baker, Ronald and Crosby, Sarah C. and Colombano, Denise D. and Barbeau, Myriam A. and Cebrian, Just and Connolly, Rod M. and Deegan, Linda A. and Gilby, Ben L. and Mallick, Debbrota and Martin, Charles W. and Nelson, James A. and Reinhardt, James F. and Simenstad, Charles A. and Waltham, Nathan J. and Worthington, Thomas A. and Rozas, Lawrence P.}
}
@inbook {morris_marsh_2021,
	title = {Marsh Equilibrium Theory: Implications for Responses to Rising Sea Level},
	booktitle = {Salt Marshes: Function, Dynamics, and Stresses},
	year = {2021},
	pages = {157{\textendash}177},
	publisher = {Cambridge University Press},
	organization = {Cambridge University Press},
	address = {Cambridge},
	abstract = {The analysis presented here was motivated by an objective of describing the interactions between the physical and biological processes governing the responses of tidal wetlands to rising sea level and the ensuing equilibrium elevation. We define equilibrium here as meaning that the elevation of the vegetated surface relative to mean sea level (MSL) remains within the vertical range of tolerance of the vegetation on decadal time scales or longer. The equilibrium is dynamic, and constantly responding to short-term changes in hydrodynamics, sediment supply, and primary productivity. For equilibrium to occur, the magnitude of vertical accretion must be great enough to compensate for change in the rate of sea-level rise (SLR). SLR is defined here as meaning the local rate relative to a benchmark, typically a gauge. Equilibrium is not a given, and SLR can exceed the capacity of a wetland to accrete vertically.},
	isbn = {9781107186286},
	doi = {10.1017/9781316888933.009},
	url = {https://www.cambridge.org/core/books/salt-marshes/marsh-equilibrium-theory/DA7B5EFE9C8CE403EF2190CC60D968EF},
	author = {Morris, James T. and Cahoon, Donald R. and Callaway, John C. and Craft, Christopher and Neubauer, Scott C. and Weston, Nathaniel B.},
	editor = {FitzGerald, Duncan M. and Hughes, Zoe J.}
}
@article {babitch_resolving_2021,
	title = {Resolving {Estuarine} {Nitrogen} {Use} by {Phytoplankton} {Communities} {Using} a {Whole} {Ecosystem} {Tracer} {Approach}},
	journal = {Estuaries and Coasts},
	volume = {44},
	number = {7},
	year = {2021},
	month = {nov},
	pages = {1883{\textendash}1898},
	issn = {1559-2723, 1559-2731},
	doi = {10.1007/s12237-021-00905-6},
	url = {https://link.springer.com/10.1007/s12237-021-00905-6},
	author = {Babitch, Jaylyn W. and Nelson, James A. and Deegan, Linda A. and Sullivan, Hillary and Stauffer, Beth A.}
}
@article {waltham_tidal_2021,
	title = {Tidal {Marsh} {Restoration} {Optimism} in a {Changing} {Climate} and {Urbanizing} {Seascape}},
	journal = {Estuaries and Coasts},
	volume = {44},
	number = {6},
	year = {2021},
	month = {sep},
	pages = {1681{\textendash}1690},
	issn = {1559-2723, 1559-2731},
	doi = {10.1007/s12237-020-00875-1},
	url = {https://link.springer.com/10.1007/s12237-020-00875-1},
	author = {Waltham, Nathan J. and Alcott, Caitlin and Barbeau, Myriam A. and Cebrian, Just and Connolly, Rod M. and Deegan, Linda A. and Dodds, Kate and Goodridge Gaines, Lucy A. and Gilby, Ben L. and Henderson, Christopher J. and McLuckie, Catherine M. and Minello, Thomas J. and Norris, Gregory S. and Ollerhead, Jeff and Pahl, James and Reinhardt, James F. and Rezek, Ryan J. and Simenstad, Charles A. and Smith, Joseph A. M. and Sparks, Eric L. and Staver, Lorie W. and Ziegler, Shelby L. and Weinstein, Michael P.}
}
@inbook {fagherazzi_understanding_2021,
	title = {Understanding Marsh Dynamics: Modeling Approaches},
	booktitle = {Salt Marshes: Function, Dynamics, and Stresses},
	year = {2021},
	pages = {278{\textendash}299},
	publisher = {Cambridge University Press},
	organization = {Cambridge University Press},
	address = {Cambridge},
	abstract = {Salt marshes have received considerable scientific attention in recent years due to a combination of factors. Salt marshes host important ecosystems and store large quantities of carbon in their soils (Fagherazzi et al. 2004; Mudd et al. 2009). Currently salt marshes are endangered by accelerated sea-level rise triggered by global warming (Kirwan et al. 2010). A sharp reduction in sediment supply caused by the damming of rivers is also jeopardizing marsh survival along many coasts (Weston 2014). As a result, there is a need to determine the fate of marshlands in different settings in order to inform government and local communities and implement protection strategies. To this end, numerical models are playing an increasingly important role, because they can easily provide future scenarios of marsh conditions under different forcings. However, the evolution of salt marshes as a function of sea-level rise and sediment supply is relatively complex, because of feedbacks among hydrodynamics, sediment transport, and vegetation (Fagherazzi et al. 2012). As a result, marshes are continuously adjusting to a changing environment, in ways often difficult to predict. This intrinsic complexity has generated a flurry of numerical models, each emphasizing a different aspect of salt marsh evolution. It is thus becoming more and more accepted by the scientific community that a comprehensive model of salt marsh evolution is not feasible, given the number and variety of physical and biological processes at play. A detailed approach, based on the description of all possible processes acting at different spatial and temporal scales, has been slowly replaced by a more practical approach, in which separate models are built to address key important processes or to capture specific dynamics.},
	isbn = {9781107186286},
	doi = {10.1017/9781316888933.013},
	url = {https://www.cambridge.org/core/books/salt-marshes/understanding-marsh-dynamics/A73B50F7C44E8E7029F450916ECDB72B},
	author = {Fagherazzi, Sergio and Kearney, William and Mariotti, Giulio and Leonardi, Nicoletta and Nardin, William},
	editor = {FitzGerald, Duncan M. and Hughes, Zoe J.}
}
@article {PIE487,
	title = {Determining the drivers of suspended sediment dynamics in tidal marsh-influenced estuaries using high-resolution ocean color remote sensing},
	journal = {Remote Sensing of Environment},
	volume = {240},
	year = {2020},
	note = {PI},
	keywords = {LTER-PIE, remote-sensing reflectance, river discharge, salt marsh, sediment budget, suspended sediment concentration, tidal asymmetry},
	doi = {10.1016/j.rse.2020.111682},
	author = {Zhang, X. and Fichot, C.G. and Baracco, C. and Guo, R. and Neugebauer, S. and Bengtsson, Z. and Ganju, N.K. and Fagherazzi, S.}
}
@article {xie_enhanced_2020,
	title = {Enhanced {Intensity} {Analysis} to {Quantify} {Categorical} {Change} and to {Identify} {Suspicious} {Land} {Transitions}: {A} {Case} {Study} of {Nanchang}, {China}},
	journal = {Remote Sensing},
	volume = {12},
	number = {20},
	year = {2020},
	pages = {3323},
	abstract = {Conventional methods to analyze a transition matrix do not offer in-depth signals concerning land changes. The land change community needs an effective approach to visualize both the size and intensity of land transitions while considering possible map errors. We propose a framework that integrates error analysis, intensity analysis, and difference components, and then uses the framework to analyze land change in Nanchang, the capital city of Jiangxi province, China. We used remotely sensed data for six categories at four time points: 1989, 2000, 2008, and 2016. We had a confusion matrix for only 2016, which estimated that the map of 2016 had a 12\% error, while the temporal difference during 2008{\textendash}2016 was 22\% of the spatial extent. Our tools revealed suspected errors at other years by analyzing the patterns of temporal difference. For example, the largest component of temporal difference was exchange, which could indicate map errors. Our framework identified categories that gained during one time interval then lost during the subsequent time interval, which raised the suspicion of map error. This proposed framework facilitated visualization of the size and intensity of land transitions while illustrating possible map errors that the profession routinely ignores.},
	issn = {2072-4292},
	doi = {10.3390/rs12203323},
	url = {https://www.mdpi.com/2072-4292/12/20/3323},
	author = {Xie, Zheyu and Pontius Jr, Robert Gilmore and Huang, Jinliang and Nitivattananon, Vilas}
}
@article {sills_fisheries_2020,
	title = {Fisheries rely on threatened salt marshes},
	journal = {Science},
	volume = {370},
	number = {6517},
	year = {2020},
	month = {nov},
	pages = {670{\textendash}671},
	issn = {0036-8075, 1095-9203},
	doi = {10.1126/science.abe9332},
	url = {https://www.science.org/doi/10.1126/science.abe9332},
	author = {Baker, Ronald and Taylor, Matthew D. and Able, Kenneth W. and Beck, Michael W. and Cebrian, Just and Colombano, Denise D. and Connolly, Rod M. and Currin, Carolyn and Deegan, Linda A. and Feller, Ilka C. and Gilby, Ben L. and Kimball, Matthew E. and Minello, Thomas J. and Rozas, Lawrence P. and Simenstad, Charles and Turner, R. Eugene and Waltham, Nathan J. and Weinstein, Michael P. and Ziegler, Shelby L. and zu Ermgassen, Philine S.E. and Alcott, Caitlin and Alford, Scott B. and Barbeau, Myriam A. and Crosby, Sarah C. and Dodds, Kate and Frank, Alyssa and Goeke, Janelle and Goodridge Gaines, Lucy A. and Hardcastle, Felicity E. and Henderson, Christopher J. and James, W. Ryan and Kenworthy, Matthew D. and Lesser, Justin and Mallick, Debbrota and Martin, Charles W. and McDonald, Ashley E. and McLuckie, Catherine and Morrison, Blair H. and Nelson, James A. and Norris, Gregory S. and Ollerhead, Jeff and Pahl, James W. and Ramsden, Sarah and Rehage, Jennifer S. and Reinhardt, James F. and Rezek, Ryan J. and Risse, L. Mark and Smith, Joseph A.M. and Sparks, Eric L. and Staver, Lorie W.},
	editor = {Sills, Jennifer}
}
@article {lesser_habitat_2020,
	title = {Habitat decoupling via saltmarsh creek geomorphology alters connection between spatially-coupled food webs},
	journal = {Estuarine, Coastal and Shelf Science},
	volume = {241},
	year = {2020},
	pages = {106825},
	issn = {02727714},
	doi = {10.1016/j.ecss.2020.106825},
	url = {https://linkinghub.elsevier.com/retrieve/pii/S0272771420300895},
	author = {Lesser, Justin S. and Bechtold, Cameron A. and Deegan, Linda A. and Nelson, James A.}
}
@article {bowen_not_2020,
	title = {Not {All} {Nitrogen} {Is} {Created} {Equal}: {Differential} {Effects} of {Nitrate} and {Ammonium} {Enrichment} in {Coastal} {Wetlands}},
	journal = {BioScience},
	volume = {70},
	number = {12},
	year = {2020},
	month = {dec},
	pages = {1108{\textendash}1119},
	abstract = {Abstract Excess reactive nitrogen (N) flows from agricultural, suburban, and urban systems to coasts, where it causes eutrophication. Coastal wetlands take up some of this N, thereby ameliorating the impacts on nearshore waters. Although the consequences of N on coastal wetlands have been extensively studied, the effect of the specific form of N is not often considered. Both oxidized N forms (nitrate, NO3-) and reduced forms (ammonium, NH4+) can relieve nutrient limitation and increase primary production. However, unlike NH4+, NO3- can also be used as an electron acceptor for microbial respiration. We present results demonstrating that, in salt marshes, microbes use NO3- to support organic matter decomposition and primary production is less stimulated than when enriched with reduced N. Understanding how different forms of N mediate the balance between primary production and decomposition is essential for managing coastal wetlands as N enrichment and sea level rise continue to assail our coasts.},
	issn = {0006-3568, 1525-3244},
	doi = {10.1093/biosci/biaa140},
	url = {https://academic.oup.com/bioscience/article/70/12/1108/6025501},
	author = {Bowen, Jennifer L and Giblin, Anne E and Murphy, Anna E and Bulseco, Ashley N and Deegan, Linda A and Johnson, David S and Nelson, James A and Mozdzer, Thomas J and Sullivan, Hillary L}
}
@article {fagherazzi_salt_2020,
	title = {Salt {Marsh} {Dynamics} in a {Period} of {Accelerated} {Sea} {Level} {Rise}},
	journal = {Journal of Geophysical Research: Earth Surface},
	volume = {125},
	number = {8},
	year = {2020},
	month = {aug},
	issn = {2169-9003, 2169-9011},
	doi = {10.1029/2019JF005200},
	url = {https://onlinelibrary.wiley.com/doi/10.1029/2019JF005200},
	author = {Fagherazzi, Sergio and Mariotti, Giulio and Leonardi, Nicoletta and Canestrelli, Alberto and Nardin, William and Kearney, William S.}
}
@article {PIE488,
	title = {Tidal Wetland Gross Primary Production Across the Continental United States, 2000{\textendash}2019.},
	journal = {Global Biogeochemical Cycles},
	volume = {34},
	year = {2020},
	note = {PI},
	keywords = {blue carbon, eddy covariance, LTER-PIE, organic matter, primary production, tidal wetlands},
	doi = {10.1029/2019GB006349},
	author = {Feagin, A. and Forbrich, I. and Huff, T.P. and Barr, J. G. and Ruiz-Plancarte, J. and Fuentes, J. D. and NaJJar, R. G. and Vargas, R. and V{\'a}zquez-Lule, A. and Windham-Myers. L. and Kroeger, K. D. and Ward, E. J. and Moore, G. W. and Leclerc, M. and Krauss, K. W. and Stagg, C. L. and Alber, M. and Knox, S. H. and Sch{\"a}fer, K.V.R. and Bianchi, T. S. and Hutchings, J. A. and Nahrawi, H. and Noormets, A. and Mitra, B. and Jaimes, A. and Hinson, A. L. and Bergamaschi, B. and King, J. S. and Miao, G.}
}
@article {lesser_trophic_2020,
	title = {Trophic niche size and overlap decreases with increasing ecosystem productivity},
	journal = {Oikos},
	volume = {129},
	number = {9},
	year = {2020},
	month = {sep},
	pages = {1303{\textendash}1313},
	issn = {0030-1299, 1600-0706},
	doi = {10.1111/oik.07026},
	url = {https://onlinelibrary.wiley.com/doi/10.1111/oik.07026},
	author = {Lesser, Justin S. and James, W. Ryan and Stallings, Christopher D. and Wilson, Rachel M. and Nelson, James A.}
}
@article {nelson_feedbacks_2019,
	title = {Feedbacks {Between} {Nutrient} {Enrichment} and {Geomorphology} {Alter} {Bottom}-{Up} {Control} on {Food} {Webs}},
	journal = {Ecosystems},
	volume = {22},
	number = {2},
	year = {2019},
	month = {mar},
	pages = {229{\textendash}242},
	issn = {1432-9840, 1435-0629},
	doi = {10.1007/s10021-018-0265-x},
	url = {http://link.springer.com/10.1007/s10021-018-0265-x},
	author = {Nelson, James A. and Johnson, David Samuel and Deegan, Linda A. and Spivak, Amanda C. and Sommer, Nathalie R.}
}
@article {PIE500,
	title = {The fiddler crab, Minuca pugnax, follows Bergmann{\textquoteright}s rule.},
	journal = {Ecology and Evolution},
	volume = {9},
	year = {2019},
	note = {PI Plum Data},
	pages = {14489-14497},
	keywords = {Bergmann{\textquoteright}s rule, fiddler crab, Gulf of Maine, LTER-PIE, population dynamics, salt marsh, temperature-size rule, tropicalization},
	doi = {10.1002/ece3.5883},
	author = {Johnson, D.S. and Crowley, C. and Longmire, K. and Nelson, J.A. and Williams, B. and Wittyngham, S.}
}
@article {johnson_fiddler_2019,
	title = {The fiddler crab, Minuca pugnax, follows Bergmann{\textquoteright}s rule},
	journal = {Ecology and Evolution},
	volume = {9},
	year = {2019},
	pages = {14489{\textendash}14497},
	abstract = {Bergmann{\textquoteright}s rule predicts that organisms at higher latitudes are larger than ones at lower latitudes. Here, we examine the body size pattern of the Atlantic marsh fiddler crab, Minuca pugnax (formerly Uca pugnax), from salt marshes on the east coast of the United States across 12 degrees of latitude. We found that M. pugnax followed Bergmann{\textquoteright}s rule and that, on average, crab carapace width increased by 0.5 mm per degree of latitude. Minuca pugnax body size also followed the temperature{\textendash}size rule with body size inversely related to mean water temperature. Because an organism{\textquoteright}s size influences its impact on an ecosystem, and M. pugnax is an ecosystem engineer that affects marsh functioning, the larger crabs at higher latitudes may have greater per-capita impacts on salt marshes than the smaller crabs at lower latitudes.},
	keywords = {Bergmann{\textquoteright}s rule, fiddler crab, Gulf of Maine, salt marsh, temperature{\textendash}size rule, tropicalization},
	issn = {2045-7758},
	doi = {10.1002/ece3.5883},
	url = {https://onlinelibrary.wiley.com/doi/abs/10.1002/ece3.5883},
	author = {Johnson, David Samuel and Crowley, Cynthia and Longmire, Katherine and Nelson, James and Williams, Bethany and Wittyngham, Serina}
}
@article {bortolus_supporting_2019,
	title = {Supporting \textit{{Spartina}} : {Interdisciplinary} perspective shows \textit{{Spartina}} as a distinct solid genus},
	journal = {Ecology},
	volume = {100},
	number = {11},
	year = {2019},
	issn = {0012-9658, 1939-9170},
	doi = {10.1002/ecy.2863},
	url = {https://onlinelibrary.wiley.com/doi/10.1002/ecy.2863},
	author = {Bortolus, Alejandro and Adam, Paul and Adams, Janine B. and Ainouche, Malika L. and Ayres, Debra and Bertness, Mark D. and Bouma, Tjeerd J. and Bruno, John F. and Ca{\c c}ador, Isabel and Carlton, James T. and Castillo, Jesus M. and Costa, Cesar S. B. and Davy, Anthony J. and Deegan, Linda and Duarte, Bernardo and Figueroa, Enrique and Gerwein, Joel and Gray, Alan J. and Grosholz, Edwin D. and Hacker, Sally D. and Hughes, A. Randall and Mateos-Naranjo, Enrique and Mendelssohn, Irving A. and Morris, James T. and Mu{\~n}oz-Rodr{\'\i}guez, Adolfo F. and Nieva, Francisco J. J. and Levin, Lisa A. and Li, Bo and Liu, Wenwen and Pennings, Steven C. and Pickart, Andrea and Redondo-G{\'o}mez, Susana and Richardson, David M. and Salmon, Armel and Schwindt, Evangelina and Silliman, Brian R. and Sotka, Erik E. and Stace, Clive and Sytsma, Mark and Temmerman, Stijn and Turner, R. Eugene and Valiela, Ivan and Weinstein, Michael P. and Weis, Judith S.}
}
@article {PIE490,
	title = {Variations in persistence and regenerative zones in coastal forests triggered by sea level rise and storms.},
	journal = {Remote Sensing},
	volume = {11},
	year = {2019},
	note = {PI},
	keywords = {coastal forest, disturbance, ecological ratchet, hurricanes, LTER-PIE, NDVI, NDWI, persistence niche, regenerative niche, salt marsh expansion, sea level rise, storm surges},
	doi = {10.3390/rs11172019},
	author = {Fagherazzi, S. and Nordio, G. and Munz, K. and Catucci, D. and Kearney, W.S.}
}
@article {langley_ambient_2018,
	title = {Ambient changes exceed treatment effects on plant species abundance in global change experiments},
	journal = {Global Change Biology},
	volume = {24},
	number = {12},
	year = {2018},
	month = {dec},
	pages = {5668{\textendash}5679},
	issn = {1354-1013, 1365-2486},
	doi = {10.1111/gcb.14442},
	url = {https://onlinelibrary.wiley.com/doi/10.1111/gcb.14442},
	author = {Langley, J. Adam and Chapman, Samantha K. and La Pierre, Kimberly J. and Avolio, Meghan and Bowman, William D. and Johnson, David S. and Isbell, Forest and Wilcox, Kevin R. and Foster, Bryan L. and Hovenden, Mark J. and Knapp, Alan K. and Koerner, Sally E. and Lortie, Christopher J. and Megonigal, James P. and Newton, Paul C. D. and Reich, Peter B. and Smith, Melinda D. and Suttle, Kenwyn B. and Tilman, David}
}
@article {PIE448,
	title = {Feedbacks Between Nutrient Enrichment and Geomorphology Alter Bottom-Up Control on Food Webs},
	journal = {Ecosystems},
	year = {2018},
	note = {PI Plum Data},
	keywords = {estuary, food web theory, geomorphology, inorganic nutrients, landscape control, LTER-PIE, nutrient enrichment, population dynamics, saltmarsh, spatially coupled, trophic subsidy},
	doi = {10.1007/s10021-018-0265-x},
	author = {Nelson, J.A. and Johnson, D.S. and Deegan, L.A. and Spivak, A.C. and Sommer, N.R.}
}
@article {PIE476,
	title = {The Role of Waves, Shelf Slope, and Sediment Characteristics on the Development of Erosional Chenier Plains},
	journal = {Geophysical Research Letters},
	volume = {45},
	year = {2018},
	note = {PI},
	pages = {8435-8444},
	keywords = {chenier plains, disturbance, LTER-PIE, mudflats, sandy strandplains, sediments, wave energy},
	doi = {10.1029/2018GL078694},
	author = {Nardin, W. and Fagherazzi, S.}
}
@article {PIE477,
	title = {Tradeoffs among hydrodynamics, sedimentfluxes and vegetationcommunity in the Virginia Coast Reserve, USA},
	journal = {Estuarine and Coastal Shelf Science},
	volume = {210},
	year = {2018},
	note = {PI},
	pages = {98-108},
	keywords = {emergent vegetation, LTER-PIE, sediment fluxes, stability, submerged vegetation},
	doi = {10.1016/j.ecss.2018.06.009},
	author = {Nardin, W. and Larsen, L. and Fagherazzi, S. and Wiberg, P.}
}
@article {PIE421,
	title = {Contributions of organic and inorganic matter to sediment volume and accretion in tidal wetlands at steady state},
	journal = {Earth{\textquoteright}s Future},
	volume = {4},
	year = {2016},
	note = {PI Plum Data},
	pages = {110-121},
	keywords = {accretion, LTER-PIE, organic matter, primary production, sea level, wetlands},
	doi = {10.1002/2015EF000334},
	author = {Morris, J.T. and Barber,  D.C. and Callaway, J.C. and Chambers, R. and Hagen, S.C. and Hopkinson, C.S. and Johnson, B.J. and Megonigal, P. and Neubauer, S.C. and Troxler, T. and Wigand, C.}
}
@article {PIE422,
	title = {Microbial associations with macrobiota in coastal ecosystems: patterns and implications for nitrogen cycling},
	journal = {Frontiers in Ecology and the Environment},
	volume = {14},
	year = {2016},
	note = {PI Synthesis},
	pages = {200-208},
	keywords = {coastal ecosystems, inorganic nitrogen, LTER-PIE, macrobiota, microbes, population dynamics},
	doi = {10.1002/fee.1262},
	author = {Moulton, O.M. and Altabet, M.A. and Beman, J.M. and Deegan, L.A. and Lloret, J. and Lyons, M.K. and Nelson, J.A. and Pfister, C.A.}
}
@article {PIE409,
	title = {Quantifying striped bass (Morone saxatilis) dependence on saltmarsh-derived productivity using stable isotope analysis},
	journal = {Estuaries and Coasts},
	year = {2016},
	note = {Undergrad},
	keywords = {estuaries, food web, LTER-PIE, Morone saxatilis, population dynamics, saltmarsh, stable isotopes, striped bass},
	doi = {10.1007/s12237-016-0092-2},
	author = {Baker, H.K. and Nelson, James and Leslie, H.M.}
}
@article {PIE410,
	title = {Satisfaction, water and fertilizer use in the American residential macrosystem},
	journal = {Environmental Research Letters},
	year = {2016},
	note = {PI Plum Data},
	keywords = {environmental satisfaction, inorganic nutrients, lawns, LTER-PIE, nitrogen, residential land use, urban ecology, water},
	doi = {10.1088/1748-9326/11/3/034004},
	author = {Groffman, P.M. and Grove, J.M. and Polsky, C. and Bettez, N.D. and Morse, J.L. and Cavender-Bares, J. and Hall, S.J. and Heffernan, J.B. and Hobbie, S.E. and Larson, K.L. and Neill, C. and Nelson, K. and Ogden, L. and O{\textquoteright}Neil-Dunne, J. and Pataki, D. and Chowdhury, R.R.}
}
@article {PIE394,
	title = {Drivers of spatial and temporal variability in estuarine food webs},
	journal = {Marine Ecological Progress Series},
	volume = {533},
	year = {2015},
	note = {PI Plum Data},
	pages = {67-77},
	keywords = {estuarine, food webs, long-term, LTER-PIE, organic matter, population dynamics, primary production, stable isotopes},
	doi = {10.3354/meps11389},
	author = {Nelson, J.A. and Deegan,L. and Garritt, R.H.}
}
@article {PIE396,
	title = {Ecosystem service preferences and priorities for residential landscapes: Homogeneity and heterogeneity across diverse cities. },
	journal = {Urban Ecosystems},
	year = {2015},
	note = {PI Plum Data},
	keywords = {ecosystem services, human values, land management, lawns, LTER-PIE, residential landscapes, urban sustainability},
	doi = {10.1007/s11252-015-0477},
	author = {Larson, K.L. and Nelson, K.C. and Samples, S.R. and Hall, S.J. and Bettez, N.D. and Cavender-Bares, J. and Groffman, P.M. and Grove, M. and Heffernan, J.B. and Hobbie, S. and Learned, J. and Morse, J.L. and Neill, C. and Ogden,L.A. and O{\textquoteright}Neil-Dunne, J. and Pataki, D.E. and Polsky, C. and Chowdhury, R.R. and Steele, M. and Trammell, T.L.E.}
}
@article {PIE408,
	title = {Increased nitrogen export from eastern North America to the Atlantic Ocean due to climatic and anthropogenic changes during 1901{\textendash}2008},
	journal = {Journal of Geophysical Research: Biogeosciences},
	volume = {120},
	year = {2015},
	note = {PI Synthesis},
	pages = {1046-1068},
	keywords = {disturbance, inorganic nutrients, LTER-PIE, nitrogen export, rivers},
	doi = {10.1002/2014JG002763},
	author = {Yang, Q. and Tian, H. and Friedrichs, M.A.M. and Hopkinson, C.S. and Lu, C. and Najjar, R.G.}
}
@article {PIE360,
	title = {Assessing the homogenization of urban land management with an application to US residential lawn care.},
	journal = {Proceedings of the National Academy of Sciences},
	volume = {111},
	year = {2014},
	note = {PI Plum Data},
	pages = {4432-4437},
	keywords = {disturbance, land-change science, LTER-PIE, private land management, sustainability science, urban ecology},
	doi = {10.1073/pnas.1323995111},
	author = {Polsky, C. and Grove, J.M. and Knudson, C. and Groffman, P.M. and Bettez, N.D. and Canvender-Bares, J. and Hall, S.J. and Heffernan, J.B. and Hobbie, S.E. and Larson, K.L. and Morse, J.L. and Neill, C. and Nelson, K.C. and Ogden, L.A. and O{\textquoteright}Neil-Dunne, J. and Pataki,D.E. and Roy Chowdury, R. and Steele, M.}
}
@article {PIE361,
	title = {Convergent Surface Water Distributions in U.S. Cities},
	journal = {Ecosystems},
	year = {2014},
	note = {PI Plum Data},
	keywords = {cities, convergence, disturbance, hydrography, LTER-PIE, surface water, urban streams, urban water bodies, urbanization},
	doi = {10.1007/s10021-014-9751-y},
	author = {Steele, M.K. and Heffernan, J.B. and Bettez, N.D. and Cavender-Bares, J. and Groffman, P.M. and Grove, J.M. and Hall, S. and Hobbie, S.E. and Larson, K. and Morse, J.L. and Neill, C. and Nelson, K.C. and O{\textquoteright}Neil-Dunne, J. and Ogden, L and Pataki, D.E. and Polsky, C. and Roy Chowdury, R.}
}
@article {PIE347,
	title = {Ecological Homogenization of Urban America},
	journal = {Frontiers in Ecology and Environment},
	year = {2014},
	note = {PI Synthesis},
	pages = {74-81},
	keywords = {LTER-PIE, plant communities, population dynamics, urbanization},
	doi = {10.1890/120374},
	author = {Groffman, P.M. and Cavender-Bares, J. and Bettez, N.D. and Grove, J.M. and Hall, S.J. and Heffernan, J.B. and Hobbie. S.E. and Larson, K.L. and Morse, J.L. and Neill, C. and Nelson, K. and O{\textquoteright}Neill-Dunne, J. and Ogden, L. and Pataki, D.E. and Polsky, C. and Chowdhury, R.R. and Steele, M.K.}
}
@inbook {PIE327,
	title = {Use of receding horizon optimal control to solve MaxEP-based biogeochemistry problems},
	booktitle = {Beyond the Second Law: Entropy Production and Non-Equilibrium Systems},
	year = {2014},
	note = {PI Plum Data},
	pages = {337-359},
	publisher = {Springer},
	organization = {Springer},
	keywords = {complex systems, complexity, disturbance, entropy production, inorganic nutrients, LTER-PIE, non-equilibrium systems, organic matter, population dynamics},
	doi = {10.1007/978-3-642-40154-1_18.},
	author = {Vallino, J.J. and Algar, C.K. and Fernandez Gonzales, N. and Huber, J.A.},
	editor = {Dewar, R.C. and Lineweaver, C.H. and Niven, R.K. and Regenauer-Lieb, K.}
}
@article {PIE340,
	title = {Brinson Review: Perspectives on the influence of nutrients on the sustainability of coastal wetlands},
	journal = {Wetlands},
	volume = {33},
	year = {2013},
	note = {PI Plum Data},
	pages = {975-988},
	keywords = {inorganic nutrients, LTER-PIE, primary production, salt marsh, wetland sustainability},
	doi = {10.1007/s13157-013-0480-3},
	author = {Morris, J.T. and Shaffer, J.A. and Nynam, J.A.}
}
@inbook {PIE326,
	title = {Future Suburban Development and the Environmental Implications of Lawns: A Case Study in New England, USA},
	booktitle = {Modeling of Land-use and Ecological Dynamics},
	series = {Cities and Nature},
	year = {2013},
	note = {PI Plum Data},
	pages = {119-141},
	publisher = {Springer},
	organization = {Springer},
	address = {New York, NY},
	keywords = {disturbance, geomod, lawns, LTER-PIE, Plum Island Ecosystem, primary production, suburbanization, water use},
	doi = {10.1007/978-3-642-40199-2_7},
	author = {Runfola, D.M. and Polsky, C. and Giner, N. and Pontius, R.G., Jr. and Nicolson, C.},
	editor = {Czamanski, D. and Benenson, I. and Malkinson, D.}
}
@article {PIE321,
	title = {A growing concern? Examining the influence of lawn size on residential water use in suburban Boston, MA, USA},
	journal = {Landscape and Urban Planning},
	volume = {119},
	year = {2013},
	note = {PI Plum Data},
	pages = {113-123},
	keywords = {disturbance, geomod, lawns, LTER-PIE, Plum Island Ecosystem, primary production, suburbanization, water use},
	doi = {10.1016/j.landurbplan.2013.07.006},
	author = {Runfola, D.M. and Polsky, C. and Nicolson, C. and Giner, N.M. and Pontius, R.G., Jr. and Krahe, J. and Decatur, A}
}
@article {PIE320,
	title = {The roles of large top predators in coastal ecosystems: new insights from Long-Term Ecological Research.  },
	journal = {Oceanography},
	volume = {26},
	number = {3},
	year = {2013},
	note = {PI Plum Data},
	pages = {156-167},
	keywords = {bottom-up control, competition, disturbance, LTER-PIE, population dynamics, pulse and press disturbance, top-down control},
	doi = {10.5670/oceanog.2013.59},
	author = {Rosenblatt, A. and Heithaus, M.R. and Mather, M.E. and Matich, P. and Nifong, J.C. and Ripple, W.J. and Silliman, B.R.}
}
@article {PIE289,
	title = {Beyond {\textquoteright}Lawn People{\textquoteright}: The role of emotions in suburban yard management practices},
	journal = {The Professional Geographer},
	year = {2012},
	note = {PI Plum Data},
	keywords = {disturbance, emotion, land use, lawn, LTER-PIE, Massachusetts, primary production, suburbs, yard},
	doi = {10.1080/00330124.2012.681586},
	author = {Harris, E.M. and Martin, D.G. and Polsky, C. and Denhardt, L. and Nehring, A.}
}
@article {PIE298,
	title = {Local scale carbon budgets and mitigation opportunities for the Northeastern United States.},
	journal = {BioScience},
	volume = {62},
	year = {2012},
	note = {PI Plum Data},
	pages = {23-38},
	keywords = {carbon, climate change, disturbance, energy, land use, LTER-PIE},
	doi = {10.1525/bio.2012.62.1.7},
	author = {Raciti, S. and Fahey, T. and Hall, B. and Driscoll, C. and Carranti, F.J. and Foster, D. and Gwyther, P.S. and Jenkins, J. and Hamburg, S. and Neill, C. and Ollinger, S. and Peery, B.W. and Quigley, E. and Sherman, R. and Thomas, R.Q. and Vadeboncoeur, T.M. and Weinstein, D. and Wilson, G. and Woodbury, P. and Yandik, W.}
}
@mastersthesis {PIE260,
	title = {Sensitivity of land cover analysis to category aggregation},
	volume = {MS Degree},
	year = {2010},
	note = {Grad},
	school = {Clark University},
	type = {mastersthesis},
	address = {Worcester, MA},
	keywords = {disturbance, land cover, LTER-PIE},
	author = {Nguyen, T.}
}
@article {PIE216,
	title = {Uncertainty in the difference between maps of future land change scenarios},
	journal = {Sustainability Science},
	volume = {5},
	year = {2010},
	note = {PI Plum Data},
	pages = {39-50},
	keywords = {accuracy, calibration, disturbance, geomod, land use change, LTER-PIE, model, simulation, Validation},
	doi = {10.1007/s11625-009-0095-z},
	author = {Pontius, R.G., Jr. and Neeti, N.}
}
@article {PIE202,
	title = {Use of non-natal estuaries by migratory striped bass (Morone saxatilis) in summer},
	journal = {Fishery Bulletin},
	volume = {107},
	year = {2009},
	note = {PI Plum Data},
	pages = {329 - 337},
	keywords = {Canada, Chesapeake-bay, habitat, LTER-PIE, markov-chain, movement, patterns, population, population dynamics, salmon, site fidelity, state-space models},
	author = {Mather, M.E. and Finn, J.T. and Ferry, K.H. and Deegan, L.A. and Nelson, G.A.}
}
@article {PIE197,
	title = {Biophysical controls on organic carbon fluxes in fluvial networks},
	journal = {Nature Geoscience},
	volume = {1},
	year = {2008},
	note = {PI Synthesis},
	pages = {95-100},
	keywords = {ecosystem metabolism, estuaries, fluvial networks, heterotrophy, inorganic nutrients, LTER-PIE, organic matter, primary production, rivers},
	doi = {10.1038/ngeo101},
	author = {Battin, T.J. and Kaplan, L. and Findlay, S. and Hopkinson, C. and Marti, E. and Packman, A. and Newbold, J.D. and Sabater, F.}
}
@article {PIE198,
	title = {Consequences of climate change on the ecogeomorphology of coastal wetlands},
	journal = {Estuaries and Coasts},
	volume = {31},
	year = {2008},
	note = {PI Synthesis},
	pages = {477-491},
	keywords = {climate change, coastal wetlands, disturbance, ecogeomorphology, LTER-PIE, organic matter, primary production},
	doi = {10.1007/s12237-008-9047-6},
	author = {Day, J.W. and Christian, R.R. and Boesch, D.M. and Yanez-Arancibia, A. and Morris, J.T. and Twilley, R.R. and Naylor, L. and Schaffner, L. and Stevenson, C.}
}
@article {PIE178,
	title = {Land change: Ecosystem responses to urbanization and pollution across climatic and societal gradients},
	journal = {Frontiers in Ecology and Environment},
	volume = {6},
	number = {5},
	year = {2008},
	note = {PI Synthesis},
	pages = {264-272},
	keywords = {climate change, disturbance, ecosystems, inorganic nutrients, land use, LTER-PIE, population dynamics},
	doi = {10.1890/070147},
	author = {Grimm, N. and Foster, D. and Groffman, P. and Grove, M. and Hopkinson, C. and Nadelhoffer, K. and Pataki, D. and Peters, D.}
}
@article {PIE190,
	title = {Stream denitrification across biomes and its response to anthropogenic nitrate loading},
	journal = {Nature},
	volume = {452},
	year = {2008},
	note = {PI Plum Data},
	pages = {202-206},
	keywords = {denitrification, disturbance, inorganic nutrients, LTER-PIE, nitrogen, nitrogen isotopes, stream network},
	doi = {10.1038/nature06686},
	author = {Mulholland, P. J. and Helton, A. M. and Poole, G.C. and Hall, Jr., R.O. and Hamilton, S. K. and Peterson, B. J. and Tank, J.L. and Ashkenas, L.R. and Cooper, L. W. and Dahm, C. N. and Dodds, W. K. and Findlay, S. E. G. and Gregory, S. V. and Grimm, N.B. and Johnson, S. L. and McDowell, W.H. and Meyer, J. L. and Valett, H. M. and Webster, J. R. and Arango, C. P. and Beaulieu, J. J. and Bernot, M. J. and Burgin, A. J. and Crenshaw, C. L. and Johnson, L.T. and Niederlehner, B. R. and OﾒBrien, J. M. and Potter, J. D. and Sheibley, R.W. and Sobota, D. J. and Thomas, S. M.}
}
@article {,
	title = {Allometric laws and prediction in estuarine and coastal ecology (Invited essay Perspectives section)},
	journal = {Estuaries and Coasts},
	volume = {29},
	year = {2006},
	note = {PD Plum Data},
	pages = {340-344},
	keywords = {allometry, estuary, LTER-PIE, metabolic theory of ecology, prediction},
	doi = {10.1007/BF02782002},
	author = {Harris, L.A. and Duarte, C.M. and Nixon, S.W.}
}
@article {PIE164,
	title = {The HERO REU Experience: Undergraduate Research on Vulnerability to Climate Change in Local Places.},
	journal = {Geographical Bulletin},
	volume = {47},
	number = {2},
	year = {2005},
	note = {Collab Plum Data},
	pages = {65-72},
	keywords = {GIS, HERO, Ipswich, LTER-PIE},
	author = {Sorrensen, C. and Polsky, C. and Neff, R.}
}
@article {PIE152,
	title = {Integrating LIDAR, multispectral imagery and neural network modeling techniques for marsh classification.},
	journal = {International Journal of Remote Sensing},
	volume = {26},
	year = {2005},
	note = {PI Coastal},
	pages = {5221-5234},
	keywords = {disturbance, elevation, LiDAR, LTER-PIE, marsh classification, neural network modeling, population dynamics, primary production, sea level},
	doi = {10.1080/01431160500219018},
	author = {Morris, J. T. and Porter, D. and Neet, M. and Noble, P.A. and Schmidt, L. and Lapine, L.A. and Jensen, J.}
}
@article {PIE129,
	title = {Flow Cytometry-Assisted Cloning of Specific Sequence Motifs from Complex 16S rRNA Gene Libraries},
	journal = {Applied and Environmental Microbiology},
	volume = {70},
	year = {2004},
	note = {Collab Plum Data},
	pages = {7550-7554},
	keywords = {bacteria, flow cytometry, LTER-PIE},
	doi = {10.1128/AEM.70.12.7550-7554.2004},
	author = {Nielsen, J.L. and Schramm, A. and Bernhard, A.E. and van den EnghG.J. and Stahl, D.A.}
}
@article {PIE96,
	title = {Direct profiling of environmental microbial populations by thermal dissociation analysis of native ribosomal RNAs hybridized to oligonucleotide microarrays.},
	journal = {Applied Environmental Microbiology},
	volume = {69},
	year = {2003},
	note = {Collab Plum Data},
	pages = {2377-2382},
	keywords = {LTER-PIE, microbes, population, RNA},
	doi = {10.1128/AEM.69.4.2377-2382.2003},
	author = {El Fantroussi, S. and Urakawa, H. and Bernhard, A.E. and Kelly, J.J. and Noble, P.A. and Stahl, D.A.}
}
@article {PIE79,
	title = {Decomposition of dissolved organic matter from the continental margin},
	journal = {Deep Sea Research II},
	volume = {49},
	year = {2002},
	note = {PI Coastal},
	pages = {4461-4478},
	keywords = {decomposition, dissolved organic matter, LTER-PIE},
	doi = {10.1016/S0967-0645(02)00125-X},
	author = {Hopkinson, C.S. and Vallino, J. and Nolin, A.}
}
@article {PIE88,
	title = {A monitoring protocol to assess tidal restoration of salt marshes on local and regional scales},
	journal = {Restoration Ecology},
	volume = {10},
	year = {2002},
	note = {PI Coastal},
	pages = {556-563},
	keywords = {LTER-PIE, salt marsh restoration, tidal restrictions},
	doi = {10.1046/j.1526-100X.2002.02033.x},
	author = {Neckles, H. and Dionne, M. and Burdick, D. and Buchsbaum, R. and Diers, T. and Hutchins, E. and Roman, C.}
}
@article {PIE87,
	title = {Responses of coastal wetlands to rising sea level},
	journal = {Ecology},
	volume = {83},
	year = {2002},
	note = {PI Coastal},
	pages = {2869-2877},
	keywords = {coastal wetlands, LTER-PIE, model, optimal elevation, organic matter, salt marsh, sea-level rise, sediment accretion, sedimentation, Spartina},
	doi = {10.1890/0012-9658(2002)083[2869:ROCWTR]2.0.CO;2},
	author = {Morris, J. and Sundareshwar, P.V. and Nietch, C.T. and Kjerfve, B and Cahoon, D.R.}
}
@mastersthesis {PIE61,
	title = {Quantifying the effectivness of conservation projects 1.},
	volume = {M.S.},
	year = {2001},
	note = {Grad},
	school = {Clark University},
	type = {mastersthesis},
	address = {Worcester},
	keywords = {conservation, GIS, land use, LTER-PIE, modeling},
	author = {Nelson, A.}
}
@book {PIE36,
	title = {Clean Coastal Waters: Understanding and reducing the effects of nutrient pollution.},
	series = {Ocean Studies Board and Water Science and Technology Board, Commission on Geosciences, Environment, and Resources, National Research Council.},
	year = {2000},
	note = {PI Synthesis},
	publisher = {National Academy of Sciences},
	organization = {National Academy of Sciences},
	address = {Washington, DC},
	keywords = {estuary, eutrophication, LTER-PIE, marine, nutrient},
	author = {Howarth, R. W. and Anderson, D. and Church, T. and Greening, H. and Hopkinson, C. and Huber, W. and Marcus, N. and Naiman, R. and Segerson, K. and Sharpley, A. and Wiseman, W.},
	editor = {Committee on the Causes and Management of Coastal Eutrophication}
}
@article {PIE2,
	title = {13C/12C composition of marine dissolved organic carbon.},
	journal = {Chemical Geology},
	volume = {152},
	year = {1998},
	note = {PI Coastal},
	pages = {113 - 118},
	keywords = {dissolved organic carbon, marine, organic matter, PIE LMER, sedimentary organic material, stable isotopes},
	doi = {10.1016/S0009-2541(98)00100-4},
	author = {Fry, B. and Hopkinson, C. and Nolin, A. and Wainright, S.}
}
