@article {8776, title = {Frequent Storm Surges Affect the Groundwater of Coastal Ecosystems}, journal = {Geophysical Research Letters}, volume = {501815}, year = {2023}, month = {Apr-01-2024}, issn = {0094-8276}, doi = {10.1029/2022GL100191}, url = {https://onlinelibrary.wiley.com/doi/10.1029/2022GL100191}, author = {Nordio, Giovanna and Frederiks, Ryan and Hingst, Mary and Carr, Joel and Kirwan, Matt and Gedan, Keryn and Michael, Holly and Fagherazzi, Sergio} } @inbook {hopkinson_global_2023, title = {Global Change and Estuarine Carbon Dynamics}, booktitle = {Climate Change and Estuaries}, year = {2023}, publisher = {CRC Press}, organization = {CRC Press}, abstract = {Carbon (C) is the central building block of all organic matter and the currency by which ecologists and biogeochemists often measure the performance of natural ecosystems and human-controlled systems, including forests, agriculture, and aquaculture. CO2 gas in the atmosphere plays a major role in defining the earth{\textquoteright}s climate and it is the global C cycle operating on geologic time scales that dictates its long-term concentration. Since the industrial revolution and the large-scale burning of fossil fuels in the 1800s, however, the atmospheric concentration of CO2 has increased by over 120 ppm and is now out of balance with geological cycles of weathering and subduction. This has led to an alteration of the earth{\textquoteright}s heat balance and temperature, which has been affecting the performance of all ecosystems. Here, we discuss the effects of climate change and many other human activities, such as land-use change, on estuarine C budgets and dynamics. We evaluate the processes of primary production, autotrophic and heterotrophic respiration, net ecosystem production, C burial, and the exchange of dissolved and particulate forms of organic and inorganic carbon with adjacent land and ocean realms. We examine a suite of external drivers (including nitrogen deposition, human population, river engineering, land use and land cover, climate variability and extreme events, and land management practices on the timing, quantity, and quality of watershed inputs to the coast. We examine drivers of estuarine ecosystem performance also, including light, temperature, precipitation, tides, currents, waves, and sea-level rise. Our interest is not only in the rates of key ecosystem processes, such as primary production, but also in the shift in the relative habitat makeup of estuarine ecosystems, including tidal wetlands, seagrass meadows, open water tidal creeks, sounds, and bays. Finally, we summarize a recently completed C budget for estuaries of the continental USA.}, isbn = {978-1-00-312609-6}, url = {https://www.taylorfrancis.com/chapters/edit/10.1201/9781003126096-11/global-change-estuarine-carbon-dynamics-charles-hopkinson-nathaniel-weston-wei-jun-cai}, author = {Hopkinson, Charles and Weston, Nathaniel and Cai, Wei-Jun} } @article {jankowski_long-term_2023, title = {Long-Term Changes in Concentration and Yield of Riverine Dissolved Silicon From the Poles to the Tropics}, journal = {Global Biogeochemical Cycles}, volume = {37}, year = {2023}, pages = {e2022GB007678}, abstract = {Riverine exports of silicon (Si) influence global carbon cycling through the growth of marine diatoms, which account for \~{}25\% of global primary production. Climate change will likely alter river Si exports in biome-specific ways due to interacting shifts in chemical weathering rates, hydrologic connectivity, and metabolic processes in aquatic and terrestrial systems. Nonetheless, factors driving long-term changes in Si exports remain unexplored at local, regional, and global scales. We evaluated how concentrations and yields of dissolved Si (DSi) changed over the last several decades of rapid climate warming using long-term data sets from 60 rivers and streams spanning the globe (e.g., Antarctic, tropical, temperate, boreal, alpine, Arctic systems). We show that widespread changes in river DSi concentration and yield have occurred, with the most substantial shifts occurring in alpine and polar regions. The magnitude and direction of trends varied within and among biomes, were most strongly associated with differences in land cover, and were often independent of changes in river discharge. These findings indicate that there are likely diverse mechanisms driving change in river Si biogeochemistry that span the land-water interface, which may include glacial melt, changes in terrestrial vegetation, and river productivity. Finally, trends were often stronger in months outside of the growing season, particularly in temperate and boreal systems, demonstrating a potentially important role of shifting seasonality for the flux of Si from rivers. Our results have implications for the timing and magnitude of silica processing in rivers and its delivery to global oceans.}, keywords = {and modeling, biogeochemical cycles, biogeochemistry, hydrologic time series analysis, impacts of global change, nutrients and nutrient cycling, processes, river, silica, trends}, issn = {1944-9224}, doi = {10.1029/2022GB007678}, url = {https://onlinelibrary.wiley.com/doi/abs/10.1029/2022GB007678}, author = {Jankowski, Kathi Jo and Johnson, Keira and Sethna, Lienne and Julian, Paul and Wymore, Adam S. and Shogren, Arial J. and Thomas, Patrick K. and Sullivan, Pamela L. and McKnight, Diane M. and McDowell, William H. and Heindel, Ruth and Jones, Jeremy B. and Wollheim, Wilfred and Abbott, Benjamin and Deegan, Linda and Carey, Joanna C.} } @inbook {fagherazzi_ecogeomorphology_2022, title = {Ecogeomorphology of Salt Marshes}, booktitle = {Treatise on Geomorphology (Second Edition)}, year = {2022}, pages = {445 {\textendash} 462}, publisher = {Academic Press}, organization = {Academic Press}, keywords = {Belowground biomass Ecogeomorphology Halophyte vegetation Nutrient enrichment Root scalping Salt marsh Sea level rise Tidal channels Tides and wind waves}, doi = {10.1016/B978-0-12-818234-5.00194-2}, url = {https://www.sciencedirect.com/science/article/pii/B9780128182345001942?via\%3Dihub}, author = {Fagherazzi, S. and FitzGerald, D.M. and Fulweiler, R.W. and Hughes, Z. and Wiberg, P.L. and McGlathery, K.J. and Morris, J.T. and Tolhurst, T. J. and Deegan, L.A. and Johnson, D.S. and Lesser, J.S. and Nelson, J.A.}, editor = {Shroder, J.F.} } @inbook {testa_estuarine_2022, title = {Estuarine Ecosystem Metabolism}, booktitle = {Estuarine Ecology, 3rd. Edition}, year = {2022}, publisher = {Wiley}, organization = {Wiley}, edition = {3}, abstract = {Estuarine Ecology A detailed and accessible exploration of the fundamentals and the latest advances in estuarine ecology In the newly revised third edition of Estuarine Ecology, a team of distinguished ecologists presents the current knowledge in estuarine ecology with particular emphasis on recent trends and advances. The book is accessible to undergraduate students while also providing a welcome summary of up-to-date content for a more advanced readership. This latest edition is optimized for classroom use, with a more intuitive mode of presentation that takes into account feedback from the previous edition{\textquoteright}s readers. Review questions and exercises have been added to assist in the learning and retention of complex concepts. Estuarine Ecology remains the gold standard for the discipline by taking stock of the manifold scientific breakthroughs made in the field since the last edition was written. It also offers: Thorough introductions to estuarine geomorphology, circulation, and chemistry In-depth treatments of estuarine primary and secondary production, including coastal marshes and mangrove wetlands A holistic view of estuarine ecosystems, their modeling and analysis, as well as the impact of human activities and climate change A companion website with detailed answers to exercise questions Perfect for students of estuarine ecology, environmental science, fisheries science, oceanography, and natural resource management, Estuarine Ecology will also earn a place in the libraries of professionals, government employees, and consultants working on estuary and wetlands management and conservation.}, isbn = {978-1-119-53465-5}, url = {https://www.wiley.com/en-us/Estuarine+Ecology\%2C+3rd+Edition-p-9781119534655}, author = {Testa, Jeremy M. and Hopkinson, Charles S. and Stӕhr, Peter A. and Weston, Nathaniel} } @article {alizad_integrated_2022, title = {Integrated Modeling of Dynamic Marsh Feedbacks and Evolution Under Sea-Level Rise in a Mesotidal Estuary (Plum Island, MA, USA)}, journal = {Water Resources Research}, volume = {58}, year = {2022}, pages = {e2022WR032225}, abstract = {Around the world, wetland vulnerability to sea-level rise (SLR) depends on different factors including tidal regimes, topography, creeks and estuary geometry, sediment availability, vegetation type, etc. The Plum Island estuary (PIE) is a mesotidal wetland system on the east coast of the United States. This research applied a newly updated Hydro-MEM (integrated hydrodynamic-marsh) model to assess the impacts of intermediate-low (50 cm), intermediate (1 m), and intermediate-high (1.5 m) SLR on marsh evolution by the year 2100. Model advancements include capturing vegetation change, inorganic and below and aboveground organic matter portion of marsh platform accretion, and mudflat creation. Although the results indicate a low vulnerability marsh at the PIE, the vegetation changes from high to low marsh under all SLR scenarios (2\%{\textendash}22\%), with the higher bounds belonging to higher rise scenarios. Lower SLR produces more productive marsh (13\% gain in high productivity regions), whereas the highest SLR scenario causes increased tidal inundation, which leads to loss in productivity (12\% change from high to low productivity regions), generation of mudflats (17\% of the domain land), and marsh migration to higher lands. Sensitive nonlinear tidal flow changes, which may be increased or decreased with SLR as a result of mudflat creation, marsh migration, and bottom friction change, emphasize the importance of integrated modeling approaches that include dynamic marsh feedbacks in hydrodynamic modeling and varying hydrodynamic effects on the marsh system.}, keywords = {hydro-MEM, mesotidal system, salt marsh, sea-level rise}, issn = {1944-7973}, doi = {10.1029/2022WR032225}, url = {https://onlinelibrary.wiley.com/doi/abs/10.1029/2022WR032225}, author = {Alizad, Karim and Morris, James T. and Bilskie, Matthew V. and Passeri, Davina L. and Hagen, Scott C.} } @article {gaiser_long-term_2022, title = {Long-term ecological research and the COVID-19 anthropause: A window to understanding social{\textendash}ecological disturbance}, journal = {Ecosphere}, volume = {13}, year = {2022}, pages = {e4019}, abstract = {The period of disrupted human activity caused by the COVID-19 pandemic, coined the {\textquotedblleft}anthropause,{\textquotedblright} altered the nature of interactions between humans and ecosystems. It is uncertain how the anthropause has changed ecosystem states, functions, and feedback to human systems through shifts in ecosystem services. Here, we used an existing disturbance framework to propose new investigation pathways for coordinated studies of distributed, long-term social-ecological research to capture effects of the anthropause. Although it is still too early to comprehensively evaluate effects due to pandemic-related delays in data availability and ecological response lags, we detail three case studies that show how long-term data can be used to document and interpret changes in air and water quality and wildlife populations and behavior coinciding with the anthropause. These early findings may guide interpretations of effects of the anthropause as it interacts with other ongoing environmental changes in the future, particularly highlighting the importance of long-term data in separating disturbance impacts from natural variation and long-term trends. Effects of this global disturbance have local to global effects on ecosystems with feedback to social systems that may be detectable at spatial scales captured by nationally to globally distributed research networks.}, keywords = {ecosystems, feedback, LTER, press, pulse, recovery, reorganization, resilience}, issn = {2150-8925}, doi = {10.1002/ecs2.4019}, url = {https://onlinelibrary.wiley.com/doi/abs/10.1002/ecs2.4019}, author = {Gaiser, Evelyn E. and Kominoski, John S. and McKnight, Diane M. and Bahlai, Christie A. and Cheng, Chingwen and Record, Sydne and Wollheim, Wilfred M. and Christianson, Kyle R. and Downs, Martha R. and Hawman, Peter A. and Holbrook, Sally J. and Kumar, Abhishek and Mishra, Deepak R. and Molotch, Noah P. and Primack, Richard B. and Rassweiler, Andrew and Schmitt, Russell J. and Sutter, Lori A.} } @article {liu_long-term_2022, title = {Long-term variations in water discharge and sediment load of the Pearl River Estuary: Implications for sustainable development of the Greater Bay Area}, journal = {Frontiers in Marine Science}, volume = {9}, year = {2022}, abstract = {The water discharge and sediment load have been increasingly altered by climate change and human activities in recent decades. For the Pearl River, however, long-term variations in the sediment regime, especially in the last decade, remain poorly known. Here we updated knowledge of the temporal trends in the sediment regime of the Pearl River at annual, seasonal and monthly time scales from the 1950s to 2020. Results show that the annual sediment load and suspended sediment concentration (SSC) exhibited drastically decreased, regardless of water discharge. Compared with previous studies, we also found that sediment load and SSC reached a conspicuous peak in the 1980s, and showed a significant decline starting in the 2000s and 1990s, respectively. In the last decade, however, water discharge and sediment load showed slightly increasing trends. At the seasonal scale, the wet-season water discharge displays a decreasing trend, while the dry-season water discharge is increasing. At the monthly scale, the flood seasons in the North and East Rivers typically occur one month earlier than that in the West River due to the different precipitation regimes. Precipitation was responsible for the long-term change of discharge, while human activities (e.g. dam construction and land use change) exerted different effects on the variations in sediment load among different periods. Changes in the sediment regime have exerted substantial influences on downstream channel morphology and saltwater intrusion in the Greater Bay Area. Our study proposes a watershed-based solution, and provides scientific guidelines for the sustainable development of the Greater Bay Area.}, issn = {2296-7745}, url = {https://www.frontiersin.org/articles/10.3389/fmars.2022.983517}, author = {Liu, Zezheng and Fagherazzi, Sergio and Liu, Xinhui and Shao, Dongdong and Miao, Chiyuan and Cai, Yanzi and Hou, Congyu and Liu, Yeling and Li, Xia and Cui, Baoshan} } @article {huang_removal_2022, title = {Removal of {Fecal} {Indicator} {Bacteria} by {River} {Networks}}, journal = {Water}, volume = {14}, number = {4}, year = {2022}, month = {feb}, pages = {617}, abstract = {Fecal contamination is a significant source of water quality impairment globally. Aquatic ecosystems can provide an important ecosystem service of fecal contamination removal. Understanding the processes that regulate the removal of fecal contamination among river networks across flow conditions is critical. We applied a river network model, the Framework for Aquatic Modeling in the Earth System (FrAMES-Ecoli), to quantify removal of fecal indicator bacteria by river networks across flow conditions during summers in a series of New England watersheds of different characteristics. FrAMES-Ecoli simulates sources, transport, and riverine removal of Escherichia coli (E. coli). Aquatic E. coli removal was simulated in both the water column and the hyporheic zone, and is a function of hydraulic conditions, flow exchange rates with the hyporheic zone, and die-off in each compartment. We found that, at the river network scale during summers, removal by river networks can be high (19{\textendash}99\%) with variability controlled by hydrologic conditions, watershed size, and distribution of sources in the watershed. Hydrology controls much of the variability, with 68{\textendash}99\% of network scale inputs removed under base flow conditions and 19{\textendash}85\% removed during storm events. Removal by the water column alone could not explain the observed pattern in E. coli, suggesting that processes such as hyporheic removal must be considered. These results suggest that river network removal of fecal indicator bacteria should be taken into consideration in managing fecal contamination at critical downstream receiving waters.}, issn = {2073-4441}, doi = {10.3390/w14040617}, url = {https://www.mdpi.com/2073-4441/14/4/617}, author = {Huang, Tao and Wollheim, Wilfred M. and Jones, Stephen H.} } @article {wollheim_superlinear_2022, title = {Superlinear scaling of riverine biogeochemical function with watershed size}, journal = {Nature Communications}, volume = {13}, number = {1}, year = {2022}, pages = {1230}, abstract = {River networks regulate carbon and nutrient exchange between continents, atmosphere, and oceans. However, contributions of riverine processing are poorly constrained at continental scales. Scaling relationships of cumulative biogeochemical function with watershed size (allometric scaling) provide an approach for quantifying the contributions of fluvial networks in the Earth system. Here we show that allometric scaling of cumulative riverine function with watershed area ranges from linear to superlinear, with scaling exponents constrained by network shape, hydrological conditions, and biogeochemical process rates. Allometric scaling is superlinear for processes that are largely independent of substrate concentration (e.g., gross primary production) due to superlinear scaling of river network surface area with watershed area. Allometric scaling for typically substrate-limited processes (e.g., denitrification) is linear in river networks with high biogeochemical activity or low river discharge but becomes increasingly superlinear under lower biogeochemical activity or high discharge, conditions that are widely prevalent in river networks. The frequent occurrence of superlinear scaling indicates that biogeochemical activity in large rivers contributes disproportionately to the function of river networks in the Earth system.}, issn = {2041-1723}, doi = {10.1038/s41467-022-28630-z}, url = {https://doi.org/10.1038/s41467-022-28630-z}, author = {Wollheim, Wilfred M. and Harms, Tamara K. and Robison, Andrew L. and Koenig, Lauren E. and Helton, Ashley M. and Song, Chao and Bowden, William B. and Finlay, Jacques C.} } @article {mori_biodiversityproductivity_2021, title = {Biodiversity{\textendash}productivity relationships are key to nature-based climate solutions}, journal = {Nature Climate Change}, volume = {11}, number = {6}, year = {2021}, month = {jun}, pages = {543{\textendash}550}, issn = {1758-678X, 1758-6798}, doi = {10.1038/s41558-021-01062-1}, url = {http://www.nature.com/articles/s41558-021-01062-1}, author = {Mori, Akira S. and Dee, Laura E. and Gonzalez, Andrew and Ohashi, Haruka and Cowles, Jane and Wright, Alexandra J. and Loreau, Michel and Hautier, Yann and Newbold, Tim and Reich, Peter B. and Matsui, Tetsuya and Takeuchi, Wataru and Okada, Kei-ichi and Seidl, Rupert and Isbell, Forest} } @article {iwaniec_connectivity_2021, title = {Connectivity: insights from the {U}.{S}. {Long} {Term} {Ecological} {Research} {Network}}, journal = {Ecosphere}, volume = {12}, number = {5}, year = {2021}, month = {may}, issn = {2150-8925, 2150-8925}, doi = {10.1002/ecs2.3432}, url = {https://onlinelibrary.wiley.com/doi/10.1002/ecs2.3432}, author = {Iwaniec, David M. and Gooseff, Michael and Suding, Katharine N. and Samuel Johnson, David and Reed, Daniel C. and Peters, Debra P. C. and Adams, Byron and Barrett, John E. and Bestelmeyer, Brandon T. and Castorani, Max C. N. and Cook, Elizabeth M. and Davidson, Melissa J. and Groffman, Peter M. and Hanan, Niall P. and Huenneke, Laura F. and Johnson, Pieter T. J. and McKnight, Diane M. and Miller, Robert J. and Okin, Gregory S. and Preston, Daniel L. and Rassweiler, Andrew and Ray, Chris and Sala, Osvaldo E. and Schooley, Robert L. and Seastedt, Timothy and Spasojevic, Marko J. and Vivoni, Enrique R.} } @article {avolio_determinants_2021, title = {Determinants of community compositional change are equally affected by global change}, journal = {Ecology Letters}, volume = {24}, number = {9}, year = {2021}, month = {sep}, pages = {1892{\textendash}1904}, issn = {1461-023X, 1461-0248}, doi = {10.1111/ele.13824}, url = {https://onlinelibrary.wiley.com/doi/10.1111/ele.13824}, author = {Avolio, Meghan L. and Komatsu, Kimberly J. and Collins, Scott L. and Grman, Emily and Koerner, Sally E. and Tredennick, Andrew T. and Wilcox, Kevin R. and Baer, Sara and Boughton, Elizabeth H. and Britton, Andrea J. and Foster, Bryan and Gough, Laura and Hovenden, Mark and Isbell, Forest and Jentsch, Anke and Johnson, David S. and Knapp, Alan K. and Kreyling, Juergen and Langley, J. Adam and Lortie, Christopher and McCulley, Rebecca L. and McLaren, Jennie R. and Reich, Peter B. and Seabloom, Eric W. and Smith, Melinda D. and Suding, Katharine N. and Suttle, K. Blake and Tognetti, Pedro M.}, editor = {Anderson, Marti} } @inbook {morris_marsh_2021, title = {Marsh Equilibrium Theory: Implications for Responses to Rising Sea Level}, booktitle = {Salt Marshes: Function, Dynamics, and Stresses}, year = {2021}, pages = {157{\textendash}177}, publisher = {Cambridge University Press}, organization = {Cambridge University Press}, address = {Cambridge}, abstract = {The analysis presented here was motivated by an objective of describing the interactions between the physical and biological processes governing the responses of tidal wetlands to rising sea level and the ensuing equilibrium elevation. We define equilibrium here as meaning that the elevation of the vegetated surface relative to mean sea level (MSL) remains within the vertical range of tolerance of the vegetation on decadal time scales or longer. The equilibrium is dynamic, and constantly responding to short-term changes in hydrodynamics, sediment supply, and primary productivity. For equilibrium to occur, the magnitude of vertical accretion must be great enough to compensate for change in the rate of sea-level rise (SLR). SLR is defined here as meaning the local rate relative to a benchmark, typically a gauge. Equilibrium is not a given, and SLR can exceed the capacity of a wetland to accrete vertically.}, isbn = {9781107186286}, doi = {10.1017/9781316888933.009}, url = {https://www.cambridge.org/core/books/salt-marshes/marsh-equilibrium-theory/DA7B5EFE9C8CE403EF2190CC60D968EF}, author = {Morris, James T. and Cahoon, Donald R. and Callaway, John C. and Craft, Christopher and Neubauer, Scott C. and Weston, Nathaniel B.}, editor = {FitzGerald, Duncan M. and Hughes, Zoe J.} } @inbook {giblin_role_2021, title = {The Role of Marshes in Coastal Nutrient Dynamics and Loss}, booktitle = {Salt Marshes: Function, Dynamics, and Stresses}, year = {2021}, pages = {113{\textendash}154}, publisher = {Cambridge University Press}, organization = {Cambridge University Press}, address = {Cambridge}, abstract = {Sixty-five years ago, Teal{\textquoteright}s (1962) study showed that salt marsh primary production was greater than community respiration. To explain this result, he suggested that marshes exported excess organic matter either directly as organic matter, or as organisms, to coastal waters. This concept, that marshes were {\textquotedblleft}outwelling{\textquotedblright} material to the adjacent estuary and coastal oceans, was soon expanded to nutrients as well. However, the actual importance of the marsh in supplying organic matter and nutrients to adjacent coastal systems has been controversial and reviews debating the importance of outwelling from marshes have regularly appeared over the decades (Nixon 1980, Childers et al. 2000, Odum 2000, Valiela et al. 2000, Boynton and Nixon 2013). It has also been argued that in some cases the coastal ocean can act as a source of nutrients to the marsh and estuary ({\textquotedblleft}inwelling{\textquotedblright}).}, isbn = {9781107186286}, doi = {10.1017/9781316888933.007}, url = {https://www.cambridge.org/core/books/salt-marshes/role-of-marshes-in-coastal-nutrient-dynamics-and-loss/37F846FC47337398702C4F08838F9245}, author = {Giblin, Anne E. and Fulweiler, Robinson W. and Hopkinson, Charles S.}, editor = {FitzGerald, Duncan M. and Hughes, Zoe J.} } @article {hanley_short-_2021, title = {Short- and long-term effects of nutrient enrichment on salt marsh plant production and microbial community structure}, journal = {Journal of Ecology}, volume = {109}, year = {2021}, pages = {3779{\textendash}3793}, abstract = {Nutrient enrichment impacts ecosystems globally. Population history, especially past resource environments, of numerically dominant plant species may affect their responses to subsequent changes in nutrient availability. Eutrophication can also alter plant{\textendash}microbe interactions via direct effects on associated microbial communities or indirect effects on dominant species{\textquoteright} biomass production/allocation as a result of modified plant{\textendash}soil interactions. We combined a greenhouse common garden and a field reciprocal transplant of a salt marsh foundation species (Spartina alterniflora) within a long-term, whole-ecosystem, nutrient-enrichment study to determine whether enrichment affects plant production and microbial community structure differently depending on plant population history. For the greenhouse portion, we collected 20 S. alterniflora genotypes{\textemdash}10 from an enriched creek that had received elevated nutrient inputs for 10 years and 10 from an unenriched reference creek{\textemdash}and reared them in a common garden for 1 year. For the field portion, we conducted a 2-year, fully crossed reciprocal transplant experiment with two gardens each at the enriched and unenriched sites; we examined the effects of source site (i.e. population history), garden site and plant genotype. After 2 years, plants in enriched gardens had higher above-ground biomass and altered below-ground allocation compared to plants in unenriched gardens. However, performance also depended on plant population history: plants from the enriched site had decreased above-ground and rhizome production compared to plants from the unenriched site, most notably in unenriched gardens. In addition, almost all above- and below-ground traits varied depending on plant genotypic identity. Effects of nutrient enrichment on the associated microbial community were also pronounced. Following 1 year in common garden, microbial community structure varied by plant population history and S. alterniflora genotypic identity. However, at the end of the reciprocal transplant, microbial communities differed primarily between enriched and unenriched gardens. Synthesis. Nutrient enrichment can impact plant foundation species and associated soil microbes in the short term. Most importantly, nutrient enrichment can also have long-lasting effects on plant populations and associated microbial communities that potentially compromise their ability to respond to changing resource conditions in the future.}, keywords = {fertilization, genotype, genotypic identity, GxE, plant{\textendash}microbe interactions, plant{\textendash}soil (below-ground) interactions, Plum Island Ecosystems LTER, Spartina alterniflora}, issn = {1365-2745}, doi = {10.1111/1365-2745.13756}, url = {https://onlinelibrary.wiley.com/doi/abs/10.1111/1365-2745.13756}, author = {Hanley, Torrance C. and Bowen, Jennifer L. and Kearns, Patrick J. and Hughes, A. Randall} } @article {hanley_short_2021, title = {Short- and long-term effects of nutrient enrichment on salt marsh plant production and microbial community structure}, journal = {Journal of Ecology}, volume = {109}, number = {11}, year = {2021}, month = {nov}, pages = {3779{\textendash}3793}, issn = {0022-0477, 1365-2745}, doi = {10.1111/1365-2745.13756}, url = {https://onlinelibrary.wiley.com/doi/10.1111/1365-2745.13756}, author = {Hanley, Torrance C. and Bowen, Jennifer L. and Kearns, Patrick J. and Hughes, A. Randall} } @article {waltham_tidal_2021, title = {Tidal {Marsh} {Restoration} {Optimism} in a {Changing} {Climate} and {Urbanizing} {Seascape}}, journal = {Estuaries and Coasts}, volume = {44}, number = {6}, year = {2021}, month = {sep}, pages = {1681{\textendash}1690}, issn = {1559-2723, 1559-2731}, doi = {10.1007/s12237-020-00875-1}, url = {https://link.springer.com/10.1007/s12237-020-00875-1}, author = {Waltham, Nathan J. and Alcott, Caitlin and Barbeau, Myriam A. and Cebrian, Just and Connolly, Rod M. and Deegan, Linda A. and Dodds, Kate and Goodridge Gaines, Lucy A. and Gilby, Ben L. and Henderson, Christopher J. and McLuckie, Catherine M. and Minello, Thomas J. and Norris, Gregory S. and Ollerhead, Jeff and Pahl, James and Reinhardt, James F. and Rezek, Ryan J. and Simenstad, Charles A. and Smith, Joseph A. M. and Sparks, Eric L. and Staver, Lorie W. and Ziegler, Shelby L. and Weinstein, Michael P.} } @inbook {fagherazzi_understanding_2021, title = {Understanding Marsh Dynamics: Modeling Approaches}, booktitle = {Salt Marshes: Function, Dynamics, and Stresses}, year = {2021}, pages = {278{\textendash}299}, publisher = {Cambridge University Press}, organization = {Cambridge University Press}, address = {Cambridge}, abstract = {Salt marshes have received considerable scientific attention in recent years due to a combination of factors. Salt marshes host important ecosystems and store large quantities of carbon in their soils (Fagherazzi et al. 2004; Mudd et al. 2009). Currently salt marshes are endangered by accelerated sea-level rise triggered by global warming (Kirwan et al. 2010). A sharp reduction in sediment supply caused by the damming of rivers is also jeopardizing marsh survival along many coasts (Weston 2014). As a result, there is a need to determine the fate of marshlands in different settings in order to inform government and local communities and implement protection strategies. To this end, numerical models are playing an increasingly important role, because they can easily provide future scenarios of marsh conditions under different forcings. However, the evolution of salt marshes as a function of sea-level rise and sediment supply is relatively complex, because of feedbacks among hydrodynamics, sediment transport, and vegetation (Fagherazzi et al. 2012). As a result, marshes are continuously adjusting to a changing environment, in ways often difficult to predict. This intrinsic complexity has generated a flurry of numerical models, each emphasizing a different aspect of salt marsh evolution. It is thus becoming more and more accepted by the scientific community that a comprehensive model of salt marsh evolution is not feasible, given the number and variety of physical and biological processes at play. A detailed approach, based on the description of all possible processes acting at different spatial and temporal scales, has been slowly replaced by a more practical approach, in which separate models are built to address key important processes or to capture specific dynamics.}, isbn = {9781107186286}, doi = {10.1017/9781316888933.013}, url = {https://www.cambridge.org/core/books/salt-marshes/understanding-marsh-dynamics/A73B50F7C44E8E7029F450916ECDB72B}, author = {Fagherazzi, Sergio and Kearney, William and Mariotti, Giulio and Leonardi, Nicoletta and Nardin, William}, editor = {FitzGerald, Duncan M. and Hughes, Zoe J.} } @article {harati_validating_2021, title = {Validating models of one-way land change: an example case of forest insect disturbance}, journal = {Landscape Ecology}, volume = {36}, number = {10}, year = {2021}, month = {oct}, pages = {2919{\textendash}2935}, issn = {0921-2973, 1572-9761}, doi = {10.1007/s10980-021-01272-0}, url = {https://link.springer.com/10.1007/s10980-021-01272-0}, author = {Harati, Saeed and Perez, Liliana and Molowny-Horas, Roberto and Pontius, Robert Gilmore} } @article {PIE503, title = {A climate migrant escapes its parasites}, journal = {Marine Ecological Progress Series}, volume = {641}, year = {2020}, note = {PI Plum Data}, pages = {111-121}, keywords = {climate change, climate migrant, enemy-release hypothesis, fiddler crab, global change, LTER-PIE, parasite escape, population dynamics, range expansions, range shift}, doi = {10.3354/meps13278}, author = {Johnson, D.S. and Shields, J.D. and Doucette, D. and Heard, R.} } @article {xie_enhanced_2020, title = {Enhanced {Intensity} {Analysis} to {Quantify} {Categorical} {Change} and to {Identify} {Suspicious} {Land} {Transitions}: {A} {Case} {Study} of {Nanchang}, {China}}, journal = {Remote Sensing}, volume = {12}, number = {20}, year = {2020}, pages = {3323}, abstract = {Conventional methods to analyze a transition matrix do not offer in-depth signals concerning land changes. The land change community needs an effective approach to visualize both the size and intensity of land transitions while considering possible map errors. We propose a framework that integrates error analysis, intensity analysis, and difference components, and then uses the framework to analyze land change in Nanchang, the capital city of Jiangxi province, China. We used remotely sensed data for six categories at four time points: 1989, 2000, 2008, and 2016. We had a confusion matrix for only 2016, which estimated that the map of 2016 had a 12\% error, while the temporal difference during 2008{\textendash}2016 was 22\% of the spatial extent. Our tools revealed suspected errors at other years by analyzing the patterns of temporal difference. For example, the largest component of temporal difference was exchange, which could indicate map errors. Our framework identified categories that gained during one time interval then lost during the subsequent time interval, which raised the suspicion of map error. This proposed framework facilitated visualization of the size and intensity of land transitions while illustrating possible map errors that the profession routinely ignores.}, issn = {2072-4292}, doi = {10.3390/rs12203323}, url = {https://www.mdpi.com/2072-4292/12/20/3323}, author = {Xie, Zheyu and Pontius Jr, Robert Gilmore and Huang, Jinliang and Nitivattananon, Vilas} } @article {sills_fisheries_2020, title = {Fisheries rely on threatened salt marshes}, journal = {Science}, volume = {370}, number = {6517}, year = {2020}, month = {nov}, pages = {670{\textendash}671}, issn = {0036-8075, 1095-9203}, doi = {10.1126/science.abe9332}, url = {https://www.science.org/doi/10.1126/science.abe9332}, author = {Baker, Ronald and Taylor, Matthew D. and Able, Kenneth W. and Beck, Michael W. and Cebrian, Just and Colombano, Denise D. and Connolly, Rod M. and Currin, Carolyn and Deegan, Linda A. and Feller, Ilka C. and Gilby, Ben L. and Kimball, Matthew E. and Minello, Thomas J. and Rozas, Lawrence P. and Simenstad, Charles and Turner, R. Eugene and Waltham, Nathan J. and Weinstein, Michael P. and Ziegler, Shelby L. and zu Ermgassen, Philine S.E. and Alcott, Caitlin and Alford, Scott B. and Barbeau, Myriam A. and Crosby, Sarah C. and Dodds, Kate and Frank, Alyssa and Goeke, Janelle and Goodridge Gaines, Lucy A. and Hardcastle, Felicity E. and Henderson, Christopher J. and James, W. Ryan and Kenworthy, Matthew D. and Lesser, Justin and Mallick, Debbrota and Martin, Charles W. and McDonald, Ashley E. and McLuckie, Catherine and Morrison, Blair H. and Nelson, James A. and Norris, Gregory S. and Ollerhead, Jeff and Pahl, James W. and Ramsden, Sarah and Rehage, Jennifer S. and Reinhardt, James F. and Rezek, Ryan J. and Risse, L. Mark and Smith, Joseph A.M. and Sparks, Eric L. and Staver, Lorie W.}, editor = {Sills, Jennifer} } @article {hautier_general_2020, title = {General destabilizing effects of eutrophication on grassland productivity at multiple spatial scales}, journal = {Nature Communications}, volume = {11}, number = {1}, year = {2020}, month = {dec}, pages = {5375}, abstract = {Abstract Eutrophication is a widespread environmental change that usually reduces the stabilizing effect of plant diversity on productivity in local communities. Whether this effect is scale dependent remains to be elucidated. Here, we determine the relationship between plant diversity and temporal stability of productivity for 243 plant communities from 42 grasslands across the globe and quantify the effect of chronic fertilization on these relationships. Unfertilized local communities with more plant species exhibit greater asynchronous dynamics among species in response to natural environmental fluctuations, resulting in greater local stability (alpha stability). Moreover, neighborhood communities that have greater spatial variation in plant species composition within sites (higher beta diversity) have greater spatial asynchrony of productivity among communities, resulting in greater stability at the larger scale (gamma stability). Importantly, fertilization consistently weakens the contribution of plant diversity to both of these stabilizing mechanisms, thus diminishing the positive effect of biodiversity on stability at differing spatial scales. Our findings suggest that preserving grassland functional stability requires conservation of plant diversity within and among ecological communities.}, issn = {2041-1723}, doi = {10.1038/s41467-020-19252-4}, url = {https://www.nature.com/articles/s41467-020-19252-4}, author = {Hautier, Yann and Zhang, Pengfei and Loreau, Michel and Wilcox, Kevin R. and Seabloom, Eric W. and Borer, Elizabeth T. and Byrnes, Jarrett E. K. and Koerner, Sally E. and Komatsu, Kimberly J. and Lefcheck, Jonathan S. and Hector, Andy and Adler, Peter B. and Alberti, Juan and Arnillas, Carlos A. and Bakker, Jonathan D. and Brudvig, Lars A. and Bugalho, Miguel N. and Cadotte, Marc and Caldeira, Maria C. and Carroll, Oliver and Crawley, Mick and Collins, Scott L. and Daleo, Pedro and Dee, Laura E. and Eisenhauer, Nico and Eskelinen, Anu and Fay, Philip A. and Gilbert, Benjamin and Hansar, Amandine and Isbell, Forest and Knops, Johannes M. H. and MacDougall, Andrew S. and McCulley, Rebecca L. and Moore, Joslin L. and Morgan, John W. and Mori, Akira S. and Peri, Pablo L. and Pos, Edwin T. and Power, Sally A. and Price, Jodi N. and Reich, Peter B. and Risch, Anita C. and Roscher, Christiane and Sankaran, Mahesh and Sch{\"u}tz, Martin and Smith, Melinda and Stevens, Carly and Tognetti, Pedro M. and Virtanen, Risto and Wardle, Glenda M. and Wilfahrt, Peter A. and Wang, Shaopeng} } @article {zhang_morphology_2020, title = {On the morphology of radial sand ridges}, journal = {Earth Surface Processes and Landforms}, volume = {45}, number = {11}, year = {2020}, month = {sep}, pages = {2613{\textendash}2630}, issn = {0197-9337, 1096-9837}, doi = {10.1002/esp.4917}, url = {https://onlinelibrary.wiley.com/doi/10.1002/esp.4917}, author = {Zhang, Weina and Zhang, Xiaohe and Huang, Huiming and Wang, Yigang and Fagherazzi, Sergio} } @article {PIE497, title = {Oxygen and Triple Oxygen Isotope Measurements Provide Different Insights into Gross Oxygen Production in a Shallow Salt Marsh Pond.}, journal = {Estuaries and Coasts}, year = {2020}, note = {Grad}, keywords = {light-dependent respiration, LTER-PIE, metabolism, oxygen, pond, primary production, salt marsh, triple oxygen isotopes}, doi = {10.1007/s12237-020-00757-6}, author = {Howard, E.M. and Spivak, A.C. and Karolewski, J.S. and Gosslein, K.M. and Sandwidth, Z.O. and Manning, C.C. and Stanley, R.H.R} } @article {PIE488, title = {Tidal Wetland Gross Primary Production Across the Continental United States, 2000{\textendash}2019.}, journal = {Global Biogeochemical Cycles}, volume = {34}, year = {2020}, note = {PI}, keywords = {blue carbon, eddy covariance, LTER-PIE, organic matter, primary production, tidal wetlands}, doi = {10.1029/2019GB006349}, author = {Feagin, A. and Forbrich, I. and Huff, T.P. and Barr, J. G. and Ruiz-Plancarte, J. and Fuentes, J. D. and NaJJar, R. G. and Vargas, R. and V{\'a}zquez-Lule, A. and Windham-Myers. L. and Kroeger, K. D. and Ward, E. J. and Moore, G. W. and Leclerc, M. and Krauss, K. W. and Stagg, C. L. and Alber, M. and Knox, S. H. and Sch{\"a}fer, K.V.R. and Bianchi, T. S. and Hutchings, J. A. and Nahrawi, H. and Noormets, A. and Mitra, B. and Jaimes, A. and Hinson, A. L. and Bergamaschi, B. and King, J. S. and Miao, G.} } @article {PIE472, title = {Fluid geochemistry, local hydrology, and metabolic activity define methanogen community size and composition in deep-sea hydrothermal vents}, journal = {ISME}, year = {2019}, note = {PI}, keywords = {flow path geometry, LTER-PIE, methanogens, microbial communities, population dynamics}, doi = {10.1038/s41396-019-0382-3}, author = {Stewart, L.C. and Algar, C.K. and Fortunato, C.S. and Larson, B.I. and Vallino, J.J. and Huber, J.A. and Butterfield, D.A. and Holden, J.F.} } @article {PIE486, title = {Global-change controls on soil-carbon accumulation and loss in coastal vegetated ecosystems}, journal = {Nature Geoscience}, volume = {12}, year = {2019}, note = {PI Synthesis}, pages = {685-692}, keywords = {blue-carbon, decomposition, disturbance, LTER-PIE, mangrove, organic matter, salt marsh, seagrass, soil accumulation}, doi = {10.1038/s41561-019-0435-2}, author = {Spivak, A.C. and Sanderman, J. and Bowen, J.L. and Canuel, E.A. and Hopkinson, C.S.} } @article {PIE499, title = {Global-change effects on plant communities are magnified by time and the number of global-change factors imposed.}, journal = {Proceedings of the National Academy of Sciences of the United States of America}, volume = {116}, year = {2019}, note = {PI Plum Data}, pages = {17867-17873}, keywords = {community composition, global change experiments, herbaceous plants, LTER-PIE, population dynamics, species richness}, doi = {10.1073/pnas.1819027116}, author = {Komatsu, K.J. and Avolio, M.L and Lemoine, N.P. and Isbell, F. and Grman, E. and Houseman, G.R. and Koerner, S.E. and Johnson, D.S. and Wilcox, K.R. and Alatalo, J.M. and Anderson, J.P. and Aerts, R. and Baer, S.G. and Baldwin, A.H. and Bates, J. and Beierkuhnlein, C. and Belote, R.T. and Blair, J. and Bloor, J.M.G. and Bohlen, P.J. and Bork, E.W. and Boughton, E.H. and Bowman, W.D. and Britton, A.J. and Cahill Jr, J.F. and Chaneton, E. and Chiariello, N.R. and Cheng, J.} } @techreport {PIE469, title = {Hurricane Sandy Impacts on Coastal Wetland Resilience}, year = {2019}, note = {PI Plum Data}, pages = {117}, institution = {USGS}, keywords = {accretion, LTER-PIE, disturbance, salt marsh, sedimentation, wetlands}, issn = {2018{\textendash}1142}, doi = {10.3133/ofr20181142}, author = {Cahoon, D.R. and Olker, J.H. and Yeates, A.G. and Guntenspergen, G.R. and Grace, J.B. and Adamowicz, S.C. and Anisfeld, S., and Baldwin, A.H. and Barrett, N., and Beckett, L., and Benzecry, A. and Blum, L.K., and Burdick, D.M., and Crouch, W. and Ekberg, M.C. and Fernald, S. and Grimes, K.W. and Grzyb, J. and Hartig, E.K. and Kreeger, D.A. and Larson, M. and Lerberg, S. and Lynch, J.C. and Maher, N. and Maxwell-Doyle, M. and Mitchell, L.R. and Mora, J. and O{\textquoteright}Neill, V. and Padeletti, A. and Prosser, D. and Quirk, T. and Raposa, K.B. and Reay, W.G. and Siok, D. and Snow, C. and Starke, A. and Staver, L. and Stevenson, J.C. and Turner, V.}, editor = {USGS} } @article {PIE496, title = {Intensity Analysis to communicate land change during three time intervals in two regions of Quanzhou City, China.}, journal = {GIScience \& Remote Sensing}, year = {2019}, note = {PI}, keywords = {China, GIS, intensity analysis, land change, LTER-PIE, Quanzhou City, regionalization}, doi = {10.1080/15481603.2019.1658420}, author = {Quan, B. and Pontius Jr, R.G. and Song H.} } @article {PIE479, title = {Nitrate addition stimulates microbial decomposition of organic matter in salt marsh sediments}, journal = {Global Change Biology}, year = {2019}, note = {PI}, keywords = {16S rRNA gene, anaerobic respiration, decomposition, flow through reactor, inorganic nitrogen, LTER-PIE, microbes, nitrate, organic matter, salt marsh}, doi = {10.1111/gcb.14726}, author = {Bulseco, A.N. and Giblin, A.E. and Tucker, J. and Murphy, A.E. and Hiller-Bittrolff, K. and Bowen, J.L.} } @article {kearns_nutrient_2019, title = {Nutrient {Enrichment} {Alters} {Salt} {Marsh} {Fungal} {Communities} and {Promotes} {Putative} {Fungal} {Denitrifiers}}, journal = {Microbial Ecology}, volume = {77}, number = {2}, year = {2019}, month = {feb}, pages = {358{\textendash}369}, issn = {0095-3628, 1432-184X}, doi = {10.1007/s00248-018-1223-z}, url = {http://link.springer.com/10.1007/s00248-018-1223-z}, author = {Kearns, Patrick J. and Bulseco-McKim, Ashley N. and Hoyt, Helen and Angell, John H. and Bowen, Jennifer L.} } @article {bortolus_supporting_2019, title = {Supporting \textit{{Spartina}} : {Interdisciplinary} perspective shows \textit{{Spartina}} as a distinct solid genus}, journal = {Ecology}, volume = {100}, number = {11}, year = {2019}, issn = {0012-9658, 1939-9170}, doi = {10.1002/ecy.2863}, url = {https://onlinelibrary.wiley.com/doi/10.1002/ecy.2863}, author = {Bortolus, Alejandro and Adam, Paul and Adams, Janine B. and Ainouche, Malika L. and Ayres, Debra and Bertness, Mark D. and Bouma, Tjeerd J. and Bruno, John F. and Ca{\c c}ador, Isabel and Carlton, James T. and Castillo, Jesus M. and Costa, Cesar S. B. and Davy, Anthony J. and Deegan, Linda and Duarte, Bernardo and Figueroa, Enrique and Gerwein, Joel and Gray, Alan J. and Grosholz, Edwin D. and Hacker, Sally D. and Hughes, A. Randall and Mateos-Naranjo, Enrique and Mendelssohn, Irving A. and Morris, James T. and Mu{\~n}oz-Rodr{\'\i}guez, Adolfo F. and Nieva, Francisco J. J. and Levin, Lisa A. and Li, Bo and Liu, Wenwen and Pennings, Steven C. and Pickart, Andrea and Redondo-G{\'o}mez, Susana and Richardson, David M. and Salmon, Armel and Schwindt, Evangelina and Silliman, Brian R. and Sotka, Erik E. and Stace, Clive and Sytsma, Mark and Temmerman, Stijn and Turner, R. Eugene and Valiela, Ivan and Weinstein, Michael P. and Weis, Judith S.} } @article {langley_ambient_2018, title = {Ambient changes exceed treatment effects on plant species abundance in global change experiments}, journal = {Global Change Biology}, volume = {24}, number = {12}, year = {2018}, month = {dec}, pages = {5668{\textendash}5679}, issn = {1354-1013, 1365-2486}, doi = {10.1111/gcb.14442}, url = {https://onlinelibrary.wiley.com/doi/10.1111/gcb.14442}, author = {Langley, J. Adam and Chapman, Samantha K. and La Pierre, Kimberly J. and Avolio, Meghan and Bowman, William D. and Johnson, David S. and Isbell, Forest and Wilcox, Kevin R. and Foster, Bryan L. and Hovenden, Mark J. and Knapp, Alan K. and Koerner, Sally E. and Lortie, Christopher J. and Megonigal, James P. and Newton, Paul C. D. and Reich, Peter B. and Smith, Melinda D. and Suttle, Kenwyn B. and Tilman, David} } @article {PIE451, title = {Comparison of Intensity Analysis and the land use dynamic degrees to measure land changes outside versus inside the coastal zone of Longhai, China}, journal = {Ecological Indicators}, volume = {89}, year = {2018}, note = {PI}, pages = {336-347}, keywords = {coastal area, intensity analysis, land change, land use dynamic degree, LTER-PIE, pattern, urbanization}, doi = {10.1016/j.ecolind.2017.12.057}, author = {Huang, B. and Huang, J. and Pontius, R.G., Jr. and Tu, Z.} } @article {huang_comparison_2018, title = {Comparison of {Intensity} {Analysis} and the land use dynamic degrees to measure land changes outside versus inside the coastal zone of {Longhai}, {China}}, journal = {Ecological Indicators}, volume = {89}, year = {2018}, month = {jun}, pages = {336{\textendash}347}, issn = {1470160X}, doi = {10.1016/j.ecolind.2017.12.057}, url = {https://linkinghub.elsevier.com/retrieve/pii/S1470160X1730849X}, author = {Huang, Boqiang and Huang, Jinliang and Gilmore Pontius, Robert and Tu, Zhenshun} } @article {PIE445, title = {Constraining Marsh Carbon Budgets Using Long-Term C Burial and Contemporary Atmospheric CO2 Fluxes}, journal = {Journal of Geophysical Research: Biogeosciences}, volume = {123}, year = {2018}, note = {PI}, pages = {867-878}, keywords = {carbon burial, carbon dioxide, eddy covariance, LTER-PIE, net ecosystem exchange, primary production, rainfall, salinity, salt marsh}, doi = {10.1002/2017JG004336}, author = {Forbrich, I. and Giblin, A.E. and Hopkinson, C.S.} } @article {PIE471, title = {Discontinuities in soil strength contribute to destabilization of nutrient-enriched creeks}, journal = {Ecosphere}, year = {2018}, note = {PI}, keywords = {disturbance, eutrophication, LTER-PIE, marsh loss, sea level rise, soil shear strength, wetland soil}, doi = {10.1002/ecs2.2329}, author = {Wigand, C. and Watson, E.B. and Martin, R. and Johnson, D.S. and Warren, R.S. and Hansen, A. and Davey, E. and Johnson, R. and Deegan, L.} } @article {PIE449\<br/\>, title = {Lateral Marsh Edge Erosion as a Source of Sediments for Vertical Marsh Accretion}, journal = {Journal of Geophysical Research}, year = {2018}, note = {PI Plum Data}, keywords = {disturbance, erosion, LTER-PIE, organic carbon, organic matter, salt marsh accretion, sea-level rise, sediment, watershed}, doi = {10.1029/2017JG004358}, author = {Hopkinson, C.S. and Morris, J.T. and Fagherazzi, S. and Wollheim, W.M. and Raymond, P. A.} } @article {PIE462, title = {Nutrient Enrichment Alters Salt Marsh Fungal Communities and Promotes Putative Fungal Denitrifiers}, journal = {Microbial Ecology}, year = {2018}, note = {Grad}, keywords = {decomposition, fungal denitrification, fungal ecology, inorganic nutrients, LTER-PIE, nutrient enrichment, organic matter, population dynamics, salt marsh}, doi = {10.1007/s00248-018-1223-z}, author = {Kearns, P.J. and Bulseco-McKim, A.N. and Hoyt, H. and Angell, J.H. and Bowen, J.L.} } @article {PIE480, title = {River network saturation concept: factors influencing the balance of biogeochemical supply and demand of river networks}, journal = {Biogeochemistry}, year = {2018}, note = {PI Synthesis}, keywords = {demand, dissolved, flow regime, fluxes, gases, inorganic nitrogen, LTER-PIE, macrosystems, modeling, removal, retention, river network, saturation, sediment, sensors, supply}, doi = {10.1007/s10533-018-0488-0}, author = {Wollheim, W.M. and Bernal, S. and Burns, D.A. and Czuba, J.A. and Driscoll, C.T. and Hansen, A.T. and Hensley, R.T. and Hosen, J.D. and Inamdar, S. and Kaushal, S.S. and Koenig, L.E. and Lu, Y.H. and Marzadri, A. and Raymond, P.A. and Scott, D. and Stewart, R.J. and Vidon, P.G. and Wohl, E.} } @article {PIE473, title = {Using Maximum Entropy Production to Describe Microbial Biogeochemistry Over Time and Space in a Meromictic Pond}, journal = {Frontiers in Environmental Science}, year = {2018}, note = {PI}, keywords = {community function, inorganic nitrogen, LTER-PIE, maximum entropy production, meromictic, metabolic net works, microbial biogepchemustry, phototrophy}, doi = {10.3389/fenvs.2018.00100}, author = {Vallino, J.J. and Huber, J.A.} } @article {howard_using_2018, title = {Using {Noble} {Gases} to {Compare} {Parameterizations} of {Air}-{Water} {Gas} {Exchange} and to {Constrain} {Oxygen} {Losses} by {Ebullition} in a {Shallow} {Aquatic} {Environment}}, journal = {Journal of Geophysical Research: Biogeosciences}, volume = {123}, number = {9}, year = {2018}, month = {sep}, pages = {2711{\textendash}2726}, issn = {2169-8953, 2169-8961}, doi = {10.1029/2018JG004441}, url = {https://onlinelibrary.wiley.com/doi/10.1029/2018JG004441}, author = {Howard, Evan M. and Forbrich, Inke and Giblin, Anne E. and Lott, Dempsey E. and Cahill, Kevin L. and Stanley, Rachel H. R.} } @article {wilcox_asynchrony_2017, title = {Asynchrony among local communities stabilises ecosystem function of metacommunities}, journal = {Ecology Letters}, volume = {20}, number = {12}, year = {2017}, month = {dec}, pages = {1534{\textendash}1545}, issn = {1461-023X, 1461-0248}, doi = {10.1111/ele.12861}, url = {https://onlinelibrary.wiley.com/doi/10.1111/ele.12861}, author = {Wilcox, Kevin R. and Tredennick, Andrew T. and Koerner, Sally E. and Grman, Emily and Hallett, Lauren M. and Avolio, Meghan L. and La Pierre, Kimberly J. and Houseman, Gregory R. and Isbell, Forest and Johnson, David Samuel and Alatalo, Juha M. and Baldwin, Andrew H. and Bork, Edward W. and Boughton, Elizabeth H. and Bowman, William D. and Britton, Andrea J. and Cahill, James F. and Collins, Scott L. and Du, Guozhen and Eskelinen, Anu and Gough, Laura and Jentsch, Anke and Kern, Christel and Klanderud, Kari and Knapp, Alan K. and Kreyling, Juergen and Luo, Yiqi and McLaren, Jennie R. and Megonigal, Patrick and Onipchenko, Vladimir and Prev{\'e}y, Janet and Price, Jodi N. and Robinson, Clare H. and Sala, Osvaldo E. and Smith, Melinda D. and Soudzilovskaia, Nadejda A. and Souza, Lara and Tilman, David and White, Shannon R. and Xu, Zhuwen and Yahdjian, Laura and Yu, Qiang and Zhang, Pengfei and Zhang, Yunhai}, editor = {Gurevitch, Jessica} } @article {PIE437, title = {Bottom-up control of parasites}, journal = {Ecosphere}, volume = {8}, number = {10}, year = {2017}, note = {PI Plum Data}, keywords = {coastal wetlands, disease ecology, disturbance, eutrophication, fertilizer, host traits, inorganic nutrients, intertidal, LTER-PIE, population dynamics}, doi = {10.1002/ecs2.1885}, author = {Johnson, D.S. and Heard, R.} } @phdthesis {PIE455, title = {Ecosystem metabolism in salt marsh tidal creeks and ponds: Applying triple oxygen isotopes and other gas tracers to novel environments}, volume = {PhD}, year = {2017}, note = {Grad}, school = {Woods Hole Oceanographic Institution/ MIT Joint Program}, type = {phdthesis}, address = {Cambridge, MA}, keywords = {LTER-PIE, organic matter, oxygen, primary production, salt marsh, salt marsh ponds, stable isotopes, tidal creeks}, author = {Howard, E.} } @article {PIE443, title = {Effect of short-term, diel changes in environmental conditions on active microbial communities in a salt marsh pond}, journal = {Aquatc Microbial Ecology}, volume = {80}, year = {2017}, note = {Grad}, pages = {29-41}, keywords = {disturbance, dormancy, LTER-PIE, marsh pond, microbial activity, population dynamics, rare biosphere, salt marsh}, doi = {10.3354/ame01837}, author = {Kearns,P.J. and Holloway, D. and Angell, J.H. and Feinman, S.G. and Bowen, J.L.} } @article {PIE440, title = {Rules to write mathematics to clarify metrics such as the land use dynamic degrees}, journal = {Landscape Ecology}, volume = {32}, number = {12}, year = {2017}, note = {PI}, pages = {2249-2260}, keywords = {annual change percentage, China, CLUDD, disturbance, intensity analysis, land change, LTER-PIE, mathematical notation}, doi = {10.1007/s10980-017-0584-x}, author = {Pontius, R.G., Jr. and Huang, J. and Jiang, W. and Khallaghi, S. and Lin, Y. and Liu, J. and Quan, B. and Ye, S.} } @article {PIE434, title = {Shallow ponds are heterogeneous habitats within a temperate salt marsh ecosystem}, journal = {Journal of Geophysical Research: Biogeosciences}, volume = {122}, year = {2017}, note = {PI Plum Data}, keywords = {inorganic nutrients, LTER-PIE, organic matter, ponds, primary production, salt marsh, system metabolism}, doi = {10.1002/2017JG003780}, author = {Spivak, A.C. and Gosselin, K. and Howard, E. and Mariotti, G. and Forbrich, I. and Stanley, R. and Sylva, S.P.} } @article {PIE444, title = {Variability of Mya arenaria growth along an environmental gradient in the Plum Island Sound estuary, Massachusetts, USA}, journal = {Wetlands Ecology and Management}, volume = {25}, number = {2}, year = {2017}, note = {PI Plum Data}, pages = {235-256}, keywords = {clam growth, environmental gradient, LTER-PIE, Mya arenaria, Plum Island Sound estuary, population dynamics, spatial variation}, doi = {10.1007/s11273-016-9512-0}, author = {Koo, K.A. and Walker, R.L. and Davenport, E.S. and Hopkinson, C.S.} } @article {PIE421, title = {Contributions of organic and inorganic matter to sediment volume and accretion in tidal wetlands at steady state}, journal = {Earth{\textquoteright}s Future}, volume = {4}, year = {2016}, note = {PI Plum Data}, pages = {110-121}, keywords = {accretion, LTER-PIE, organic matter, primary production, sea level, wetlands}, doi = {10.1002/2015EF000334}, author = {Morris, J.T. and Barber, D.C. and Callaway, J.C. and Chambers, R. and Hagen, S.C. and Hopkinson, C.S. and Johnson, B.J. and Megonigal, P. and Neubauer, S.C. and Troxler, T. and Wigand, C.} } @article {PIE420, title = {Nutrient enrichment induces dormancy and decreases diversity of active bacteria}, journal = {Nature Communications}, volume = {7}, year = {2016}, note = {Grad}, keywords = {bacteria, dormancy, LTER-PIE, nutrient enrichment, population dynamics}, doi = {10.1038/ncomms12881}, author = {Kearns, P. and Angell, J.H. and Howard, E. and Deegan, L.A. and Stanley, R.H. and Bowen, J.L.} } @article {PIE410, title = {Satisfaction, water and fertilizer use in the American residential macrosystem}, journal = {Environmental Research Letters}, year = {2016}, note = {PI Plum Data}, keywords = {environmental satisfaction, inorganic nutrients, lawns, LTER-PIE, nitrogen, residential land use, urban ecology, water}, doi = {10.1088/1748-9326/11/3/034004}, author = {Groffman, P.M. and Grove, J.M. and Polsky, C. and Bettez, N.D. and Morse, J.L. and Cavender-Bares, J. and Hall, S.J. and Heffernan, J.B. and Hobbie, S.E. and Larson, K.L. and Neill, C. and Nelson, K. and Ogden, L. and O{\textquoteright}Neil-Dunne, J. and Pataki, D. and Chowdhury, R.R.} } @article {PIE423, title = {SimiVal, a multi-criteria map comparison tool for land-change model projections}, journal = {Environmental Modelling \& Software}, year = {2016}, note = {PI Plum Data}, keywords = {land-change, land-change model, LTER-PIE, map tool}, doi = {10.1016/j.envsoft.2016.04.016}, author = {Bradley, A.V. and Rosa, I.M.D. and Pontius, R.G., Jr. and Ahmed, S.E. and Araujo, M.B. and Brown, D.G. and Brandao Jr, A. and Carnerio, T.G.S. and Hartley, A.J. and Smith, M.J. and Ewers, R.M.} } @article {PIE396, title = {Ecosystem service preferences and priorities for residential landscapes: Homogeneity and heterogeneity across diverse cities. }, journal = {Urban Ecosystems}, year = {2015}, note = {PI Plum Data}, keywords = {ecosystem services, human values, land management, lawns, LTER-PIE, residential landscapes, urban sustainability}, doi = {10.1007/s11252-015-0477}, author = {Larson, K.L. and Nelson, K.C. and Samples, S.R. and Hall, S.J. and Bettez, N.D. and Cavender-Bares, J. and Groffman, P.M. and Grove, M. and Heffernan, J.B. and Hobbie, S. and Learned, J. and Morse, J.L. and Neill, C. and Ogden,L.A. and O{\textquoteright}Neil-Dunne, J. and Pataki, D.E. and Polsky, C. and Chowdhury, R.R. and Steele, M. and Trammell, T.L.E.} } @article {PIE417, title = {A framework for quantifying the magnitude and variability of community responses to global change drivers}, journal = {Ecosphere}, volume = {6}, number = {12}, year = {2015}, note = {PI Synthesis}, keywords = {beta diversity, community dissimilarity, convergence, divergence, LTER-PIE, multivariate analysis, non-metric multidimensional scaling, population dynamics, rank abundance curve, species composition}, doi = {10.1890/ES15-00317.1}, author = {Avolio, M.L and La Pierre, K.J. and Houseman, G.R. and Koerner, S.E. and Grman, E. and Isbell, F. and Johnson, D.S. and Wilcox, K.R.} } @article {PIE408, title = {Increased nitrogen export from eastern North America to the Atlantic Ocean due to climatic and anthropogenic changes during 1901{\textendash}2008}, journal = {Journal of Geophysical Research: Biogeosciences}, volume = {120}, year = {2015}, note = {PI Synthesis}, pages = {1046-1068}, keywords = {disturbance, inorganic nutrients, LTER-PIE, nitrogen export, rivers}, doi = {10.1002/2014JG002763}, author = {Yang, Q. and Tian, H. and Friedrichs, M.A.M. and Hopkinson, C.S. and Lu, C. and Najjar, R.G.} } @article {PIE368, title = {Animating the Carbon Cycle}, journal = {Ecosystems}, volume = {17}, number = {2}, year = {2014}, note = {PI Synthesis}, pages = {344-359}, keywords = {animal management, animal mediation, biogeochemical cycling, carbon budgets, carbon cycling, LTER-PIE, organic matter, population dynamics}, doi = {10.1007/s10021-013-9715-7}, author = {Schmitz, O.J. and Raymond, P. A. and Estes, J.A. and Kurz, W.A. and Holtgrieve, G.W. and Ritchie, M.E. and Schindler, D.E. and Spivak, A.C. and Wilson, R.W. and Bradford, M.A. and Christensen, V. and Deegan, L. and Smetacek, V. and Vanni, M.J. and Wilmers, C.C.} } @article {PIE360, title = {Assessing the homogenization of urban land management with an application to US residential lawn care.}, journal = {Proceedings of the National Academy of Sciences}, volume = {111}, year = {2014}, note = {PI Plum Data}, pages = {4432-4437}, keywords = {disturbance, land-change science, LTER-PIE, private land management, sustainability science, urban ecology}, doi = {10.1073/pnas.1323995111}, author = {Polsky, C. and Grove, J.M. and Knudson, C. and Groffman, P.M. and Bettez, N.D. and Canvender-Bares, J. and Hall, S.J. and Heffernan, J.B. and Hobbie, S.E. and Larson, K.L. and Morse, J.L. and Neill, C. and Nelson, K.C. and Ogden, L.A. and O{\textquoteright}Neil-Dunne, J. and Pataki,D.E. and Roy Chowdury, R. and Steele, M.} } @article {PIE361, title = {Convergent Surface Water Distributions in U.S. Cities}, journal = {Ecosystems}, year = {2014}, note = {PI Plum Data}, keywords = {cities, convergence, disturbance, hydrography, LTER-PIE, surface water, urban streams, urban water bodies, urbanization}, doi = {10.1007/s10021-014-9751-y}, author = {Steele, M.K. and Heffernan, J.B. and Bettez, N.D. and Cavender-Bares, J. and Groffman, P.M. and Grove, J.M. and Hall, S. and Hobbie, S.E. and Larson, K. and Morse, J.L. and Neill, C. and Nelson, K.C. and O{\textquoteright}Neil-Dunne, J. and Ogden, L and Pataki, D.E. and Polsky, C. and Roy Chowdury, R.} } @article {PIE347, title = {Ecological Homogenization of Urban America}, journal = {Frontiers in Ecology and Environment}, year = {2014}, note = {PI Synthesis}, pages = {74-81}, keywords = {LTER-PIE, plant communities, population dynamics, urbanization}, doi = {10.1890/120374}, author = {Groffman, P.M. and Cavender-Bares, J. and Bettez, N.D. and Grove, J.M. and Hall, S.J. and Heffernan, J.B. and Hobbie. S.E. and Larson, K.L. and Morse, J.L. and Neill, C. and Nelson, K. and O{\textquoteright}Neill-Dunne, J. and Ogden, L. and Pataki, D.E. and Polsky, C. and Chowdhury, R.R. and Steele, M.K.} } @article {PIE367, title = {The Lotic Intersite Nitrogen Experiments: an example of successful ecological research collaboration.}, journal = {Freshwater Science}, volume = {33}, number = {3}, year = {2014}, note = {PI Synthesis}, pages = {700-710}, keywords = {disturbance, inorganic nitrogen, LTER-PIE, nutrient enrichment, organic matter, streams}, doi = {10.1086/676938}, author = {Dodds, W.K. and Webster, J. R. and Crenshaw, C. and Helton, A.M. and O{\textquoteright}Brien, J.M. and Marti, E. and Hershey, A.E. and Tank, J.L. and Burgin, A.J. and Grimm, N.B. and Hamilton, S.K. and Sobota, D.J. and Poole, G.C. and Beaulieu, J. J. and Johnson, L.T. and Ashkenas, L.R. and Hall Jr., R.A. and Johnson, S.L. and Wollheim, W.M. and Bowden, W.B.} } @article {PIE372, title = {Nitrate uptake dynamics of surface transient storage in channels and fluvial wetlands.}, journal = {Biogeochemistry}, volume = {120}, year = {2014}, note = {PI Plum Data}, pages = {239-257}, keywords = {denitrification, efficiency loss, fluvial wetlands, inorganic nutrients, LTER-PIE, nitrogen cycling, river network, transient storage zones}, doi = {10.1007/s10533-014-9993-y}, author = {Wollheim, W.M. and Harms, T.K. and Peterson, B.J. and Morkeski, K. and Hopkinson, C.S. and Stewart, R.J. and Gooseff, M.N. and Briggs, M.A.} } @article {PIE369, title = {Saltmarsh pool and tidal creek morphodynamics: Dynamic equilibrium of northern latitude saltmarshes?}, journal = {Geomorphology}, year = {2014}, note = {PI Plum Data}, pages = {99-115}, keywords = {anthropogenic alteration, disturbance, LTER-PIE, saltmarsh ditches, saltmarsh pools, sea-level, tidal creeks, vertical accretion}, doi = {10.1016/j.geomorph.2014.01.002}, author = {Wilson, C.A. and Hughes, Z.J. and FitzGerald, D.M. and Hopkinson, C.S. and Valentine, V. and Kolker, A.S.} } @inbook {PIE327, title = {Use of receding horizon optimal control to solve MaxEP-based biogeochemistry problems}, booktitle = {Beyond the Second Law: Entropy Production and Non-Equilibrium Systems}, year = {2014}, note = {PI Plum Data}, pages = {337-359}, publisher = {Springer}, organization = {Springer}, keywords = {complex systems, complexity, disturbance, entropy production, inorganic nutrients, LTER-PIE, non-equilibrium systems, organic matter, population dynamics}, doi = {10.1007/978-3-642-40154-1_18.}, author = {Vallino, J.J. and Algar, C.K. and Fernandez Gonzales, N. and Huber, J.A.}, editor = {Dewar, R.C. and Lineweaver, C.H. and Niven, R.K. and Regenauer-Lieb, K.} } @article {PIE389, title = {Using Fine Resolution Orthoimagery and Spatial Interpolation to Rapidly Map Turf Grass in Suburban Massachusetts}, journal = {International Journal of Geospatial and Environmental Research }, volume = {1}, number = {1}, year = {2014}, note = {PI Plum Data}, keywords = {disturbance, interpolation, LTER-PIE, object-based image analysis, suburbanization, Turf grass}, author = {Runfola, D.M. and Hamill, T.A. and Pontius, R.G., Jr. and Rogan, J. and Giner, N. and Decatur, A. and Ratick, S.} } @article {PIE325, title = {Causes and Consequences of Ecosystem Service Regionalization in a Coastal Suburban Watershed}, journal = {Estuaries and Coasts}, year = {2013}, note = {PI Plum Data}, keywords = {disturbance, ecosystem services, historical, inorganic nutrients, LTER-PIE, nitrogen regulation, regionalization, sources, water supply, watersheds}, doi = {10.1007/s12237-013-9646-8}, author = {Wollheim, W.M. and Green, M.B. and Pellerin, B.A. and Morse, N.B. and Hopkinson, C.S.} } @article {PIE356, title = {The changing carbon cycle of the coastal ocean.}, journal = {Nature}, volume = {504}, year = {2013}, note = {PI Synthesis}, pages = {61-70}, keywords = {carbon budget, coasts, disturbance, estuaries, LTER-PIE, organic matter, riverine carbon flux}, doi = {10.1038/nature12857}, author = {Bauer, J.E. and Cai, W-J. and Raymond, P. A. and Bianchi, T.S. and Hopkinson, C.S. and Regnier, P.A.G.} } @inbook {PIE300, title = {Ecogeomorphology of Salt Marshes}, booktitle = {Treatise on Geomorphology}, volume = {12}, year = {2013}, note = {PI Plum Data}, pages = {180-200}, publisher = {Elsevier}, organization = {Elsevier}, keywords = {disturbance, geomorphology, LTER-PIE, nutrients, salt marsh}, author = {Fagherazzi, S. and FitzGerald, D.M. and Fulweiler, R.W. and Hughes, Z. and Wiberg, P.L. and McGlathery, K.J. and Morris, J.T. and Tolhurst, T.J. and Deegan, L.A. and Johnson, D.S.}, editor = {Shroder, J. and Butler, D. and Hubb, C.} } @inbook {PIE301, title = {Ecogeomorphology of Tidal Flats}, booktitle = {Treatise on Geomorphology}, volume = {12}, year = {2013}, note = {PI Plum Data}, pages = {201-220}, publisher = {Elsevier}, organization = {Elsevier}, keywords = {disturbance, estuary, geomorphology, LTER-PIE, tidal flats}, author = {Fagherazzi, S. and FitzGerald, D.M. and Fulweiler, R.W. and Hughes, Z. and Wiberg, P.L. and McGlathery, K.J. and Morris, J.T. and Tolhurst, T.J. and Deegan, L.A. and Johnson, D.S.}, editor = {Shroder, J. and Butler, D. and Hubb, C.} } @article {PIE341, title = { Ecosystem metabolism and nutrient uptake in an urban, piped headwater stream}, journal = {Biogeochemistry}, year = {2013}, note = {PI Plum Data}, keywords = {inorganic nutrients, LTER-PIE, metabolism, organic matter, stream, urban}, doi = {10.1007/s10533-013-9900-y}, author = {Hope, A.J. and McDowell, W.H. and Wollheim, W.M.} } @article {, title = {History of nutrient inputs to the Northeastern United States, 1930-2000.}, journal = {Global Biogeochemical Cycles}, volume = {27}, number = {2}, year = {2013}, note = {PI Data}, pages = {578-591}, keywords = {anthropogenic, disturbance, inorganic nutrients, LTER-PIE, Northeast United States, nutrient inputs}, doi = {10.1002/gbc.20049}, author = {Hale, R.L. and Hoover, J.H. and Wollheim, W.M. and Vorosmarty, C.J.} } @article {PIE346, title = { Microbes in nature are limited by carbon and energy: the starving-survival lifestyle in soil and consequences for estimating microbial rates}, journal = {Frontiers in Terrestrial Microbiology}, year = {2013}, note = {PI Synthesis}, keywords = {LTER-PIE, microbial metabolism, organic matter, soils}, doi = {10.3389/fmicb.2013.00324}, author = {Hobbie, J.E. and Hobbie, E.A.} } @article {PIE320, title = {The roles of large top predators in coastal ecosystems: new insights from Long-Term Ecological Research. }, journal = {Oceanography}, volume = {26}, number = {3}, year = {2013}, note = {PI Plum Data}, pages = {156-167}, keywords = {bottom-up control, competition, disturbance, LTER-PIE, population dynamics, pulse and press disturbance, top-down control}, doi = {10.5670/oceanog.2013.59}, author = {Rosenblatt, A. and Heithaus, M.R. and Mather, M.E. and Matich, P. and Nifong, J.C. and Ripple, W.J. and Silliman, B.R.} } @article {PIE331, title = {Salt marsh primary production and its responses to relative sea level and nutrients}, journal = {Oceanography}, volume = {26}, number = {3}, year = {2013}, note = {PI Plum Data}, pages = {78-84}, keywords = {disturbance, inorganic nutrients, LTER-PIE, primary production, salt marshes, sea level}, doi = {10.5670/oceanog.2013.48}, author = {Morris, J.T. and Sundberg, K. and Hopkinson, C.S.} } @inbook {PIE303, title = {Assessment of Carbon Sequestration Potential in Coastal Wetlands.}, booktitle = {Recarbonization of the Bioshpere: Ecosystem and Global Carbon Cycle. }, year = {2012}, note = {PI Plum Data}, pages = {517-531}, publisher = {Springer}, organization = {Springer}, keywords = {anthropogenic disturbance, autochthonous, carbon sequestration, carbon stocks, coastal ecosystems, coastal wetlands, digital elevation model, diking, disturbance, drainage, holocene, LTER-PIE, mangroves, marsh equilibrium model, organic matter, organic rich soil, primary production, sea level rise, subsidence, suspended solids, tidal amplitude, tidal marshes, tide range}, doi = {10.1007/978-94-007-4159-1_24}, author = {Morris, J.T. and Edwards, J. and Crooks, S. and Reyes, E.}, editor = {Lal, R. and Lorenz, K. and H{\"u}ttl, R. and Schneider, B.U. and von Braun, J.} } @article {PIE289, title = {Beyond {\textquoteright}Lawn People{\textquoteright}: The role of emotions in suburban yard management practices}, journal = {The Professional Geographer}, year = {2012}, note = {PI Plum Data}, keywords = {disturbance, emotion, land use, lawn, LTER-PIE, Massachusetts, primary production, suburbs, yard}, doi = {10.1080/00330124.2012.681586}, author = {Harris, E.M. and Martin, D.G. and Polsky, C. and Denhardt, L. and Nehring, A.} } @article {PIE343, title = {Carbon sequestration in wetland dominated coastal systems {\textemdash} a global sink of rapidly diminishing magnitude}, journal = {Current Opinion in Environmental Sustainability}, volume = {4}, number = {2}, year = {2012}, note = {PI Plum Data}, pages = {186 - 194}, keywords = {carbon sequestration, vegetated coastal systems, climate change, disturbance, LTER-PIE, organic matter, sea level rise}, doi = {10.1016/j.cosust.2012.03.005}, author = {Hopkinson, C.S. and Cai, W-J. and Hu, X.} } @article {PIE316, title = {Heterogeneity in Residential Yard Care: Evidence from Boston, Miami, and Phoenix.}, journal = {Human Ecology}, volume = {40}, number = {5}, year = {2012}, note = {PI Plum Data}, pages = {735-749}, keywords = {disturbance, heterogeneity, lawns, LTER-PIE, residential landscapes, United States, urban ecology, yard management}, doi = {10.1007/s10745-012-9514-3}, author = {Harris, E.M. and Polsky, C. and Larson, K. and Garvoille, R. and Martin, D.G. and Brumand, J. and Ogden, L.} } @article {PIE299, title = {Legacy effects material flux: structural catchment changes predate long-term studies.}, journal = {Bioscience}, volume = {62}, number = {6}, year = {2012}, note = {PI Plum Data}, pages = {575-584}, keywords = {inorganic nutrients, legacy effect, long-term studies, LTER-PIE, sedimentation, streams, structural and signal legacy effects}, doi = {10.1525/bio.2012.62.6.8}, author = {Bain, D. and Green, M.B. and Campbell, J. and Chamblee, J. and Fraterrigo, J. and Kaushal, S.S. and Martin, S. and Jordan, T. and Parolari, A. and Sobczak, W.V. and Weller, D.E. and Wollheim, W.M. and Boose, E. and Duncan, J. and Gettel, G. and Hall, B. and Kumar, P. and Thompson, J. and Vose, J. and Elliott, E. and Leigh, D.} } @article {PIE298, title = {Local scale carbon budgets and mitigation opportunities for the Northeastern United States.}, journal = {BioScience}, volume = {62}, year = {2012}, note = {PI Plum Data}, pages = {23-38}, keywords = {carbon, climate change, disturbance, energy, land use, LTER-PIE}, doi = {10.1525/bio.2012.62.1.7}, author = {Raciti, S. and Fahey, T. and Hall, B. and Driscoll, C. and Carranti, F.J. and Foster, D. and Gwyther, P.S. and Jenkins, J. and Hamburg, S. and Neill, C. and Ollinger, S. and Peery, B.W. and Quigley, E. and Sherman, R. and Thomas, R.Q. and Vadeboncoeur, T.M. and Weinstein, D. and Wilson, G. and Woodbury, P. and Yandik, W.} } @inbook {PIE304, title = {South Atlantic Tidal Wetlands}, booktitle = {Wetland Habitats of North America: Ecology and Conservation Concerns}, year = {2012}, note = {PI Plum Data}, pages = {45-61}, publisher = {University of California Press}, organization = {University of California Press}, address = {Berkeley, CA}, keywords = {ecology, LTER-PIE, salt marsh, tidal, wetland}, isbn = {9780520271647}, author = {Pennings, S. and Alber, M. and Alexander, C. and Booth, M. and Burd, A. and Cai, W-J. and Craft, C. and DePratter, C. and Di Iorio, D. and Hopkinson, C. and Joye, S. and Meile, C. and Moore, W. and Silliman, B. and Thompson, V. and Wares, J.}, editor = {Batzer, D.P. and Baldwin, A.} } @article {PIE379, title = {Surprises and insights from long term aquatic datasets and experiments.}, journal = {Bioscience}, volume = {62}, number = {8}, year = {2012}, note = {Grad}, pages = {709-721}, keywords = {data, disturbance, freshwater, inorganic nutrients, lakes, long term, LTER-PIE, population dynamics, streams}, doi = {10.1525/bio.2012.62.8.4}, author = {Dodds, W.K. and Robinson, C.T. and Gaiser, E.E. and Hansen, G.J.A. and Powell, H. and Smith, J.M. and Morse, N.B. and Johnson, S. and Gregory, S.V. and Bell, T. and Kratz, T.K. and McDowell, W.H.} } @article {PIE312, title = {Urban Geochemistry: Hotbeds of Biogeochemical Diversity: Insights from Urban Long-Term Ecological Research Sites}, journal = {Elements}, volume = {8}, year = {2012}, note = {PI Plum Data}, pages = {435-438}, keywords = {climate variability, disturbance, inorganic nutrients, LTER, LTER-PIE, nitrogen retention, spatial heterogeneity, urban ecology}, doi = {10.2113/gselements.8.6.435}, author = {Bain, D.J. and Hale, R.L. and Wollheim, W.M.} } @article {PIE283, title = {The ebb and flood of silica: Quantifying dissolved and biogenic silica fluxes from a temperate salt marsh}, journal = {Estuarine, Coastal and Shelf Science}, volume = {95}, year = {2011}, note = {Collab Plum Data}, pages = {415-423}, keywords = {biogenic silica, diatoms, dissolved silica, inorganic nutrients, LTER-PIE, nutrient cycles, primary production, salt marshes}, doi = {10.1016/j.ecss.2011.10.012}, author = {Vieillard, A., and R.W. Fulweiler, R.W. and Hughes, Z. and Carey, J.} } @inbook {PIE344, title = {Ecosystem Metabolism}, booktitle = {Estuarine Ecology}, volume = {2}, year = {2011}, note = {PI Synthesis}, pages = {381 - 416}, publisher = {John Wiley and Sons, Inc.}, organization = {John Wiley and Sons, Inc.}, chapter = {15}, address = {Hoboken, NJ}, keywords = {ecosystem metabolism, estuaries, LTER-PIE, organic matter, oxygen, carbon dioxide, primary production}, doi = {10.1002/9781118412787.ch15}, author = {Testa, J.M. and Kemp, W.M. and Hopkinson, C.S. and Smith, S.V.}, editor = {Day, J.W. and Crump, B.C. and Kemp, W.M. and Yanez-Arancibia, A.} } @article {PIE267, title = {Microbial community composition in salt marsh sediments resists perturbation by nutrient enrichment}, journal = {The ISME Journal}, volume = {5}, year = {2011}, note = {PI Plum Data}, pages = {1540-1548}, keywords = {denitrification, disturbance, estuaries, eutrophication, inorganic nitrogen, LTER-PIE, microbes, nirS, population dynamics, resistance, salt marsh}, doi = {10.1038/ismej.2011.22}, author = {Bowen, J.L. and Ward, B.B. and Morrison, H.G. and Hobbie, J.E. and Valiela, I. and Deegan, L.A. and Sogin, M.L.} } @article {, title = {Nitrous oxide emission from denitrification in stream and river networks}, journal = {Proceedings of the National Academy of Science}, volume = {108}, year = {2011}, note = {PI Plum Data}, pages = {214-219}, keywords = {inorganic nitrogen, LTER-PIE, nitrous oxide, streams}, doi = {210.1073/pnas.1011464108}, author = {Beaulieu, J. J. and Tank, J.L. and Hamilton, S. K. and Wollheim, W. and Hall, R. and Mulholland, P. and Peterson, B. and Ashkenas, L. and Cooper, L. and Dahm, C. and Dodds, W. and Grimm, N. and Johnson, S. and McDowell, W. and Poole, G. and Valett, H. and Arango, C. and Bernot, M. and Burgin, A. and Crenshaw, C. and Helton, A. and Johnson, L. and O{\textquoteright}Brien, J. and Potter, J. and Sheibley, D. and Sobota, D. and Thomas, S.} } @article {PIE273, title = {Research on coupled human and natural Systems (CHANS): Approach, challenges and strategies}, journal = {Bulletin of the Ecological Society of America}, volume = {92}, number = {2}, year = {2011}, note = {PI Plum Data}, pages = {218-228}, keywords = {CHANS, disturbance, LTER-PIE, population dynamics}, doi = {10.1890/0012-9623-92.2.218}, author = {McConnell, W.J. and Millington, J.D.A. and Reo, N.J. and Alberti, M. and Asbjornsen, H. and Baker, L.A. and Brozovi{\'c}, N. and Drinkwater, L.E. and Drzyzga, S.A. and Fragoso, J. and Holland, D.S. and Jantz, C.A. and Kohler, T.A. and Maschner, H.D.G. and Monticino, M. and Podest{\'a}, G. and Pontius, R.G., Jr. and Redman, C.L. and Sailor, D. and Urquhart, G. and Liu, Jianguo} } @article {PIE270, title = {Residence time distribution in surface transient storage zones in streams: Estimation via signal deconvolution}, journal = {Water Resources Research}, volume = {47}, number = {W05509}, year = {2011}, note = {PI Plum Data}, pages = {7 pp}, keywords = {disturbance, hydrology, LTER-PIE, residence time, streams}, doi = {10.1029/2010WR009959}, author = {Gooseff, M. and Benson, D.A. and Briggs, M.A. and Weaver, M. and Wollheim, W.M. and Peterson, B.J. and Hopkinson, C.S.} } @article {PIE292, title = {Separation of river network scale nitrogen removal among main channel and two transient storage compartments}, journal = {Water Resources Research}, volume = {47}, year = {2011}, note = {PI Plum Data}, keywords = {LTER-PIE, nitrogen removal, nutrients, river network, transient storage}, doi = {10.1029/2010WR009896}, author = {Stewart, R.J. and Wollheim, W.M. and Gooseff, M. and Briggs, M.A. and Jacobs, J.M. and Peterson, B.J. and Hopkinson, C.S.} } @mastersthesis {PIE271, title = {Spatial methods to predict land cover}, volume = {MS Degree}, year = {2011}, note = {Grad}, school = {Clark University}, type = {mastersthesis}, address = {Worcester, MA}, keywords = {disturbance, geospatial modeling, land cover, LTER-PIE}, author = {Hamill, T.} } @article {PIE272, title = {Thinking outside the channel: Modeling nitrogen cycling in networked river ecosystems}, journal = {Frontiers in Ecology and Environment}, volume = {9}, year = {2011}, note = {PI Plum Data}, pages = {229-238}, keywords = {inorganic nitrogen, LTER-PIE, nitrogen cycling modeling, rivers}, doi = {10.1890/080211}, author = {Helton, A.M. and Poole, G.C. and Meyer, J.L. and Wollheim, W.M. and Peterson, B.J. and Mulholland, P.J. and Bernhardt, E.S. and Stanford, J.A. and Arango, C. and Ashkenas, L.R. and Cooper, L.W. and Dodds, W.K. and Gregory, S.V. and Hall, R.O. and Hamilton, S.K. and Johnson, S.L. and McDowell, W.H. and Potter, J.D. and Tank, J.L. and Thomas, S.M. and Valett, H.M. and Webster, J.R. and Zeglin, L.} } @article {PIE246, title = {The effects of salinity on nitrogen losses from an oligohaline estuarine sediment}, journal = {Estuaries and Coasts}, volume = {33}, year = {2010}, note = {PI Plum Data}, pages = {1054-1068}, keywords = {ammonium, benthic fluxes, benthic respiration, denitrification, disturbance, DNRA, estuaries, inorganic nutrients, LTER-PIE, sediments}, doi = {10.1007/s12237-010-9280-7}, author = {Giblin, A.E. and Weston, N.B. and Banta, G.T. and Tucker, J. and Hopkinson, C.S.} } @article {PIE245, title = {The effects of varying salinity on ammonium exchange in estuarine sediments of the Parker River, Massachusetts.}, journal = {Estuaries and Coasts}, volume = {33}, year = {2010}, note = {PI Plum Data}, pages = {985-1003}, keywords = {adsorption, ammonium exchange, disturbance, estuaries, inorganic nutrients, LTER-PIE, Parker River estuary, salinity, sediments}, doi = {10.1007/s12237-010-9282-5}, author = {Weston, N.B. and Giblin, A.E. and Banta, G. and Hopkinson, C.S. and Tucker, J.} } @article {PIE257, title = {Salt marsh geomorphological analyses via integration of multi-temporal multispectral remote sensing with LIDAR and GIS.}, journal = {Journal of Coastal Research}, volume = {26}, year = {2010}, note = {PI Plum Data}, pages = {809-816}, keywords = {disturbance, ecogeomorphology, geomophology, geoprocessing, GIS, LiDAR, LTER-PIE, New England, organic matter, remote sensing, salt marsh}, doi = {10.2112/JCOASTRES-D-09-00101.1}, author = {Millette, T.L. and Argow, B. and Marcano, E. and Hayward, C. and Hopkinson, C. and Valentine, V.} } @article {PIE248, title = {Surface and hyporheic transient storage dynamics throughout a coastal stream network.}, journal = {Water Resources Research}, volume = {46}, number = {W06516}, year = {2010}, note = {PI Plum Data}, keywords = {hyporheic zone, LTER-PIE, organic matter, stream network, transient storage, two storage zone model}, doi = {10.1029/2009WR008222}, author = {Briggs, M.A. and Gooseff, M.N. and Peterson, B.J. and Morkeski, K. and Wollheim, W.M. and Hopkinson, C.S.} } @thesis {PIE256, title = {Visualizing and computing land cover proportions}, volume = {Bachelor{\textquoteright}s Degree, High Honors}, year = {2010}, note = {Grad}, school = {Clark University}, type = {bachelorsthesis}, address = {Worcester, MA}, keywords = {disturbance, land cover, LTER-PIE}, author = {Hamill, T.} } @article {PIE264, title = {Wetland-estuarine-shelf interactions in the Plum Island Sound and Merrimack River in the Massachusetts coast}, journal = {Journal of Geophysical Research}, volume = {115}, number = {C10(C10039))}, year = {2010}, note = {PD Plum Data; PI Plum Data}, pages = {1-13}, keywords = {disturbance, estuaries, hydrodynamics, LTER-PIE}, doi = {10.1029/2009JC006085}, author = {Zhao, L. and Chen, C. and Vallino, J. and Hopkinson, C. and Beardsley, R.C. and Lin, H. and Lerczak, J.} } @article {PIE181, title = {Dynamic modeling of nitrogen losses in river networks unravels the coupled effects of hydrological and biogeochemical processes}, journal = {Biogeochemistry}, volume = {93}, year = {2009}, note = {PI Synthesis}, pages = {91-116}, keywords = {anthropogenic nitrogen, denitrification, inorganic nutrients, LINX, LTER-PIE, NHD river network, nitrate loss, nitrate model, nitrate removal efficiency, seasonal}, doi = {10.1007/s10533-008-9274-8}, author = {Alexander, R.B. and Bohlke, J.F. and Boyer, E.W. and David, M. and Harvey, J.W. and Mulholland, P.J. and Seitzinger, S.P. and Tobias, C.R. and Tonitto, C. and Wollheim, W.M.} } @article {PIE185, title = {Effects of regular salt marsh haying on marsh plants, algae, invertebrates and birds at Plum Island Sound, Massachusetts}, journal = {Wetlands Ecology and Management}, volume = {17}, year = {2009}, note = {PI Plum Data}, pages = {469-487}, keywords = {coastal wetlands, disturbance, haying, LTER-PIE, Orchestia, organic matter, primary production, salt marsh, shorebirds, Spartina, stable isotopes}, doi = {10.1007/s11273-008-9125-3}, author = {Buchsbaum, R.N. and Deegan, L.A. and Horowitz, J. and Garritt, R.H. and Ludlam, J.P. and Shull, D. H.} } @article {PIE188, title = {Examining mummichog growth and movement: Are some individuals making intra-season migrations to optimize growth?}, journal = {Journal of Experimental Marine Biology and Ecology}, volume = {369}, year = {2009}, note = {PD Plum Data}, pages = {8-16}, keywords = {animal movement, estuary, Fundulus heteroclitus, LTER-PIE, mummichogs, population dynamics, stable isotopes}, doi = {10.1016/j.jembe.2008.09.027}, author = {Haas, H.L. and Freeman, C.J. and Logan, J.M. and Deegan, L and Gaines, E.F.} } @article {PIE212, title = {Impact of the dynamic feedback between sedimentation, sea level rise, and biomass production on near surface marsh stratigraphy and carbon accumulation}, journal = {Estuarine, Coastal and Shelf Science}, volume = {82}, year = {2009}, note = {PI Synthesis}, pages = {377-389}, keywords = {accretion, belowground biomass, carbon storage, disturbance, LTER-PIE, organic matter, organic sediments, primary production, salt marsh, sea-level rise}, doi = {10.1016/j.ecss.2009.01.028}, author = {Mudd, S.M. and Howell, S. and Morris, J.T.} } @article {PIE209, title = {Increased supply of ambient nitrogen has minimal effect on salt marsh bacterial production}, journal = {Limnology and Oceanography }, volume = {54}, number = {3}, year = {2009}, note = {PI Plum Data}, pages = {713 - 722}, keywords = {bacterial production, disturbance, inorganic nutrients, LTER-PIE, nitrogen, salt marsh}, doi = {10.4319/lo.2009.54.3.0713}, author = {Bowen, J.L. and Crump, B.C. and Deegan, L.A. and Hobbie, J.E.} } @article {PIE235, title = {The Long-Term Ecological Research community metadata standardisation project: a progress report.}, journal = {International Journal of Metadata, Semantics and Ontologies}, volume = {4}, number = {3}, year = {2009}, note = {Collab Plum Data}, pages = {141-153}, keywords = {ecological metadata language, EML, LTER-IMC, LTER-PIE, metadata, metadata management, standardisation}, doi = {10.1504/IJMSO.2009.027750}, author = {San Gil, I. and Baker, K. and Campbell, J. and Denny, E.G. and Vanderbilt, K. and Riordan, B. and Koskela, R. and Downing, J. and Grabner, S. and Melendez, E. and Walsh, J.M. and Kortz, M. and Conners, J. and Yarmey, L. and Kaplan, N. and Boose, E.R. and Powell, L. and Gries, C. and Schroeder, R. and Ackerman, T. and Ramsey, K. and Benson, B. and Chipman, J. and Laundre, J. and Garritt, H. and Henshaw, D. and Collins, B. and Gardner, C. and Bohm, S. and O{\textquoteright}Brien, M. and Gao, J. and Sheldon, W. and Lyon, S. and Bahauddin, D. and Servilla, M. and Costa, D. and Brunt, J.} } @inbook {PIE288, title = {The Mounting Risk of Drought in a Humid Landscape: Structure and Agency in Suburbanizing Massachusetts. }, booktitle = {Sustainable Communities on a Sustainable Planet: The Human-Environment Regional Observatory Project}, year = {2009}, note = {PI Plum Data}, publisher = {Cambridge University Press}, organization = {Cambridge University Press}, address = {New York}, keywords = {disturbance, drought, land use, LTER-PIE, suburbia}, doi = {10.1017/CBO9780511635694.011}, author = {Polsky, C. and Assefa, S. and Del Vecchio, K. and Hill, T. and Merner, L. and Tercero, I. and Pontius, R.G., Jr.}, editor = {Yarnal, B. and Polsky, C. and O{\textquoteright}Brien, J.} } @article {PIE182, title = {The regional and global significance of reactive N removal in lakes and reservoirs}, journal = {Biogeochemistry}, volume = {93}, year = {2009}, note = {PI Synthesis}, pages = {147-158}, keywords = {denitrification, global limnology, inorganic nutrients, lakes, LTER-PIE, nitrogen, nitrogen removal, resevoirs}, doi = {10.1007/s10533-008-9272-x}, author = {Harrison, J. and Maranger, R. and Alexander, R.B. and Cornwell, J. and Giblin, A. and Jacinthe, P. and Mayorga, E. and Seitzinger, S. and Wollheim, W.M.} } @article {PIE210, title = {Salt marsh ecosystem biogeochemical responses to nutrient enrichment: A paired 15N tracer study.}, journal = {Ecology}, volume = {90}, number = {9}, year = {2009}, note = {PD Plum Data}, pages = {2535-2546}, keywords = {biogeochemistry, disturbance, eutrophication, inorganic nutrients, LTER-PIE, New England, nitrogen processing efficiency, organic matter, primary production, salt marsh, stable isotopes, USA}, doi = {10.1890/08-1051.1}, author = {Drake, D.C. and Peterson, B.J. and Galv{\'a}n, K.A. and Deegan, L.A. and Fleeger, J.W. and Hopkinson, C. and Johnson, J.M. and Koop-Jakobsen, K. and Lemay, L.E. and Miller, E.E. and Picard, C. and Warren, R.S.} } @article {PIE169, title = {Salt marsh sediment bacteria: their distribution and response to external nutrient inputs}, journal = {The ISME Journal}, volume = {3}, year = {2009}, note = {PI Plum Data}, pages = {924 - 934}, keywords = {bacteria, disturbance, inorganic nutrients, LTER-PIE, nitrogen, salt marsh}, doi = {10.1038/ismej.2009.44}, author = {Bowen, J.L. and Crump, B.C. and Deegan, L.A. and Hobbie, J.E.} } @article {PIE197, title = {Biophysical controls on organic carbon fluxes in fluvial networks}, journal = {Nature Geoscience}, volume = {1}, year = {2008}, note = {PI Synthesis}, pages = {95-100}, keywords = {ecosystem metabolism, estuaries, fluvial networks, heterotrophy, inorganic nutrients, LTER-PIE, organic matter, primary production, rivers}, doi = {10.1038/ngeo101}, author = {Battin, T.J. and Kaplan, L. and Findlay, S. and Hopkinson, C. and Marti, E. and Packman, A. and Newbold, J.D. and Sabater, F.} } @article {PIE189, title = {Defining Linkages between the GSC and NSF{\textquoteright}s LTER Program: How the Ecological Metadata Language (EML) Relates to GCDML and Other Outcomes}, journal = {Omics}, volume = {12}, year = {2008}, note = {PI Plum Data}, pages = {151-156}, keywords = {Genomic Standards Consortium, genomics, LTER-IMC, LTER-PIE, metadata, population dynamics}, doi = {10.1089/omi.2008.0015}, author = {San Gil, I. and Sheldon, W. and Schmidt, T. and Servilaa, M. and Aguilar, R. and Gries, C. and Gray, T. and Field, D. and Cole, J. and Yun Pan, J. and Palanisamy, G. and Henshaw, D. and O{\textquoteright}Brien, M. and Kinkel, L. and McMahon, K. and Kottman, R. and Amaral-Zettler, L. and Hobbie, J. and Goldstein, P. and Guralnick, R.P. and Brunt, J. and Michener, W.K.} } @article {PIE184, title = {Dynamics of N removal over annual time scales in a suburban river network}, journal = {Journal of Geophysical Research-Biogeosciences}, volume = {113}, year = {2008}, note = {PI Plum Data}, keywords = {disturbance, inorganic nutrients, LTER-PIE, nitrogen removal, watershed}, doi = {10.1029/2007JG000660}, author = {Wollheim, W.M. and Peterson, B.J. and Vorosmarty, C. and Hopkinson, C. and Thomas, S.A.} } @article {PIE180, title = {Global N removal by freshwater aquatic systems A spatially distributed, within-basin approach}, journal = {Global Biogeochemical Cycles}, volume = {22}, year = {2008}, note = {PI Plum Data}, keywords = {disturbance, inorganic nitrogen, LTER-PIE, nitrogen removal, watershed}, doi = {10.1029/2007GB002963}, author = {Wollheim, W.M. and Vorosmarty, C.J. and Bouwman, A.F. and Green, P.A. and Harrison, J. and Linder, E. and Peterson, B.J. and Green, P.A. and Seitzinger, S. and Syvitski, J.P.M.} } @article {PIE178, title = {Land change: Ecosystem responses to urbanization and pollution across climatic and societal gradients}, journal = {Frontiers in Ecology and Environment}, volume = {6}, number = {5}, year = {2008}, note = {PI Synthesis}, pages = {264-272}, keywords = {climate change, disturbance, ecosystems, inorganic nutrients, land use, LTER-PIE, population dynamics}, doi = {10.1890/070147}, author = {Grimm, N. and Foster, D. and Groffman, P. and Grove, M. and Hopkinson, C. and Nadelhoffer, K. and Pataki, D. and Peters, D.} } @inbook {PIE172, title = {Nitrogen Dynamics of Coastal Salt Marshes}, booktitle = {Nitrogen in the Marine Environment, 2nd Edition}, year = {2008}, note = {PI Plum Data}, pages = {991-1036}, publisher = {Elsevier Publishers}, organization = {Elsevier Publishers}, chapter = {22}, keywords = {inorganic nutrients, LTER-PIE, nitrogen, organic matter, salt marsh}, isbn = {9780123725226}, author = {Hopkinson, C. and Giblin, A.}, editor = {Capone, R. and Bronk, D. and Mulholland, M. and Carpenter, E.} } @article {PIE173, title = {Plant nitrogen dynamics in fertilized and natural New England saltmarshes: a paired 15N tracer study}, journal = {Marine Ecology Progress Series}, volume = {354}, year = {2008}, note = {PD Plum Data}, pages = {35-46}, keywords = {eutrophication, inorganic nitrogen, LTER-PIE, marsh ecosystem, nitrogen cycling, nitrogen isotopes, organic matter, plant ecophysiology, primary production, Spartina alterniflora, Spartina patens}, doi = {10.3354/meps07170}, author = {Drake, D.C. and Peterson, B.J. and Deegan, L.A. and Harris, L.A. and Miller, E.E. and Warren, R.S.} } @article {PIE200, title = {Stable isotope monitoring of benthic-pelagic coupling with salt marsh fish}, journal = {Marine Ecology Progress Series}, volume = {369}, year = {2008}, note = {PI Plum Data}, pages = {193-204}, keywords = {benthic microalgae, fish, LTER-PIE, monitoring, organic matter, population dynamics, power analysis, salt marsh, Spartina, stable isotope analysis}, doi = {10.3354/meps07644}, author = {Fry, B. and Cieri, M. and Hughes, J. and Tobias, C. and Deegan, L.A. and Peterson, B.} } @article {PIE190, title = {Stream denitrification across biomes and its response to anthropogenic nitrate loading}, journal = {Nature}, volume = {452}, year = {2008}, note = {PI Plum Data}, pages = {202-206}, keywords = {denitrification, disturbance, inorganic nutrients, LTER-PIE, nitrogen, nitrogen isotopes, stream network}, doi = {10.1038/nature06686}, author = {Mulholland, P. J. and Helton, A. M. and Poole, G.C. and Hall, Jr., R.O. and Hamilton, S. K. and Peterson, B. J. and Tank, J.L. and Ashkenas, L.R. and Cooper, L. W. and Dahm, C. N. and Dodds, W. K. and Findlay, S. E. G. and Gregory, S. V. and Grimm, N.B. and Johnson, S. L. and McDowell, W.H. and Meyer, J. L. and Valett, H. M. and Webster, J. R. and Arango, C. P. and Beaulieu, J. J. and Bernot, M. J. and Burgin, A. J. and Crenshaw, C. L. and Johnson, L.T. and Niederlehner, B. R. and OメBrien, J. M. and Potter, J. D. and Sheibley, R.W. and Sobota, D. J. and Thomas, S. M.} } @article {PIE179, title = {Understanding and forecasting the effects of sea level rise and intense windstorms on coastal and upland ecosystems: the need for a continental-scale netowrk of observatories}, journal = {Frontiers in Ecology and Environment}, volume = {6}, number = {5}, year = {2008}, note = {PI Synthesis}, pages = {255-263}, keywords = {climate change, disturbance, ecosystem services, land use, LTER-PIE, population dynamics, sea-level}, doi = {10.1890/070153}, author = {Hopkinson, C.S. and Lugo, A.E. and Alber, M. and Covich, A. and van Bloem, S.} } @article {PIE265, title = {Development and drought in suburbia: A mixed methods rapid assessment of vulnerability to drought in rainy Massachusetts. }, journal = {Environmental Hazards: Human and Policy Dimensions}, volume = {7}, year = {2007}, note = {Collab}, pages = {291-301}, keywords = {disturbance, drought, land use, LTER-PIE, suburbia}, doi = {10.1016/j.envhaz.2007.08.003}, author = {Hill, T. and Polsky, C.} } @article {PIE230, title = {Environmental turbulent mixing controls on air-water gas exchange in marine and aquatic systems}, journal = {Geophysical Research Letters}, volume = {34}, year = {2007}, note = {PD Plum Data}, keywords = {diffusion, estuaries, gas transfer, LTER-PIE, oxygen, carbon dioxide, rivers}, doi = {10.1029/2006GL028790}, author = {Zappa, C.J. and McGillis, W.R. and Raymond, P.A. and Edson, J.B. and Hintsa, E.J. and Zemmelink, H.J. and Dacey, J.W.H. and Ho, D.T.} } @article {PIE236, title = {Susceptibility of salt marshes to nutrient enrichment and predator removal}, journal = {Ecological Applications}, volume = {17}, number = {5}, year = {2007}, note = {PI Plum Data}, pages = {S-42-S63}, keywords = {bottom-up, disturbance, eutrophication, Fundulus heteroclitus, inorganic nutrients, LTER-PIE, multiple stressors, nutrient loading, organic matter, population dynamics, primary production, salt marsh, Spartina alterniflora, Spartina patens, species change, top-down control}, doi = {10.1890/06-0452.1}, author = {Deegan, L.A. and Bowen, J.L. and Drake, D.C. and Fleeger, J.W. and Friedrichs, C.T. and Galv{\'a}n, K.A. and Hobbie, J.E. and Hopkinson, C. and Johnson, D.S. and Johnson, J.M. and Lemay, L.E. and Miller, E.E. and Peterson, B.J. and Picard, C. and Sheldon, S. and Sutherland, M. and Vallino, J. and Warren, R.S.} } @article {, title = {Allometric laws and prediction in estuarine and coastal ecology (Invited essay Perspectives section)}, journal = {Estuaries and Coasts}, volume = {29}, year = {2006}, note = {PD Plum Data}, pages = {340-344}, keywords = {allometry, estuary, LTER-PIE, metabolic theory of ecology, prediction}, doi = {10.1007/BF02782002}, author = {Harris, L.A. and Duarte, C.M. and Nixon, S.W.} } @article {PIE232, title = {Effect of historical changes in land use and climate on the water budget of an urbanizing watershed}, journal = {Water Resources Research}, volume = {42}, year = {2006}, note = {PI Plum Data}, keywords = {climate change, disturbance, hydrology, land use, LTER-PIE, population dynamics, watershed}, doi = {10.1029/2005WR004131}, author = {Claessens, L. and Hopkinson, C. and Rastetter, E. and Vallino, J.} } @article {PIE239, title = {Linking ecology and economics for ecosystem management}, journal = {BioScience}, volume = {56}, year = {2006}, note = {PI Synthesis}, pages = {121-134}, keywords = {disturbance, ecosystem management, ecosystem services, LTER, LTER-PIE, trade-offs, valuation}, doi = {10.1641/0006-3568(2006)056[0121:LEAEFE]2.0.CO;2}, author = {Farber, S and Costanza, D. and Childers, D. and Erikson, J. and Gross, K. and Grove, M. and Hopkinson, C. and Kahn, J. and Pincetl, S. and Troy, A. and Warren, P. and Wilson, M.} } @article {PIE165, title = {Relationship between river size and nutrient removal.}, journal = {Geophysical Research Letters}, volume = {33}, year = {2006}, note = {PI Plum Data}, keywords = {hydrology, inorganic nutrients, LTER-PIE, nutrient removal}, doi = {10.1029/2006GL025845}, author = {Wollheim, W.M. and Vorosmarty, C.J. and Peterson, B.J. and Seitzinger, S.P. and Hopkinson, C.S.} } @article {PIE162, title = {The role of snowmelt and spring rainfall in inorganic nutrient fluxes from a large temperate watershed, the Androscoggin River basin (Maine and New Hampshire).}, journal = {Biogeochemistry}, volume = {80}, year = {2006}, note = {PI Coastal}, pages = {217-234}, keywords = {Androscoggin River, DIN, Freshet, LTER-PIE, nitrogen, nutrient, Snowmelt, Snowpack, watershed}, doi = {10.1007/s10533-006-9017-7}, author = {Oczkowski, A.J. and Pellerin, B.A. and Hunt, C.W. and Wollheim, W.M. and Vorosmarty, C.J. and Loder, T.C.} } @article {PIE171, title = {Salt marsh geomorphology: Physical and ecological effects on landform}, journal = {Estuarine, Coastal and Shelf Science}, volume = {69}, year = {2006}, note = {PI Plum Data}, pages = {309-310}, keywords = {disturbance, geomorphology, LTER-PIE, salt marsh}, doi = {10.1016/j.ecss.2006.05.001}, author = {Torres, R. and Fagherazzi, S. and van Proosdij, D. and Hopkinson, C.} } @article {PIE159, title = {Turnover rates of nitrogen stable isotopes in the salt marsh mummichog, Fundulus heteroclitus, following a laboratory diet switch.}, journal = {Oecologia}, volume = {147}, year = {2006}, note = {PI Plum Data}, pages = {391-395}, keywords = {15N, discrimination, liver, LTER-PIE, metabolism, population dynamics, trophic level}, doi = {10.1007/s00442-005-0277-z}, author = {Logan, J. and Hass, H. and Deegan, L.A. and Gaines, E.} } @article {PIE158, title = {Adaptation to Drought in the Context of Suburban Sprawl and Abundant Rainfall.}, journal = {Geographical Bulletin}, volume = {47}, year = {2005}, note = {Collab Plum Data}, pages = {85-100}, keywords = {drought, LTER-PIE, precipitation, urban sprawl}, doi = {10.1525/bio.2012.62.4.10}, author = {Hill, T. and Polsky, C.} } @article {PIE150, title = {Distribution of phosphatase activity in marsh sediments along an estuarine salinity gradient.}, journal = {Marine Ecological Progress Series}, volume = {292}, year = {2005}, note = {PI Plum Data}, pages = {75-83}, keywords = {acid phosphatase activity, estuary, inorganic nutrients, LTER-PIE, marsh sediment, primary production, salinity gradient}, doi = {10.3354/meps292075}, author = {Huang, X. and Morris, J.T.} } @article {PIE141, title = {Efficient export of carbon to the deep ocean through dissolved organic matter.}, journal = {Nature}, volume = {433}, year = {2005}, note = {PI Coastal}, pages = {142-145}, keywords = {carbon, dissolved organic matter, marine, LTER-PIE}, doi = {10.1038/nature03191}, author = {Hopkinson, C.S. and Vallino, J.} } @article {PIE154, title = {Estimating estuarine gross production, community respiration and net ecosystem production: A nonlinear inverse technique.}, journal = {Ecological Modeling}, volume = {187}, year = {2005}, note = {PI Plum Data}, pages = {281-296}, keywords = {community respiration, dissolved oxygen, estuarine metabolism, gross primary production, inverse modeling, LTER, LTER-PIE, primary production}, doi = {10.1016/j.ecolmodel.2004.10.018}, author = {Vallino, J. and Hopkinson, C.S. and Garritt, R.H.} } @article {PIE145, title = {Genotypic diversity within a natural coastal bacterioplankton population.}, journal = {Science}, volume = {307}, year = {2005}, note = {Collab Plum Data}, pages = {1311-1313}, keywords = {bacterioplankton, genome, LTER-PIE, Vibrio}, doi = {0.1126/science.1106028}, author = {Thompson, J.R. and Pacocha, S. and Pharino, C. and Klepac-Ceraj, V. and Hunt, D.E. and Benoit, J. and Sarma-Rupavtarm, R. and Distel, D.L. and Polz, M.F.} } @article {PIE147, title = {Molecular characterization of sulfate-reducing bacteria in a New England salt marsh.}, journal = {Environmental Microbiology}, volume = {7}, year = {2005}, note = {PI Plum Data}, pages = {1175-1185}, keywords = {bacteria, LTER-PIE, molecular, salt marsh, sulfate}, doi = {10.1111/j.1462-2920.2005.00796.x}, author = {Bahr, M. and Crump, B.C. and Klepac-Ceraj, V. and Teske, A.P. and Sogin, M.L. and Hobbie, J.E.} } @article {PIE156, title = {N retention in urbanizing headwater catchments}, journal = {Ecosystems}, volume = {8}, year = {2005}, note = {PI Plum Data}, pages = {871-884}, keywords = {export, impervious, inorganic nutrients, loading, LTER-PIE, nitrogen, residential, retention, urban, watershed}, doi = {10.1007/s10021-005-0178-3}, author = {Wollheim, W. and Pellerin, B. and Vorosmarty, C. and Hopkinson, C.} } @article {PIE146, title = {Relationships of land use and streamwater solute concentrations in the Ipswich River basin, northeastern Massachusetts.}, journal = {Water, Air, and Soil Pollution}, volume = {161}, year = {2005}, note = {PD Plum Data}, keywords = {land cover, land use, LTER-PIE, solute concentration, urbanization, watershed}, doi = {10.1007/s11270-005-2830-0}, author = {Williams, M. and Hopkinson, C. and Rastetter, E. and Vallino, J. and Claussens, L.} } @article {PIE240, title = {Spatial distribution of land type in regression models of pollutant loading}, journal = {Journal of Spatial Hydrology}, volume = {5}, number = {2}, year = {2005}, note = {Grad}, pages = {60-80}, keywords = {GIS, inorganic nutrients, LTER-PIE, non-point source pollution, nutrient export, regression modeling, spatial distribution}, doi = {10.1086/BBLv207n2p173}, author = {Fedorko, E.J. and Pontius, R.G., Jr. and Aldrich, S.P. and Claessens, L. and Hopkinson, C. and Wollheim, W.M.} } @article {PIE231, title = {Synchrony and seasonality in bacterioplankton communities of two temperate rivers}, journal = {Limnology and Oceanography}, volume = {50}, number = {6}, year = {2005}, note = {PI Plum Data}, pages = {1718-1729}, keywords = {16S rDNA, bacterial production, bacterioplankton, estuaries, LTER-PIE, population dynamics}, doi = {10.4319/lo.2005.50.6.1718}, author = {Crump, B.C. and Hobbie, J.E.} } @inbook {PIE124, title = {Estuarine respiration: an overview of benthic, pelagic, and whole system respiration }, booktitle = {Respiration in Aquatic Ecosystems}, year = {2004}, note = {PI Synthesis}, pages = {122-146}, publisher = {Academic Press}, organization = {Academic Press}, address = {New York, NY}, keywords = {benthic respiration, estuaries, LTER-PIE, organic matter, pelagic respiration, respiration rate, whole system respiration}, isbn = { 9780198527084}, doi = {10.1093/acprof:oso/9780198527084.003.0008}, author = {Hopkinson, C. and Smith, E.}, editor = {delGiorgio, P.A. and Williams, P.J.leB.} } @article {PIE119, title = {Fine-scale phylogenetic architecture of a complex bacterial community.}, journal = {Nature}, volume = {430}, year = {2004}, note = {Collab Plum Data}, pages = {551-554}, keywords = {bacteria, diversity, LTER-PIE}, doi = {10.1038/nature02649}, author = {Acinas, S.G. and Klepac-Ceraj, K. and Hunt, D.E. and Pharino, C. and Ceraj, C. and Distel, D.L. and Polz, M.F.} } @article {PIE126, title = {High overall diversity and dominance of microdiverse relationships in salt marsh sulfate-reducing bacteria.}, journal = {Environmental Microbiology}, volume = {6}, year = {2004}, note = {PI Plum Data}, pages = {686-698}, keywords = {bacteria, diversity, LTER-PIE, salt marsh, sulfur}, doi = {10.1111/j.1462-2920.2004.00600.x}, author = {Klepac-Ceraj, V. and Bahr, M. and Crump, B.C. and Teske, A.P. and Hobbie, J.E. and Poltz, M.F.} } @article {PIE120, title = {Isotopic investigation of nitrogen retention in a riparian ecosystem.}, journal = {Journal of Applied Ecology}, volume = {40}, number = {6}, year = {2004}, note = {PI Plum Data}, pages = {1035-1048}, keywords = {isotopes, LTER-PIE, nitrogen, riparian}, doi = {10.1111/j.1365-2664.2003.00854.x}, author = {Clement, J. and Holmes, R.M. and Peterson, B.J. and Pinlay, G.} } @article {PIE121, title = {Microbial biogeography along an estuarine salinity gradient: the combined influences of bacterial growth and residence time.}, journal = {Applied and Environmental Microbiology}, volume = {70}, year = {2004}, note = {PI Plum Data}, pages = {1494-1505}, keywords = {16S rDNA, bacteria, biogeography, disturbance, estuary, LTER-PIE, population dynamics}, doi = {10.1128/AEM.70.3.1494-1505.2004}, author = {Crump, B.C. and Hopkinson, C.S. and Sogin, M.L. and Hobbie, J.H.} } @article {PIE122, title = {Modeling Nitrogen Transport in the Ipswich River Basin, Massachusetts, Using HSPF.}, journal = {Journal of the American Water Resources Association}, volume = {40}, year = {2004}, note = {PD Plum Data}, pages = {1365-1384}, keywords = {HSPF, inorganic nutrients, LTER-PIE, nitrogen transport, watershed}, doi = {10.1111/j.1752-1688.2004.tb01592.x}, author = {Filoso,S. and Vallino, J.J and Hopkinson, C. and Rastetter, E. and Claessens, L.} } @article {PIE138, title = {N budgets and aquatic uptake in the Ipswich River basin, northeastern Massachusetts.}, journal = {Water Resources Research}, volume = {40}, number = {11}, year = {2004}, note = {PD Plum Data}, pages = {1-12}, keywords = {anthropogenic, land use, LTER-PIE, nitrogen, uptake, water quality}, doi = {10.1029/2004WR003172}, author = {Williams, M. and Hopkinson, C. and Rastetter, E. and Vallino, J.} } @article {PIE130, title = {Role of wetlands and developed land use on dissolved organic nitrogen concentrations and DON / TDN in northeastern U.S. rivers and streams}, journal = {Limnology and Oceanography}, volume = {49}, year = {2004}, note = {Grad}, pages = {910-918}, keywords = {dissolved organic nitrogen, land use, LTER-PIE, watershed, wetlands}, doi = {10.4319/lo.2004.49.4.0910}, author = {Pellerin, B.A. and Wollheim, W. and Hopkinson, C. and McDowell, W. and Williams, M. and Vorosmarty, C. and Daley, M.} } @proceedings {PIE149, title = {The Salt Marsh Geomorphology: Physical and Ecological Effects on Landform}, journal = {AGU Chapman Conference}, volume = {86}, year = {2004}, note = {PI Plum Data}, month = {October 9-13, 2004}, pages = {57-58}, publisher = {EOS}, address = {Halifax, Nova Scotia, Canada}, keywords = {disturbance, geomorphology, LTER-PIE, organic matter, salt marsh}, author = {Fagherazzi, S. and Torres, R. and Hopkinson, C. and vanProosdij, D.} } @article {PIE132, title = {Useful techniques of validation for spatially explicit land-change models.}, journal = {Ecological Modeling}, volume = {179}, year = {2004}, note = {PI Plum Data}, pages = {445-461}, keywords = {LTER-PIE, LUCC Model, Null Scale, prediction, Resolution, Validation}, doi = {10.1016/j.ecolmodel.2004.05.010}, author = {Pontius, R.G., Jr. and Huffaker, D. and Denman, K.} } @proceedings {PIE123, title = {What makes mummichogs grow? The relationship between growth rates and gut contents of Fundulus heteroclitus held in enclosures along a salinity gradient in a New England salt marsh.}, journal = {New England Estuarine Research Society (NEERS)}, year = {2004}, note = {Intern}, address = {Burlington, Vermont}, keywords = {LTER-PIE, mummichog, salt marsh}, author = {Freeman, C.J. and Haas, H. and Warren, S. and Deegan, L.A. and Logan, J.} } @article {PIE102, title = {Building a database of historic land cover to detect landscape change.}, journal = {Biological Bulletin}, volume = {205}, year = {2003}, note = {REU}, pages = {257-258}, keywords = {land use, landscape, LTER-PIE}, doi = {10.2307/1543283}, author = {Holden, M and Lippitt, C. and Pontius, R.G., Jr. and Williams, C.} } @article {PIE106, title = {Ecological Variability in Space and Time: Insights Gained from the US LTER Program }, journal = {BioSciences}, volume = {53}, number = {Special LTER Issue}, year = {2003}, note = {PI Synthesis}, pages = {57-67}, keywords = {long-term regional ecology, LTER-PIE, spatial variability, temporal variability}, doi = {10.1641/0006-3568(2003)053[0057:EVISAT]2.0.CO;2}, author = {Kratz, T.K. and Deegan, L.A. and Harmon, M.E. and Lauenroth, W.K.} } @article {PIE110, title = {Ecosystem modulation of dissolved carbon age in a temperate marsh dominated estuary.}, journal = {Ecosystems}, volume = {6}, year = {2003}, note = {PI/PD Plum Data}, pages = {694-705}, keywords = {carbon, estuary, LTER-PIE, marsh}, doi = {10.1007/s10021-002-0213-6}, author = {Raymond, P. A. and Hopkinson, C.S.} } @article {PIE109, title = {Estimating the uncertainty of land-cover extrapolations while constructing a raster map from tabular data.}, journal = {Journal of Gegraphical Systems}, volume = {5}, number = {3}, year = {2003}, note = {PI Synthesis}, pages = {253-273}, keywords = {GIS, land use, LTER-PIE, model validation}, doi = {10.1007/s10109-003-0109-9}, author = {Pontius, R.G., Jr. and Agrawal, A. and Huffaker, D.} } @article {PIE104, title = {Importance of metabolism in the development of salt marsh ponds.}, journal = {Biological Bulletin}, volume = {205}, year = {2003}, note = {REU}, pages = {248-249}, keywords = {LTER-PIE, metabolism, oxygen, salt marsh ponds}, doi = {10.2307/1543278}, author = {Johnston, M. E. and Cavatorta, J.R. and Hopkinson, C.S. and Valentine, V.} } @article {PIE95, title = {Nitrogen pollution in the northeastern United States: Sources, effects and managment options}, journal = {BioScience}, volume = {53}, year = {2003}, note = {PI Coastal}, pages = {357-374}, keywords = {disturbance, inorganic nutrients, LTER-PIE, nitrogen management, northeastern United States}, doi = {10.1641/0006-3568(2003)053[0357:NPITNU]2.0.CO;2}, author = {Driscoll, C. and Whitall, D. and Aber, J. and Boyer, E. and Castro, M. and Cronan, C. and Goodale, C. and Groffman, P. and Hopkinson, C. and Lambert, K. and Lawrence, G. and Ollinger, S.} } @article {PIE93, title = {Patterns of sedimentation in a salt marsh-dominated estuary.}, journal = {Biological Bulletin}, volume = {205}, year = {2003}, note = {REU}, pages = {239-241}, keywords = {estuary, LTER-PIE, salt marsh, sedimentation}, doi = {10.2307/1543274}, author = {Cavatorta, J. and Johnston, M. and Hopkinson, C.S. and Valentine, V.} } @article {PIE113, title = {Processing watershed-derived nitrogen in a well-flushed New England estuary.}, journal = {Limnology and Oceanography}, volume = {48}, number = {5}, year = {2003}, note = {PD Coastal}, pages = {1766-1778}, keywords = {estuary, LTER-PIE, nitrogen, watershed}, doi = {10.4319/lo.2003.48.5.1766}, author = {Tobias, C.R. and Cieri, M. and Peterson, B.J. and Deegan, L.A. and Vallino, J. and Hughes, J.} } @article {PIE118, title = {Rapid screening for freshwater bacterial groups using reverse line blot hybridization}, journal = {Applied Environmental Microbiology}, volume = {69}, year = {2003}, note = {PD Plum Data}, pages = {5875-5883}, keywords = {bacteria, freshwater, genome, LTER-PIE}, doi = {10.1128/AEM.69.10.5875-5883.2003}, author = {Zwart, G. and van Hannen, E.J. and Kamst-van Agerveld, M.P. and van der Gucht, K. and Lindstrom, E.S. and Van Wichelen, J. and Lauridsen, T. and Crump, B.C. and Han, S.K. and Declerck, S.} } @article {PIE108, title = {A (r)Ray of hope in analysis of function and diversity of microbial communities}, journal = {Biological Bulletin}, volume = {204}, year = {2003}, note = {Collab Plum Data}, pages = {196-199}, keywords = {estuary, genome, LTER-PIE, microbial communities}, doi = {10.2307/1543558}, author = {Poltz, M.F. and Bertilsson, S. and Acinas, S.G. and Hunt, D.} } @thesis {PIE103, title = {The scale at which land change models are accurate.}, volume = {B.S.}, year = {2003}, note = {Undergrad}, school = {Clark University}, type = {bachelorsthesis}, address = {Worcester}, keywords = {computer modelling, land use change, LTER-PIE}, author = {Huffaker, D.} } @article {PIE101, title = {Scientific accomplishments of the Long Term Ecological Research program: an introduction}, journal = {BioSciences}, volume = {53}, year = {2003}, note = {PI Synthesis}, pages = {17-20}, keywords = {long-term ecological research, LTER accomplishments, LTER description, LTER history, LTER network, LTER-PIE}, doi = {10.1641/0006-3568(2003)053[0017:SAOTLT]2.0.CO;2}, author = {Hobbie, J.E. and Carpenter, S.R. and Grimm, N.B. and Gosz, J.R. and Seastedt, T.R.} } @article {PIE100, title = {The United States Long Term Ecological Research program.}, journal = {BioSciences}, volume = {53}, year = {2003}, note = {PI Synthesis}, pages = {21-32}, keywords = {long-term ecological research, LTER accomplishments, LTER description, LTER history, LTER network, LTER-PIE}, doi = {10.1641/0006-3568(2003)053[0021:TULTER]2.0.CO;2}, author = {Hobbie, J. and Carpenter, S. and Grimm, N. and Gosz, J. and Seastedt, T.} } @article {PIE79, title = {Decomposition of dissolved organic matter from the continental margin}, journal = {Deep Sea Research II}, volume = {49}, year = {2002}, note = {PI Coastal}, pages = {4461-4478}, keywords = {decomposition, dissolved organic matter, LTER-PIE}, doi = {10.1016/S0967-0645(02)00125-X}, author = {Hopkinson, C.S. and Vallino, J. and Nolin, A.} } @mastersthesis {PIE78, title = {Identifying impermeable surface from remotely sensed images}, volume = {M.S.}, year = {2002}, note = {Grad}, school = {Clark University}, type = {mastersthesis}, address = {Worcester}, keywords = {LTER-PIE, remote sensing, watershed}, author = {Head, J.} } @article {PIE88, title = {A monitoring protocol to assess tidal restoration of salt marshes on local and regional scales}, journal = {Restoration Ecology}, volume = {10}, year = {2002}, note = {PI Coastal}, pages = {556-563}, keywords = {LTER-PIE, salt marsh restoration, tidal restrictions}, doi = {10.1046/j.1526-100X.2002.02033.x}, author = {Neckles, H. and Dionne, M. and Burdick, D. and Buchsbaum, R. and Diers, T. and Hutchins, E. and Roman, C.} } @techreport {PIE77, title = {Nitrogen Pollution: From sources to the sea.}, year = {2002}, note = {PI Coastal}, pages = {4 p.}, institution = {Science Links - Hubbard Brook Research Foundation}, address = {Hanover, NH}, keywords = {LTER-PIE, marine, nitrogen pollution, watershed}, author = {Driscoll, C. and Whitall, D. and Aber, J. and Boyer, E. and Castor, M. and Cronan, C. and Goodale, C. and Groffman, P. and Lambert, K. and Lawrence, G. and Hopkinson, C. and Ollinger, S.} } @article {PIE80, title = {Reconstruction of Historical Land Cover in the Ipswich Watershed.}, journal = {Biological Bulletin}, volume = {203}, year = {2002}, note = {REU}, pages = {253-254}, keywords = {Ipswich River, land use change, LTER-PIE, watershed}, doi = {10.2307/1543426}, author = {Huffaker, D. and Pontius, R.G., Jr.} } @article {PIE91, title = {Typical freshwater bacteria: an analysis of available 16S rRNA gene sequences from plankton of freshwater lakes and rivers.}, journal = {Aquatic Microbial Ecology}, volume = {28}, year = {2002}, note = {PD Plum Data}, pages = {141-155}, keywords = {16S rRNA, bacteria, genome, lakes, LTER-PIE, population dynamics, rivers}, doi = {10.3354/ame028141}, author = {Zwart, G. and Crump, B.C. and Kamst-van Agterveld, M.P. and Hagen, F. and Han, S.K.} } @proceedings {PIE90, title = {Uncertainty Analysis in Land Change Modeling: Constucting a Gridded Map from Tabular Data.}, journal = {The Second International Conference on Geographic Information Science}, year = {2002}, note = {PI Plum Data}, pages = {141-142}, address = {Boulder, CO}, keywords = {GIS, land use, LTER-PIE, model validation}, author = {Pontius, R.G., Jr. and Agrawal, A. and Huffaker, D.} } @article {PIE59, title = {Benthic metabolism and nutrient regeneration on the continental shelf off eastern Massachusetts, USA}, journal = {Marine Ecology Progress Series}, volume = {224}, year = {2001}, note = {PI Coastal}, pages = {1-19}, keywords = {benthic metabolism, LTER-PIE, nutrient regeneration}, doi = {10.3354/meps224001}, author = {Hopkinson, C. S. and Giblin, A.E. and Tucker, J.} } @thesis {PIE58, title = {The feeding ecology of mummichog and Atlantic silversides in the Rowley River.}, volume = {B.S.}, year = {2001}, note = {Undergrad}, school = {Conneticut College}, type = {bachelorsthesis}, keywords = {food web, LTER-PIE, mummichog, silverside}, author = {Haines, J.} } @thesis {PIE60, title = {Stable istopic analysis of food webs in hayed and reference salt marshes}, volume = {B.S.}, year = {2001}, note = {Undergrad}, school = {Hampshire College}, type = {bachelorsthesis}, keywords = {food web, LTER-PIE, salt marsh, stable isotope}, author = {Horowitz, J.} } @article {PIE54, title = {Variation in soil salinity associated with the expansion of Phragmites australis in salt marshes}, journal = {Environmental and Experimental Botany}, volume = {46}, year = {2001}, note = {PI Plum Data}, pages = {247-261}, keywords = {LTER-PIE, Phragmites, salinity, salt marsh}, doi = {10.1016/S0098-8472(01)00099-5}, author = {Burdick, D. and Buchsbaum, R. and Holt, E.} } @proceedings {PIE35, title = {Bird use of Phragmites australis in coastal marshes of northern Massachusetts.}, journal = {Proceedings of the 1st National Conference on Marine Bioinvasions}, volume = {Jan 24-27, 1999}, year = {2000}, note = {PI Plum Data}, pages = {232-240}, publisher = {MIT Sea Grant}, address = {Cambridge, MA}, keywords = {birds, coastal marsh, LTER-PIE, Phragmites}, author = {Holt, E. and Buchsbaum, R.}, editor = {J. Pederson} } @book {PIE36, title = {Clean Coastal Waters: Understanding and reducing the effects of nutrient pollution.}, series = {Ocean Studies Board and Water Science and Technology Board, Commission on Geosciences, Environment, and Resources, National Research Council.}, year = {2000}, note = {PI Synthesis}, publisher = {National Academy of Sciences}, organization = {National Academy of Sciences}, address = {Washington, DC}, keywords = {estuary, eutrophication, LTER-PIE, marine, nutrient}, author = {Howarth, R. W. and Anderson, D. and Church, T. and Greening, H. and Hopkinson, C. and Huber, W. and Marcus, N. and Naiman, R. and Segerson, K. and Sharpley, A. and Wiseman, W.}, editor = {Committee on the Causes and Management of Coastal Eutrophication} } @inbook {PIE44, title = {Effects of sea level anomalies on estuarine processes.}, booktitle = {Estuarine Science: A Synthetic Approach to Research and Practice}, year = {2000}, note = {PI Synthesis}, pages = {107-127}, publisher = {Island Press}, organization = {Island Press}, address = {Washington, DC}, keywords = {LTER-PIE, salt marsh, sea level, sediment accretion}, author = {Morris, J. T.}, editor = {J. Hobbie} } @book {PIE32, title = {Estuarine Science: A Synthetic Approach to Research and Practice}, year = {2000}, note = {PI Synthesis}, pages = {539}, publisher = {Island Press}, organization = {Island Press}, address = {Washington, DC}, keywords = {estuarine ecology, estuarine oceanography, LTER-PIE}, author = {Hobbie, J.} } @inbook {PIE33, title = {Estuarine Science: The key to progress in coastal ecological research}, booktitle = {Estuarine Science: A Synthetic Approach to Research and Practice}, year = {2000}, note = {PI Synthesis}, pages = {1-16}, publisher = {Island Press}, organization = {Island Press}, address = {Washington, DC}, keywords = {estuarine ecology, estuarine oceanography, LTER-PIE}, author = {Hobbie, J. E.}, editor = {J. Hobbie} } @inbook {PIE50, title = {Habitat-biotic interactions}, booktitle = {Estuarine Science: A Synthetic Approach to Research and Practice}, year = {2000}, note = {PI Synthesis}, pages = {427-460}, publisher = {Island Press}, organization = {Island Press}, address = {Washington, DC}, keywords = {estuary, food web, habitat, LTER-PIE}, author = {Simenstad, C. and Brandt, S. and Chalmers, A. and Dame, R. and Deegan, L. and Hodson, R. and Houde, E.}, editor = {J. Hobbie} } @inbook {PIE30, title = {Interaction between physical processes and ecosystem structure: A comparative approach.}, booktitle = {Estuarine Science: A Synthetic Approach to Research and Practice}, year = {2000}, note = {PI Synthesis}, pages = {177-206}, publisher = {Island Press}, organization = {Island Press}, address = {Washington, DC}, keywords = {estuarine ecology, estuarine oceanography, LTER-PIE}, author = {Geyer, W. R. and Morris, J. and Prahl, F. and Jay, D}, editor = {J. Hobbie} } @inbook {PIE40, title = {Linking biogeochemical processes to higher trophic levels}, booktitle = {Estuarine Science, A Synthetic Approach to Research and Practice}, year = {2000}, note = {PI Synthesis}, pages = {299-246}, publisher = {Island Press}, organization = {Island Press}, address = {Washington, DC}, keywords = {biogeochemical cycles, food web, LTER-PIE, trophic}, author = {Kremer, J. and Kemp, W. and Giblin, A. and Valiela, I. and Seitzinger, S. and Hoffman, E.}, editor = {J. Hobbie} } @inbook {PIE52, title = {Macro-scale models of water and nutrient flux to the coastal zone}, booktitle = {Estuarine Science: A Synthetic Approach to Research and Practice}, year = {2000}, note = {PI Synthesis}, pages = {43-80}, publisher = {Island Press}, organization = {Island Press}, address = {Washington, DC}, keywords = {coast, LTER-PIE, model, nutrient, water}, author = {Vorosmarty, C. and Peterson, B.}, editor = {J. Hobbie} } @techreport {PIE26, title = {Marine and Estuarine Ecosystem and Habitat Classification}, year = {2000}, note = {PI Synthesis}, institution = {US Department of Commerce, National Oceanic and Atmospheric Administration, National marine Fisheries Service}, keywords = {classification, ecosystem, estuary, habitat, LTER-PIE}, isbn = {NOAA Technical Memorandum NMFS-FSPO-43}, author = {Allee, R.J. and Dethier, M. and Brown, D. and Deegan, L. and Ford, R.G. and Hourigan, T.F. and Maragos, J. and Schoch, C. and Sealey, K. and Twilley, R. and Weinstein, M.P. and Yoklavich, M.} } @article {PIE34, title = {Nitrogen biogeochemistry in the oligohaline zone of a New England estuary.}, journal = {Ecology}, volume = {81}, number = {2}, year = {2000}, note = {PD Plum Data}, pages = {416-432}, keywords = {15N, Actinocyclus normanii, diatoms, estuary, inorganic nutrients, land-margin ecosystem, LTER-PIE, nitrogen cycling, oligohaline zone, organic matter, phytoplankton, primary production, silica, stable isotopes, terrestrial-aquatic linkage}, doi = {10.2307/177437}, author = {Holmes, R. M. and Peterson, B.J. and Deegan, L. and Hughes, J. and Fry, B.} } @article {PIE38, title = {Nitrogen flow through the food web in the oligohaline zone of a New England estuary.}, journal = {Ecology}, volume = {81}, year = {2000}, note = {PD Plum Data}, pages = {433-452}, keywords = {15N-tracer, Actinocyclus normanii, benthivore, copepod, detritus, diatoms, disturbance, food web, inorganic nutrients, intertidal, LTER-PIE, macrofauna, nitrogen, oligohaline zone, planktivore, population dynamics, primary production}, doi = {10.2307/177438}, author = {Hughes, J. E. and Deegan, L.A. and Peterson, B.J. and Holmes, R.M. and Fry, B.} } @article {PIE37, title = {Nutrient pollution of coastal rivers, bays and seas}, journal = {Issues in Ecology}, number = {7}, year = {2000}, note = {PI Coastal}, pages = {1-15}, keywords = {estuary, LTER-PIE, nutrient pollution}, author = {Howarth, R.W. and Anderson, D. and Cloern, J. and Elfring, C. and Hopkinson, C. and Lapointe, B. and Malone, T. and Marcus, N. and McGlathery, K. and Sharpley, A. and Walker, D.} } @inbook {PIE28, title = {Salt marsh ecosystem support of marine transient species.}, booktitle = {Concepts and Controversies in Tidal Marsh Ecology}, year = {2000}, note = {PI Synthesis}, pages = {333-365}, publisher = {Kluwer Academic Publisher, The Netherlands}, organization = {Kluwer Academic Publisher, The Netherlands}, keywords = {ecosystem, LTER-PIE, marine, salt marsh}, author = {Deegan, L. A. and Hughes, J.E. and Rountree, R.A.}, editor = {M. Weinstein and J. Kreeger} } @inbook {PIE46, title = {Scenarios of land-use change and nitrogen release in the Ipswich watershed, Massachusetts, USA}, booktitle = {Proceedings of the 4th International Conference on Integrating Geographic Information Systems and Environmental Modeling: Problems, prospects, and Needs for Research}, year = {2000}, note = {PI Plum Data}, publisher = {Cooperative Institute for Research in Environmental Science}, organization = {Cooperative Institute for Research in Environmental Science}, address = {Boulder, CO}, keywords = {land use change, LTER-PIE, nitrogen}, author = {Pontius, R.G., Jr. and Claessens, L. and Hopkinson, C. and Marzouk, A. and Rastetter, E.B. and Schneider, L.C. and Vallino, J.}, editor = {B. O. Parks and K. M. Clarke and M. P. Crane} } @inbook {PIE29, title = {Synthesizing drainage basin inputs to coastal systems.}, booktitle = {Estuarine Science: A Synthetic Approach to Research and Practice}, year = {2000}, note = {PI Synthesis}, pages = {81-105}, publisher = {Island Press}, organization = {Island Press}, address = {Washington, DC}, keywords = {LTER-PIE, watershed}, author = {Fisher, T. R. and Correll, D. and Costanza, R. and Hollibaugh, J. and Hopkinson, C. and Howarth, R. and Rabalais, N. and Richey, J. and Vorosmarty, C. and Wiegert, R.}, editor = {J. Hobbie} } @article {PIE16, title = {Benthic metabolism and nutrient cycling along an estuarine salinity gradient.}, journal = {Estuaries}, volume = {22}, number = {4}, year = {1999}, note = {PI Plum Data}, pages = {825-843}, keywords = {benthic metabolism, estuary, LTER-PIE}, doi = {10.2307/1353067}, author = {Hopkinson, C. S. and Giblin, A.E. and Tucker, J. and Garritt, R.H.} } @techreport {PIE14, title = {Establishing the Food Web Links between Estuaries and Nearshore Fisheries of New England}, year = {1999}, note = {PI Plum Data}, pages = {26}, institution = {NOAA}, keywords = {estuary, fisheries, food web, LTER-PIE}, isbn = {Final Report NA 76 FD 0106}, author = {Deegan, L. and Wright, L.A. and Hughes, J. and Boynton, E.} } @article {PIE22, title = {Ipswich River nutrient dynamics: Preliminary assessment of a simple nitrogen-processing model}, journal = {Biological Bulletin}, volume = {197}, year = {1999}, note = {REU}, pages = {289-290}, keywords = {Ipswich River, land use, LTER-PIE, modeling, nutrient dynamics}, doi = {10.2307/1542657}, author = {Pease, K. M. and Claessens, L. and Hopkinson, C. and Rastetter, E. and Vallino, J. and Kilham, N.} } @article {PIE13, title = {Long-term effect of municipal water use on the water budget of the Ipswich River basin}, journal = {Biological Bulletin}, volume = {197}, year = {1999}, note = {REU}, pages = {295-297}, keywords = {Ipswich, LTER-PIE, municipal, rivers, water, water usage}, doi = {10.2307/1542661}, author = {Canfield, S. and Claessens, L. and Hopkinson, C.S. and Rastetter, E. and Vallino, J.} } @proceedings {PIE24, title = {A non-linear inverse technique to estimate estuarine ecosystem metabolism from whole system oxygen measurements.}, journal = {Proceedings of the 3rd International Symposium on Ecohydraulics}, year = {1999}, note = {PI Plum Data}, month = {July, 1999}, address = {Salt Lake City, UT}, keywords = {estuary, LTER-PIE, metabolism, model, oxygen}, author = {Vallino, J. and Hopkinson, C.S. and Garritt, R. and Tucker, J.} } @article {, title = {A simple and precise method for measuring ammonium in marine and freshwater ecosystems}, journal = {Canadian Journal of Fisheries and Aquatic Science}, volume = {56}, year = {1999}, note = {PD Plum Data}, pages = {1801-1808}, keywords = {ammonium, estuarine, freshwater, LTER-PIE, marine}, doi = {10.1139/f99-128}, author = {Holmes, R. M. and Aminot, A. and Kerouel, R. and Hooker, B.A. and Peterson, B.J.} } @article {PIE2, title = {13C/12C composition of marine dissolved organic carbon.}, journal = {Chemical Geology}, volume = {152}, year = {1998}, note = {PI Coastal}, pages = {113 - 118}, keywords = {dissolved organic carbon, marine, organic matter, PIE LMER, sedimentary organic material, stable isotopes}, doi = {10.1016/S0009-2541(98)00100-4}, author = {Fry, B. and Hopkinson, C. and Nolin, A. and Wainright, S.} } @article {PIE9, title = {Estimation of dispersion and characteristic mixing times in Plum Island Sound Estuary}, journal = {Estuarine, Coastal and Shelf Science}, volume = {46}, year = {1998}, note = {PI Plum Data}, pages = {333-350}, keywords = {average age, average esidence time, average transit time, dispersion, estuary, LTER-PIE, Massachusetts coast, tidal prism}, doi = {10.1006/ecss.1997.0281}, author = {Vallino, J. J. and Hopkinson, C.S.} } @article {PIE5, title = {Influence of the benthos on growth of planktonic estuarine bacteria }, journal = {Aquatic Microbial Ecology}, volume = {16}, year = {1998}, note = {PI Plum Data}, pages = {109-118}, keywords = {bacteria, bacterial growth, dissolved organic matter, DOC, DON, estuarine sediments, LTER-PIE, organic matter}, doi = {10.3354/ame016109}, author = {Hopkinson, C. S. and Giblin, A.E. and Garritt, R.H. and Tucker, J. and Hullar, M.A.J.} } @article {PIE3, title = {Measuring 15N-NH4 in marine, estuarine, and freshwaters: an adaptation of the ammonium diffusion method for samples with low ammonium concentrations.}, journal = {Marine Chemistry}, volume = {60}, year = {1998}, note = {PI Coastal}, pages = {235-243}, keywords = {ammonium, analytical methods, diffusion, estuarine, fresh water, inorganic nutrients, N-15, PIE LMER, sea water}, doi = {10.1016/S0304-4203(97)00099-6}, author = {Holmes, R.M. and McClelland, J. and Sigman, D.M. and Fry, B. and Peterson, B.J.} } @article {PIE7, title = {A preliminary evaluation of sedimentation rates and species distribution in Plum Island estuary, Massachusetts}, journal = {Biological Bulletin}, volume = {195}, year = {1998}, note = {REU}, pages = {232-233}, keywords = {estuary, LTER-PIE, organic matter, salt marsh, sedimentation}, doi = {10.2307/1542855}, author = {Schmitt, C. and Weston, N.B. and Hopkinson, C.} } @article {PIE4, title = {Terrestrial inputs of organic matter to coastal ecosystems: An intercomparison of chemical characteristics and bioavailability}, journal = {Biogeochemistry}, volume = {43}, year = {1998}, note = {PI Plum LMER Data}, pages = {211-234}, keywords = {elemental composition, lability, organic carbon, organic matter, organic nitrogen, PIE LMER, rivers}, doi = {10.1023/A:1006016030299}, author = {Hopkinson, C. S. and Buffam, I. and Hobbie, J. and Vallino, J. and Perdue, M. and Eversmeyer, B. and Prahl, F. and Covert, J. and Hodson, R. and Moran, M.A. and Smith, E. and Baross, J. and Crump, B. and Findlay, S. and Foreman, K.} }